RNA–Protein interactions for RNA: ENST00000437564.5

MCF2-205, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-205ENST00000437564 TCERG1O14776 1098 aaKnown RBP8.39□□□□□ -1.07
MCF2-205ENST00000437564 NBPF11Q86T75 865 aa8.39□□□□□ -1.07
MCF2-205ENST00000437564 HS6ST3Q8IZP7 471 aa8.39□□□□□ -1.07
MCF2-205ENST00000437564 TTC36A6NLP5 189 aa8.39□□□□□ -1.07
MCF2-205ENST00000437564 NBPF1Q3BBV0 1214 aa8.39□□□□□ -1.07
MCF2-205ENST00000437564 EGFL6Q8IUX8 553 aa8.38□□□□□ -1.07
MCF2-205ENST00000437564 HSP90AB3PQ58FF7 597 aa8.37□□□□□ -1.07
MCF2-205ENST00000437564 GABBR2O75899 941 aa8.36□□□□□ -1.07
MCF2-205ENST00000437564 DCAF11Q8TEB1 546 aa8.36□□□□□ -1.07
MCF2-205ENST00000437564 SSUH2Q9Y2M2 353 aa8.35□□□□□ -1.07
MCF2-205ENST00000437564 C19orf67A6NJJ6 358 aa8.35□□□□□ -1.07
MCF2-205ENST00000437564 CWC22Q9HCG8 908 aaKnown RBP8.35□□□□□ -1.07
MCF2-205ENST00000437564 SOX12O15370 315 aa8.34□□□□□ -1.07
MCF2-205ENST00000437564 ZNF526Q8TF50 670 aaPredicted RBP8.34□□□□□ -1.07
MCF2-205ENST00000437564 EEA1Q15075 1411 aa8.33□□□□□ -1.08
MCF2-205ENST00000437564 ZSCAN20P17040 1043 aaPredicted RBP8.33□□□□□ -1.08
MCF2-205ENST00000437564 NKX1-1Q15270 411 aaPredicted RBP8.33□□□□□ -1.08
MCF2-205ENST00000437564 PABPN1Q86U42 306 aaKnown RBP eCLIP8.33□□□□□ -1.08
MCF2-205ENST00000437564 RNF25Q96BH1 459 aaPredicted RBP8.33□□□□□ -1.08
MCF2-205ENST00000437564 TSPYL1Q9H0U9 437 aa8.33□□□□□ -1.08
MCF2-205ENST00000437564 SH3BP1Q9Y3L3 701 aa8.33□□□□□ -1.08
MCF2-205ENST00000437564 CASC1Q6TDU7 716 aa8.32□□□□□ -1.08
MCF2-205ENST00000437564 NBPF9Q3BBW0 867 aa8.31□□□□□ -1.08
MCF2-205ENST00000437564 PLEKHD1A6NEE1 506 aa8.31□□□□□ -1.08
MCF2-205ENST00000437564 SPDYE2BA6NHP3 402 aa8.31□□□□□ -1.08
MCF2-205ENST00000437564 SPDYE6P0CI01 402 aa8.31□□□□□ -1.08
MCF2-205ENST00000437564 NFKBIBQ15653 356 aa8.31□□□□□ -1.08
MCF2-205ENST00000437564 SPDYE2Q495Y8 402 aa8.31□□□□□ -1.08
MCF2-205ENST00000437564 OSCARQ8IYS5 282 aa8.31□□□□□ -1.08
MCF2-205ENST00000437564 RAI14Q9P0K7 980 aa8.3□□□□□ -1.08
MCF2-205ENST00000437564 GTPBP6O43824 516 aaPredicted RBP8.3□□□□□ -1.08
MCF2-205ENST00000437564 ZBTB7CA1YPR0 619 aa8.29□□□□□ -1.08
MCF2-205ENST00000437564 BSDC1Q9NW68 430 aaPredicted RBP8.28□□□□□ -1.08
MCF2-205ENST00000437564 CCDC27Q2M243 656 aa8.28□□□□□ -1.08
MCF2-205ENST00000437564 CCDC94Q9BW85 323 aaPredicted RBP8.28□□□□□ -1.08
MCF2-205ENST00000437564 SSR1P43307 286 aaKnown RBP8.27□□□□□ -1.09
MCF2-205ENST00000437564 SATB1Q01826 763 aa8.27□□□□□ -1.09
MCF2-205ENST00000437564 HSP90AB4PQ58FF6 505 aa8.27□□□□□ -1.09
MCF2-205ENST00000437564 OTUD6BQ8N6M0 293 aa8.27□□□□□ -1.09
MCF2-205ENST00000437564 EFCC1Q9HA90 598 aa8.27□□□□□ -1.09
MCF2-205ENST00000437564 RBM28Q9NW13 759 aaKnown RBP8.27□□□□□ -1.09
MCF2-205ENST00000437564 E9PSI1 815 aa8.26□□□□□ -1.09
MCF2-205ENST00000437564 PRKAR2AP13861 404 aaKnown RBP8.26□□□□□ -1.09
MCF2-205ENST00000437564 LMOD3Q0VAK6 560 aa8.26□□□□□ -1.09
MCF2-205ENST00000437564 TERF2IPQ9NYB0 399 aa8.26□□□□□ -1.09
MCF2-205ENST00000437564 ESPNB1AK53 854 aa8.26□□□□□ -1.09
MCF2-205ENST00000437564 CCER2I3L3R5 266 aa8.26□□□□□ -1.09
MCF2-205ENST00000437564 MAP2K1Q02750 393 aaPredicted RBP8.26□□□□□ -1.09
MCF2-205ENST00000437564 NGEFQ8N5V2 710 aa8.26□□□□□ -1.09
MCF2-205ENST00000437564 BANK1Q8NDB2 785 aa8.26□□□□□ -1.09
MCF2-205ENST00000437564 NBPF10Q6P3W6 841 aaKnown RBP8.25□□□□□ -1.09
MCF2-205ENST00000437564 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.25□□□□□ -1.09
MCF2-205ENST00000437564 ZCCHC6Q5VYS8 1495 aaKnown RBP8.25□□□□□ -1.09
MCF2-205ENST00000437564 IRX5P78411 483 aaPredicted RBP8.24□□□□□ -1.09
MCF2-205ENST00000437564 SEMA3FQ13275 785 aa8.24□□□□□ -1.09
MCF2-205ENST00000437564 ZKSCAN8Q15776 578 aaPredicted RBP8.23□□□□□ -1.09
MCF2-205ENST00000437564 NBPF6Q5VWK0 638 aa8.23□□□□□ -1.09
MCF2-205ENST00000437564 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.23□□□□□ -1.09
MCF2-205ENST00000437564 KIAA1211Q6ZU35 1233 aa8.23□□□□□ -1.09
MCF2-205ENST00000437564 NBPF5PQ86XG9 351 aaPredicted RBP8.23□□□□□ -1.09
MCF2-205ENST00000437564 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.23□□□□□ -1.09
MCF2-205ENST00000437564 NBPF4Q96M43 638 aa8.23□□□□□ -1.09
MCF2-205ENST00000437564 GOLIM4O00461 696 aa8.22□□□□□ -1.09
MCF2-205ENST00000437564 TMTC2Q8N394 836 aa8.22□□□□□ -1.09
MCF2-205ENST00000437564 DYNC1I1O14576 645 aa8.22□□□□□ -1.09
MCF2-205ENST00000437564 IRF6O14896 467 aa8.22□□□□□ -1.09
MCF2-205ENST00000437564 CEP83Q9Y592 693 aa8.22□□□□□ -1.09
MCF2-205ENST00000437564 NRDCO43847 1150 aa8.21□□□□□ -1.09
MCF2-205ENST00000437564 ZNF500O60304 480 aaPredicted RBP8.21□□□□□ -1.09
MCF2-205ENST00000437564 TSHZ1Q6ZSZ6 1077 aa8.21□□□□□ -1.09
MCF2-205ENST00000437564 RIPK4P57078 832 aa8.21□□□□□ -1.1
MCF2-205ENST00000437564 AEBP1Q8IUX7 1158 aa8.21□□□□□ -1.1
MCF2-205ENST00000437564 CCDC66A2RUB6 948 aa8.2□□□□□ -1.1
MCF2-205ENST00000437564 RIOK3O14730 519 aaKnown RBP8.2□□□□□ -1.1
MCF2-205ENST00000437564 OFD1O75665 1012 aa8.2□□□□□ -1.1
MCF2-205ENST00000437564 MYCBPQ99417 103 aaPredicted RBP8.2□□□□□ -1.1
MCF2-205ENST00000437564 ISY1Q9ULR0 285 aaKnown RBP8.2□□□□□ -1.1
MCF2-205ENST00000437564 SETDB1Q15047 1291 aa8.19□□□□□ -1.1
MCF2-205ENST00000437564 CTR9Q6PD62 1173 aa8.19□□□□□ -1.1
MCF2-205ENST00000437564 EXOC8Q8IYI6 725 aa8.19□□□□□ -1.1
MCF2-205ENST00000437564 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.19□□□□□ -1.1
MCF2-205ENST00000437564 CALRP27797 417 aaKnown RBP8.19□□□□□ -1.1
MCF2-205ENST00000437564 ARID4AP29374 1257 aaPredicted RBP8.19□□□□□ -1.1
MCF2-205ENST00000437564 FAM50AQ14320 339 aaKnown RBP8.19□□□□□ -1.1
MCF2-205ENST00000437564 FAM177A1Q8N128 213 aaPredicted RBP8.19□□□□□ -1.1
MCF2-205ENST00000437564 FAM13BQ9NYF5 915 aa8.19□□□□□ -1.1
MCF2-205ENST00000437564 CGNQ9P2M7 1197 aaKnown RBP8.19□□□□□ -1.1
MCF2-205ENST00000437564 CCDC96Q2M329 555 aa8.18□□□□□ -1.1
MCF2-205ENST00000437564 RINLQ6ZS11 566 aa8.18□□□□□ -1.1
MCF2-205ENST00000437564 CCDC172P0C7W6 258 aa8.17□□□□□ -1.1
MCF2-205ENST00000437564 CLCN6P51797 869 aa8.17□□□□□ -1.1
MCF2-205ENST00000437564 NUBP1P53384 320 aa8.17□□□□□ -1.1
MCF2-205ENST00000437564 NCAPD3P42695 1498 aa8.17□□□□□ -1.1
MCF2-205ENST00000437564 P3H3Q8IVL6 736 aa8.17□□□□□ -1.1
MCF2-205ENST00000437564 MKL1Q969V6 931 aa8.17□□□□□ -1.1
MCF2-205ENST00000437564 ZBED9Q6R2W3 1325 aa8.16□□□□□ -1.1
MCF2-205ENST00000437564 STK25O00506 426 aa8.16□□□□□ -1.1
MCF2-205ENST00000437564 KIF1CO43896 1103 aaKnown RBP8.16□□□□□ -1.1
MCF2-205ENST00000437564 MS4A1P11836 297 aa8.16□□□□□ -1.1
MCF2-205ENST00000437564 BRPF1P55201 1214 aaPredicted RBP8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms