RNA–Protein interactions for RNA: ENST00000443700.5

AP1S3-206, Transcript of adaptor related protein complex 1 subunit sigma 3, humanhuman

TSL 1 (best) BASIC

Gene AP1S3, Length 1,785 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S3-206ENST00000443700 RRP1P56182 461 aaKnown RBP20.65■□□□□ 0.9
AP1S3-206ENST00000443700 PDE3BQ13370 1112 aa20.64■□□□□ 0.9
AP1S3-206ENST00000443700 INSRP06213 1382 aa20.64■□□□□ 0.89
AP1S3-206ENST00000443700 CNGB1Q14028 1251 aaPredicted RBP20.64■□□□□ 0.89
AP1S3-206ENST00000443700 DNAJC5BQ9UF47 199 aa20.64■□□□□ 0.89
AP1S3-206ENST00000443700 ZBTB47Q9UFB7 747 aaPredicted RBP20.63■□□□□ 0.89
AP1S3-206ENST00000443700 NUP160Q12769 1436 aa20.62■□□□□ 0.89
AP1S3-206ENST00000443700 PAK3O75914 559 aaPredicted RBP20.62■□□□□ 0.89
AP1S3-206ENST00000443700 PARD3Q8TEW0 1356 aa20.61■□□□□ 0.89
AP1S3-206ENST00000443700 EIF2AK4Q9P2K8 1649 aaKnown RBP20.61■□□□□ 0.89
AP1S3-206ENST00000443700 TCERG1O14776 1098 aaKnown RBP20.61■□□□□ 0.89
AP1S3-206ENST00000443700 FAM135AQ9P2D6 1515 aa20.61■□□□□ 0.89
AP1S3-206ENST00000443700 ST20-MTHFSA0A0A6YYL1 179 aa20.6■□□□□ 0.89
AP1S3-206ENST00000443700 TSPY4P0CV99 314 aa20.6■□□□□ 0.89
AP1S3-206ENST00000443700 TSPY10P0CW01 314 aa20.6■□□□□ 0.89
AP1S3-206ENST00000443700 RTL5Q5HYW3 569 aaPredicted RBP20.6■□□□□ 0.89
AP1S3-206ENST00000443700 NLRP13Q86W25 1043 aa20.6■□□□□ 0.89
AP1S3-206ENST00000443700 PLEKHD1A6NEE1 506 aa20.59■□□□□ 0.89
AP1S3-206ENST00000443700 PREX2Q70Z35 1606 aa20.59■□□□□ 0.89
AP1S3-206ENST00000443700 UNC13BO14795 1591 aa20.59■□□□□ 0.89
AP1S3-206ENST00000443700 CCDC141Q6ZP82 1450 aa20.59■□□□□ 0.89
AP1S3-206ENST00000443700 PLEKHH2Q8IVE3 1493 aa20.59■□□□□ 0.89
AP1S3-206ENST00000443700 PRAG1Q86YV5 1406 aa20.58■□□□□ 0.88
AP1S3-206ENST00000443700 NBR1Q14596 966 aa20.57■□□□□ 0.88
AP1S3-206ENST00000443700 RCAN3Q9UKA8 241 aa20.57■□□□□ 0.88
AP1S3-206ENST00000443700 COL17A1Q9UMD9 1497 aaPredicted RBP20.56■□□□□ 0.88
AP1S3-206ENST00000443700 MAST1Q9Y2H9 1570 aa20.56■□□□□ 0.88
AP1S3-206ENST00000443700 ATP10BO94823 1461 aa20.56■□□□□ 0.88
AP1S3-206ENST00000443700 PRDM15P57071 1507 aaPredicted RBP20.56■□□□□ 0.88
AP1S3-206ENST00000443700 MYO5CQ9NQX4 1742 aa20.55■□□□□ 0.88
AP1S3-206ENST00000443700 DCAF11Q8TEB1 546 aa20.55■□□□□ 0.88
AP1S3-206ENST00000443700 CHMP7Q8WUX9 453 aaPredicted RBP20.55■□□□□ 0.88
AP1S3-206ENST00000443700 WASHC2CQ9Y4E1 1318 aa20.55■□□□□ 0.88
AP1S3-206ENST00000443700 GPRASP1Q5JY77 1395 aa20.55■□□□□ 0.88
AP1S3-206ENST00000443700 CCDC144AA2RUR9 1427 aa20.55■□□□□ 0.88
AP1S3-206ENST00000443700 SAMD9LQ8IVG5 1584 aa20.54■□□□□ 0.88
AP1S3-206ENST00000443700 MS4A1P11836 297 aa20.54■□□□□ 0.88
AP1S3-206ENST00000443700 BLMP54132 1417 aaPredicted RBP20.53■□□□□ 0.88
AP1S3-206ENST00000443700 KDM2AQ9Y2K7 1162 aa20.53■□□□□ 0.88
AP1S3-206ENST00000443700 CDC42BPBQ9Y5S2 1711 aa20.53■□□□□ 0.88
AP1S3-206ENST00000443700 EXOC6Q8TAG9 804 aa20.51■□□□□ 0.87
AP1S3-206ENST00000443700 IQGAP3Q86VI3 1631 aa20.5■□□□□ 0.87
AP1S3-206ENST00000443700 RSPH4AQ5TD94 716 aa20.49■□□□□ 0.87
AP1S3-206ENST00000443700 JPH4Q96JJ6 628 aa20.49■□□□□ 0.87
AP1S3-206ENST00000443700 PLXNC1O60486 1568 aa20.49■□□□□ 0.87
AP1S3-206ENST00000443700 RNF17Q9BXT8 1623 aaKnown RBP20.48■□□□□ 0.87
AP1S3-206ENST00000443700 A2MP01023 1474 aa20.46■□□□□ 0.87
AP1S3-206ENST00000443700 PDE4AP27815 886 aa20.44■□□□□ 0.86
AP1S3-206ENST00000443700 SENP3-EIF4A1A0A087X0R7 540 aa20.43■□□□□ 0.86
AP1S3-206ENST00000443700 BACH2Q9BYV9 841 aa20.43■□□□□ 0.86
AP1S3-206ENST00000443700 USP35Q9P2H5 1018 aa20.43■□□□□ 0.86
AP1S3-206ENST00000443700 ERBINQ96RT1 1412 aa20.43■□□□□ 0.86
AP1S3-206ENST00000443700 PER1O15534 1290 aaPredicted RBP20.42■□□□□ 0.86
AP1S3-206ENST00000443700 ERCC6Q03468 1493 aa20.42■□□□□ 0.86
AP1S3-206ENST00000443700 HNRNPMP52272 730 aaKnown RBP eCLIP20.41■□□□□ 0.86
AP1S3-206ENST00000443700 SYCP2Q9BX26 1530 aa20.41■□□□□ 0.86
AP1S3-206ENST00000443700 ATP10AO60312 1499 aa20.4■□□□□ 0.86
AP1S3-206ENST00000443700 DDRGK1Q96HY6 314 aa20.39■□□□□ 0.86
AP1S3-206ENST00000443700 NPM2Q86SE8 214 aaKnown RBP20.39■□□□□ 0.85
AP1S3-206ENST00000443700 MAGI2Q86UL8 1455 aa20.38■□□□□ 0.85
AP1S3-206ENST00000443700 DISP3Q9P2K9 1392 aa20.38■□□□□ 0.85
AP1S3-206ENST00000443700 PPM1GO15355 546 aaPredicted RBP20.38■□□□□ 0.85
AP1S3-206ENST00000443700 PLA2R1Q13018 1463 aa20.38■□□□□ 0.85
AP1S3-206ENST00000443700 FBLN2P98095 1184 aa20.37■□□□□ 0.85
AP1S3-206ENST00000443700 DUOX2Q9NRD8 1548 aa20.37■□□□□ 0.85
AP1S3-206ENST00000443700 CLASP1Q7Z460 1538 aa20.36■□□□□ 0.85
AP1S3-206ENST00000443700 TMF1P82094 1093 aa20.36■□□□□ 0.85
AP1S3-206ENST00000443700 ARHGAP5Q13017 1502 aa20.36■□□□□ 0.85
AP1S3-206ENST00000443700 SALL2Q9Y467 1007 aaPredicted RBP20.36■□□□□ 0.85
AP1S3-206ENST00000443700 IQGAP1P46940 1657 aa20.36■□□□□ 0.85
AP1S3-206ENST00000443700 TESK2Q96S53 571 aa20.34■□□□□ 0.85
AP1S3-206ENST00000443700 TTC37Q6PGP7 1564 aa20.34■□□□□ 0.85
AP1S3-206ENST00000443700 SYNMO15061 1565 aa20.33■□□□□ 0.85
AP1S3-206ENST00000443700 NBPF1Q3BBV0 1214 aa20.32■□□□□ 0.84
AP1S3-206ENST00000443700 CDCA7LQ96GN5 454 aa20.32■□□□□ 0.84
AP1S3-206ENST00000443700 CC2D1BQ5T0F9 858 aaKnown RBP20.31■□□□□ 0.84
AP1S3-206ENST00000443700 CRBNQ96SW2 442 aa20.31■□□□□ 0.84
AP1S3-206ENST00000443700 PANK3Q9H999 370 aa20.31■□□□□ 0.84
AP1S3-206ENST00000443700 MADDQ8WXG6 1647 aa20.31■□□□□ 0.84
AP1S3-206ENST00000443700 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.29■□□□□ 0.84
AP1S3-206ENST00000443700 RGL3Q3MIN7 710 aa20.29■□□□□ 0.84
AP1S3-206ENST00000443700 SPHKAPQ2M3C7 1700 aa20.29■□□□□ 0.84
AP1S3-206ENST00000443700 NEFMP07197 916 aa20.29■□□□□ 0.84
AP1S3-206ENST00000443700 CEP152O94986 1710 aa20.27■□□□□ 0.83
AP1S3-206ENST00000443700 CENPQQ7L2Z9 268 aaPredicted RBP20.26■□□□□ 0.83
AP1S3-206ENST00000443700 GOLGA6L2Q8N9W4 650 aaPredicted RBP20.26■□□□□ 0.83
AP1S3-206ENST00000443700 WDR7Q9Y4E6 1490 aa20.25■□□□□ 0.83
AP1S3-206ENST00000443700 PLIN1O60240 522 aa20.24■□□□□ 0.83
AP1S3-206ENST00000443700 LAS1LQ9Y4W2 734 aaKnown RBP20.24■□□□□ 0.83
AP1S3-206ENST00000443700 KDM2BQ8NHM5 1336 aa20.24■□□□□ 0.83
AP1S3-206ENST00000443700 EIF3AQ14152 1382 aaKnown RBP20.24■□□□□ 0.83
AP1S3-206ENST00000443700 WDR43Q15061 677 aaKnown RBP eCLIP20.23■□□□□ 0.83
AP1S3-206ENST00000443700 PIK3C2GO75747 1445 aa20.23■□□□□ 0.83
AP1S3-206ENST00000443700 CDCA8Q53HL2 280 aa20.23■□□□□ 0.83
AP1S3-206ENST00000443700 ASXL1Q8IXJ9 1541 aa20.23■□□□□ 0.83
AP1S3-206ENST00000443700 MYOM1P52179 1685 aa20.22■□□□□ 0.83
AP1S3-206ENST00000443700 TRPM2O94759 1503 aa20.21■□□□□ 0.83
AP1S3-206ENST00000443700 ABCC2Q92887 1545 aa20.21■□□□□ 0.83
AP1S3-206ENST00000443700 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.21■□□□□ 0.83
AP1S3-206ENST00000443700 KIAA1210Q9ULL0 1709 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms