RNA–Protein interactions for RNA: ENST00000439510.2

CDC42EP4-202, Transcript of CDC42 effector protein 4, humanhuman

TSL 2 BASIC

Gene CDC42EP4, Length 2,879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-202ENST00000439510 CDC42BPAQ5VT25 1732 aa20.59■□□□□ 0.89
CDC42EP4-202ENST00000439510 LRPPRCP42704 1394 aaKnown RBP20.59■□□□□ 0.89
CDC42EP4-202ENST00000439510 CCDC136Q96JN2 1154 aa20.58■□□□□ 0.88
CDC42EP4-202ENST00000439510 KTN1Q86UP2 1357 aaKnown RBP20.57■□□□□ 0.88
CDC42EP4-202ENST00000439510 KIF15Q9NS87 1388 aa20.57■□□□□ 0.88
CDC42EP4-202ENST00000439510 ZNF326Q5BKZ1 582 aaKnown RBP20.56■□□□□ 0.88
CDC42EP4-202ENST00000439510 ABCC10Q5T3U5 1492 aa20.55■□□□□ 0.88
CDC42EP4-202ENST00000439510 TTC37Q6PGP7 1564 aa20.55■□□□□ 0.88
CDC42EP4-202ENST00000439510 POLR3GLQ9BT43 218 aa20.54■□□□□ 0.88
CDC42EP4-202ENST00000439510 BRD4O60885 1362 aaPredicted RBP20.54■□□□□ 0.88
CDC42EP4-202ENST00000439510 TMC1Q8TDI8 760 aa20.54■□□□□ 0.88
CDC42EP4-202ENST00000439510 NPM1P06748 294 aaKnown RBP eCLIP20.53■□□□□ 0.88
CDC42EP4-202ENST00000439510 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.52■□□□□ 0.88
CDC42EP4-202ENST00000439510 CARD11Q9BXL7 1154 aa20.51■□□□□ 0.87
CDC42EP4-202ENST00000439510 C9orf84Q5VXU9 1444 aa20.5■□□□□ 0.87
CDC42EP4-202ENST00000439510 MYBBP1AQ9BQG0 1328 aaKnown RBP20.5■□□□□ 0.87
CDC42EP4-202ENST00000439510 PAK3O75914 559 aaPredicted RBP20.5■□□□□ 0.87
CDC42EP4-202ENST00000439510 CNGB1Q14028 1251 aaPredicted RBP20.5■□□□□ 0.87
CDC42EP4-202ENST00000439510 NUP155O75694 1391 aa20.5■□□□□ 0.87
CDC42EP4-202ENST00000439510 ASXL2Q76L83 1435 aa20.49■□□□□ 0.87
CDC42EP4-202ENST00000439510 RALBP1Q15311 655 aa20.49■□□□□ 0.87
CDC42EP4-202ENST00000439510 DEKP35659 375 aaKnown RBP20.48■□□□□ 0.87
CDC42EP4-202ENST00000439510 CDC42BPBQ9Y5S2 1711 aa20.48■□□□□ 0.87
CDC42EP4-202ENST00000439510 IPO9Q96P70 1041 aaKnown RBP20.48■□□□□ 0.87
CDC42EP4-202ENST00000439510 WDR7Q9Y4E6 1490 aa20.47■□□□□ 0.87
CDC42EP4-202ENST00000439510 ANP32AP39687 249 aaKnown RBP20.47■□□□□ 0.87
CDC42EP4-202ENST00000439510 ST20-MTHFSA0A0A6YYL1 179 aa20.45■□□□□ 0.86
CDC42EP4-202ENST00000439510 ARHGEF5Q12774 1597 aa20.45■□□□□ 0.86
CDC42EP4-202ENST00000439510 MYO5CQ9NQX4 1742 aa20.44■□□□□ 0.86
CDC42EP4-202ENST00000439510 ARHGAP5Q13017 1502 aa20.44■□□□□ 0.86
CDC42EP4-202ENST00000439510 TRPM1Q7Z4N2 1603 aa20.44■□□□□ 0.86
CDC42EP4-202ENST00000439510 PREX2Q70Z35 1606 aa20.43■□□□□ 0.86
CDC42EP4-202ENST00000439510 HNRNPMP52272 730 aaKnown RBP eCLIP20.43■□□□□ 0.86
CDC42EP4-202ENST00000439510 RRP1P56182 461 aaKnown RBP20.42■□□□□ 0.86
CDC42EP4-202ENST00000439510 PARD3Q8TEW0 1356 aa20.41■□□□□ 0.86
CDC42EP4-202ENST00000439510 SAMD9LQ8IVG5 1584 aa20.39■□□□□ 0.85
CDC42EP4-202ENST00000439510 SENP3-EIF4A1A0A087X0R7 540 aa20.38■□□□□ 0.85
CDC42EP4-202ENST00000439510 DCAF11Q8TEB1 546 aa20.38■□□□□ 0.85
CDC42EP4-202ENST00000439510 PDE3BQ13370 1112 aa20.37■□□□□ 0.85
CDC42EP4-202ENST00000439510 NLRP13Q86W25 1043 aa20.37■□□□□ 0.85
CDC42EP4-202ENST00000439510 LAMC1P11047 1609 aa20.37■□□□□ 0.85
CDC42EP4-202ENST00000439510 FAM135AQ9P2D6 1515 aa20.37■□□□□ 0.85
CDC42EP4-202ENST00000439510 NBR1Q14596 966 aa20.37■□□□□ 0.85
CDC42EP4-202ENST00000439510 KDM2AQ9Y2K7 1162 aa20.36■□□□□ 0.85
CDC42EP4-202ENST00000439510 PRAG1Q86YV5 1406 aa20.36■□□□□ 0.85
CDC42EP4-202ENST00000439510 TSPY4P0CV99 314 aa20.36■□□□□ 0.85
CDC42EP4-202ENST00000439510 TSPY10P0CW01 314 aa20.36■□□□□ 0.85
CDC42EP4-202ENST00000439510 ZBTB47Q9UFB7 747 aaPredicted RBP20.36■□□□□ 0.85
CDC42EP4-202ENST00000439510 RCAN3Q9UKA8 241 aa20.36■□□□□ 0.85
CDC42EP4-202ENST00000439510 ZMYM4Q5VZL5 1548 aa20.36■□□□□ 0.85
CDC42EP4-202ENST00000439510 INSRP06213 1382 aa20.35■□□□□ 0.85
CDC42EP4-202ENST00000439510 TCERG1O14776 1098 aaKnown RBP20.34■□□□□ 0.85
CDC42EP4-202ENST00000439510 EXOC6Q8TAG9 804 aa20.34■□□□□ 0.85
CDC42EP4-202ENST00000439510 SYCP2Q9BX26 1530 aa20.34■□□□□ 0.85
CDC42EP4-202ENST00000439510 PLCH2O75038 1416 aa20.33■□□□□ 0.85
CDC42EP4-202ENST00000439510 GPRASP1Q5JY77 1395 aa20.33■□□□□ 0.84
CDC42EP4-202ENST00000439510 ABCA9Q8IUA7 1624 aa20.31■□□□□ 0.84
CDC42EP4-202ENST00000439510 PER1O15534 1290 aaPredicted RBP20.31■□□□□ 0.84
CDC42EP4-202ENST00000439510 CCDC141Q6ZP82 1450 aa20.31■□□□□ 0.84
CDC42EP4-202ENST00000439510 COL17A1Q9UMD9 1497 aaPredicted RBP20.31■□□□□ 0.84
CDC42EP4-202ENST00000439510 PRDM15P57071 1507 aaPredicted RBP20.3■□□□□ 0.84
CDC42EP4-202ENST00000439510 UNC13BO14795 1591 aa20.3■□□□□ 0.84
CDC42EP4-202ENST00000439510 WASHC2CQ9Y4E1 1318 aa20.3■□□□□ 0.84
CDC42EP4-202ENST00000439510 EFCAB2Q5VUJ9 269 aa20.3■□□□□ 0.84
CDC42EP4-202ENST00000439510 BLMP54132 1417 aaPredicted RBP20.29■□□□□ 0.84
CDC42EP4-202ENST00000439510 MS4A1P11836 297 aa20.28■□□□□ 0.84
CDC42EP4-202ENST00000439510 CCDC144AA2RUR9 1427 aa20.28■□□□□ 0.84
CDC42EP4-202ENST00000439510 FANCAO15360 1455 aa20.26■□□□□ 0.83
CDC42EP4-202ENST00000439510 MAST1Q9Y2H9 1570 aa20.26■□□□□ 0.83
CDC42EP4-202ENST00000439510 EIF2AK4Q9P2K8 1649 aaKnown RBP20.26■□□□□ 0.83
CDC42EP4-202ENST00000439510 A2MP01023 1474 aa20.26■□□□□ 0.83
CDC42EP4-202ENST00000439510 RTL5Q5HYW3 569 aaPredicted RBP20.25■□□□□ 0.83
CDC42EP4-202ENST00000439510 PLA2R1Q13018 1463 aa20.25■□□□□ 0.83
CDC42EP4-202ENST00000439510 PLEKHH2Q8IVE3 1493 aa20.25■□□□□ 0.83
CDC42EP4-202ENST00000439510 PDE4AP27815 886 aa20.24■□□□□ 0.83
CDC42EP4-202ENST00000439510 BACH2Q9BYV9 841 aa20.24■□□□□ 0.83
CDC42EP4-202ENST00000439510 CD109Q6YHK3 1445 aa20.24■□□□□ 0.83
CDC42EP4-202ENST00000439510 RSPH4AQ5TD94 716 aa20.23■□□□□ 0.83
CDC42EP4-202ENST00000439510 IQGAP3Q86VI3 1631 aa20.23■□□□□ 0.83
CDC42EP4-202ENST00000439510 FAM69CQ0P6D2 419 aa20.22■□□□□ 0.83
CDC42EP4-202ENST00000439510 AFAP1Q8N556 730 aa20.22■□□□□ 0.83
CDC42EP4-202ENST00000439510 NBPF1Q3BBV0 1214 aa20.21■□□□□ 0.83
CDC42EP4-202ENST00000439510 TESK2Q96S53 571 aa20.21■□□□□ 0.83
CDC42EP4-202ENST00000439510 TRAPPC8Q9Y2L5 1435 aa20.21■□□□□ 0.83
CDC42EP4-202ENST00000439510 DISP3Q9P2K9 1392 aa20.21■□□□□ 0.83
CDC42EP4-202ENST00000439510 ABCC1P33527 1531 aa20.21■□□□□ 0.83
CDC42EP4-202ENST00000439510 CDCA7LQ96GN5 454 aa20.21■□□□□ 0.83
CDC42EP4-202ENST00000439510 TSPOAP1O95153 1857 aa20.21■□□□□ 0.83
CDC42EP4-202ENST00000439510 SALL2Q9Y467 1007 aaPredicted RBP20.2■□□□□ 0.83
CDC42EP4-202ENST00000439510 RNF17Q9BXT8 1623 aaKnown RBP20.19■□□□□ 0.82
CDC42EP4-202ENST00000439510 PLXNC1O60486 1568 aa20.19■□□□□ 0.82
CDC42EP4-202ENST00000439510 ERBINQ96RT1 1412 aa20.19■□□□□ 0.82
CDC42EP4-202ENST00000439510 ATP10AO60312 1499 aa20.18■□□□□ 0.82
CDC42EP4-202ENST00000439510 ADGRL1O94910 1474 aa20.18■□□□□ 0.82
CDC42EP4-202ENST00000439510 SCAPERQ9BY12 1400 aa20.16■□□□□ 0.82
CDC42EP4-202ENST00000439510 NPM2Q86SE8 214 aaKnown RBP20.16■□□□□ 0.82
CDC42EP4-202ENST00000439510 ARAP3Q8WWN8 1544 aa20.16■□□□□ 0.82
CDC42EP4-202ENST00000439510 DIP2BQ9P265 1576 aa20.15■□□□□ 0.82
CDC42EP4-202ENST00000439510 CC2D1BQ5T0F9 858 aaKnown RBP20.14■□□□□ 0.82
CDC42EP4-202ENST00000439510 USP35Q9P2H5 1018 aa20.14■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 1656.7 ms