RNA–Protein interactions for RNA: ENST00000439986.8

CCBE1-202, Transcript of collagen and calcium binding EGF domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCBE1, Length 6,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-202ENST00000439986 RRBP1Q9P2E9 1410 aaKnown RBP14.53□□□□□ -0.08
CCBE1-202ENST00000439986 PAK3O75914 559 aaPredicted RBP14.52□□□□□ -0.08
CCBE1-202ENST00000439986 GOLGA6L1Q8N7Z2 621 aa14.52□□□□□ -0.08
CCBE1-202ENST00000439986 RRP1P56182 461 aaKnown RBP14.52□□□□□ -0.09
CCBE1-202ENST00000439986 MYBBP1AQ9BQG0 1328 aaKnown RBP14.51□□□□□ -0.09
CCBE1-202ENST00000439986 MS4A1P11836 297 aa14.51□□□□□ -0.09
CCBE1-202ENST00000439986 KIF15Q9NS87 1388 aa14.5□□□□□ -0.09
CCBE1-202ENST00000439986 PRM3Q9NNZ6 103 aa14.5□□□□□ -0.09
CCBE1-202ENST00000439986 ARAP1Q96P48 1450 aa14.49□□□□□ -0.09
CCBE1-202ENST00000439986 ANKRD30AQ9BXX3 1397 aa14.49□□□□□ -0.09
CCBE1-202ENST00000439986 ST20-MTHFSA0A0A6YYL1 179 aa14.49□□□□□ -0.09
CCBE1-202ENST00000439986 PLIN1O60240 522 aa14.49□□□□□ -0.09
CCBE1-202ENST00000439986 SLC4A3P48751 1232 aa14.48□□□□□ -0.09
CCBE1-202ENST00000439986 WASHC2AQ641Q2 1341 aa14.48□□□□□ -0.09
CCBE1-202ENST00000439986 GZF1Q9H116 711 aaPredicted RBP14.48□□□□□ -0.09
CCBE1-202ENST00000439986 MSNP26038 577 aaKnown RBP14.48□□□□□ -0.09
CCBE1-202ENST00000439986 CCDC7Q96M83 1385 aa14.47□□□□□ -0.09
CCBE1-202ENST00000439986 IGF1RP08069 1367 aa14.47□□□□□ -0.09
CCBE1-202ENST00000439986 UACAQ9BZF9 1416 aa14.47□□□□□ -0.09
CCBE1-202ENST00000439986 LRRC9Q6ZRR7 1453 aa14.47□□□□□ -0.09
CCBE1-202ENST00000439986 MORC1Q86VD1 984 aa14.47□□□□□ -0.09
CCBE1-202ENST00000439986 GTF3C5Q9Y5Q8 519 aaPredicted RBP14.47□□□□□ -0.09
CCBE1-202ENST00000439986 CADPSQ9ULU8 1353 aa14.46□□□□□ -0.09
CCBE1-202ENST00000439986 CHAF1AQ13111 956 aaPredicted RBP14.46□□□□□ -0.09
CCBE1-202ENST00000439986 USP47Q96K76 1375 aa14.46□□□□□ -0.09
CCBE1-202ENST00000439986 SSR1P43307 286 aaKnown RBP14.46□□□□□ -0.09
CCBE1-202ENST00000439986 RTF1Q92541 710 aaKnown RBP14.46□□□□□ -0.09
CCBE1-202ENST00000439986 CNTLNQ9NXG0 1405 aa14.46□□□□□ -0.09
CCBE1-202ENST00000439986 GSE1Q14687 1217 aa14.46□□□□□ -0.09
CCBE1-202ENST00000439986 FGD6Q6ZV73 1430 aa14.46□□□□□ -0.1
CCBE1-202ENST00000439986 MCCP23508 829 aa14.45□□□□□ -0.1
CCBE1-202ENST00000439986 ZNF592Q92610 1267 aa14.45□□□□□ -0.1
CCBE1-202ENST00000439986 KIF7Q2M1P5 1343 aa14.45□□□□□ -0.1
CCBE1-202ENST00000439986 TAF3Q5VWG9 929 aa14.45□□□□□ -0.1
CCBE1-202ENST00000439986 NRDCO43847 1150 aa14.44□□□□□ -0.1
CCBE1-202ENST00000439986 CHMP3Q9Y3E7 222 aa14.44□□□□□ -0.1
CCBE1-202ENST00000439986 CSB-PGBD3P0DP91 1061 aa14.44□□□□□ -0.1
CCBE1-202ENST00000439986 NOL8Q76FK4 1167 aaKnown RBP14.43□□□□□ -0.1
CCBE1-202ENST00000439986 CRBNQ96SW2 442 aa14.43□□□□□ -0.1
CCBE1-202ENST00000439986 NOC3LQ8WTT2 800 aaKnown RBP14.43□□□□□ -0.1
CCBE1-202ENST00000439986 RWDD1Q9H446 243 aaPredicted RBP14.42□□□□□ -0.1
CCBE1-202ENST00000439986 FOXD4L1Q9NU39 408 aa14.42□□□□□ -0.1
CCBE1-202ENST00000439986 WDR70Q9NW82 654 aa14.42□□□□□ -0.1
CCBE1-202ENST00000439986 FAM161AQ3B820 660 aa14.42□□□□□ -0.1
CCBE1-202ENST00000439986 CENPQQ7L2Z9 268 aaPredicted RBP14.42□□□□□ -0.1
CCBE1-202ENST00000439986 SYNJ1O43426 1573 aa14.42□□□□□ -0.1
CCBE1-202ENST00000439986 CCDC146Q8IYE0 955 aa14.42□□□□□ -0.1
CCBE1-202ENST00000439986 CHMP4BQ9H444 224 aaKnown RBP14.42□□□□□ -0.1
CCBE1-202ENST00000439986 CREBRFQ8IUR6 639 aa14.42□□□□□ -0.1
CCBE1-202ENST00000439986 ERCC6Q03468 1493 aa14.41□□□□□ -0.1
CCBE1-202ENST00000439986 SETQ01105 290 aaPredicted RBP14.41□□□□□ -0.1
CCBE1-202ENST00000439986 ITPRIPQ8IWB1 547 aa14.41□□□□□ -0.1
CCBE1-202ENST00000439986 AXDND1Q5T1B0 1012 aaPredicted RBP14.4□□□□□ -0.1
CCBE1-202ENST00000439986 GOLGA6L3A6NEY3 463 aa14.4□□□□□ -0.1
CCBE1-202ENST00000439986 NUTM2DQ5VT03 806 aaPredicted RBP14.4□□□□□ -0.1
CCBE1-202ENST00000439986 GGT6Q6P531 493 aa14.39□□□□□ -0.11
CCBE1-202ENST00000439986 FAM193AP78312 1265 aa14.39□□□□□ -0.11
CCBE1-202ENST00000439986 ERICH3Q5RHP9 1530 aa14.39□□□□□ -0.11
CCBE1-202ENST00000439986 KCTD17Q8N5Z5 321 aa14.39□□□□□ -0.11
CCBE1-202ENST00000439986 PMFBP1Q8TBY8 1022 aa14.39□□□□□ -0.11
CCBE1-202ENST00000439986 PANK3Q9H999 370 aa14.39□□□□□ -0.11
CCBE1-202ENST00000439986 WDR78Q5VTH9 848 aa14.38□□□□□ -0.11
CCBE1-202ENST00000439986 MYOM3Q5VTT5 1437 aa14.38□□□□□ -0.11
CCBE1-202ENST00000439986 KIAA2012Q0VF49 1180 aa14.38□□□□□ -0.11
CCBE1-202ENST00000439986 KIAA1211Q6ZU35 1233 aa14.38□□□□□ -0.11
CCBE1-202ENST00000439986 CLUAP1Q96AJ1 413 aa14.38□□□□□ -0.11
CCBE1-202ENST00000439986 MFAP1P55081 439 aaKnown RBP14.37□□□□□ -0.11
CCBE1-202ENST00000439986 FBXW7Q969H0 707 aa14.37□□□□□ -0.11
CCBE1-202ENST00000439986 GBP4Q96PP9 640 aa14.37□□□□□ -0.11
CCBE1-202ENST00000439986 CENPJQ9HC77 1338 aaPredicted RBP14.37□□□□□ -0.11
CCBE1-202ENST00000439986 CLGNO14967 610 aa14.37□□□□□ -0.11
CCBE1-202ENST00000439986 WDR97A6NE52 1622 aa14.37□□□□□ -0.11
CCBE1-202ENST00000439986 FOXD4L5Q5VV16 416 aaPredicted RBP14.36□□□□□ -0.11
CCBE1-202ENST00000439986 GPATCH11Q8N954 259 aa14.36□□□□□ -0.11
CCBE1-202ENST00000439986 FOXD4L4Q8WXT5 416 aaPredicted RBP14.36□□□□□ -0.11
CCBE1-202ENST00000439986 U2AF1L5P0DN76 240 aaPredicted RBP14.36□□□□□ -0.11
CCBE1-202ENST00000439986 HNRNPMP52272 730 aaKnown RBP eCLIP14.36□□□□□ -0.11
CCBE1-202ENST00000439986 U2AF1Q01081 240 aaKnown RBP eCLIP14.36□□□□□ -0.11
CCBE1-202ENST00000439986 KANK1Q14678 1352 aa14.35□□□□□ -0.11
CCBE1-202ENST00000439986 PAIP2Q9BPZ3 127 aaKnown RBP14.35□□□□□ -0.11
CCBE1-202ENST00000439986 MSH5O43196 834 aa14.35□□□□□ -0.11
CCBE1-202ENST00000439986 PRXQ9BXM0 1461 aa14.34□□□□□ -0.11
CCBE1-202ENST00000439986 TRIM6-TRIM34B2RNG4 842 aa14.34□□□□□ -0.11
CCBE1-202ENST00000439986 GORABQ5T7V8 394 aa14.34□□□□□ -0.11
CCBE1-202ENST00000439986 IRX3P78415 501 aaPredicted RBP14.33□□□□□ -0.11
CCBE1-202ENST00000439986 CCDC184Q52MB2 194 aa14.33□□□□□ -0.11
CCBE1-202ENST00000439986 IPO8O15397 1037 aaKnown RBP14.33□□□□□ -0.12
CCBE1-202ENST00000439986 PAF1Q8N7H5 531 aa14.33□□□□□ -0.12
CCBE1-202ENST00000439986 CARMIL2Q6F5E8 1435 aa14.32□□□□□ -0.12
CCBE1-202ENST00000439986 FGD5Q6ZNL6 1462 aa14.32□□□□□ -0.12
CCBE1-202ENST00000439986 VPS53Q5VIR6 699 aa14.32□□□□□ -0.12
CCBE1-202ENST00000439986 SLC4A10Q6U841 1118 aa14.31□□□□□ -0.12
CCBE1-202ENST00000439986 AKNAQ7Z591 1439 aa14.31□□□□□ -0.12
CCBE1-202ENST00000439986 BBXQ8WY36 941 aaPredicted RBP14.31□□□□□ -0.12
CCBE1-202ENST00000439986 NUTM2FA1L443 756 aa14.31□□□□□ -0.12
CCBE1-202ENST00000439986 G3V3G9 751 aa14.31□□□□□ -0.12
CCBE1-202ENST00000439986 DCAF8Q5TAQ9 597 aa14.31□□□□□ -0.12
CCBE1-202ENST00000439986 HDGFL2Q7Z4V5 671 aaPredicted RBP14.31□□□□□ -0.12
CCBE1-202ENST00000439986 PDS5BQ9NTI5 1447 aa14.31□□□□□ -0.12
CCBE1-202ENST00000439986 LTV1Q96GA3 475 aaPredicted RBP14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms