RNA–Protein interactions for RNA: ENST00000434418.2

LINC01090-202, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 5 BASIC

Gene LINC01090, Length 560 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-202ENST00000434418 KHSRPQ92945 711 aaKnown RBP eCLIP17.69■□□□□ 0.427e-7■■■□□ 16.8
LINC01090-202ENST00000434418 ARIH1Q9Y4X5 557 aaPredicted RBP17.69■□□□□ 0.42
LINC01090-202ENST00000434418 SNPHO15079 494 aa17.68■□□□□ 0.42
LINC01090-202ENST00000434418 GRIN2BQ13224 1484 aa17.68■□□□□ 0.42
LINC01090-202ENST00000434418 PBRM1Q86U86 1689 aa17.67■□□□□ 0.42
LINC01090-202ENST00000434418 ZNF710Q8N1W2 664 aa17.67■□□□□ 0.42
LINC01090-202ENST00000434418 MAGI1Q96QZ7 1491 aaPredicted RBP17.67■□□□□ 0.42
LINC01090-202ENST00000434418 MAP3K9P80192 1104 aa17.66■□□□□ 0.42
LINC01090-202ENST00000434418 ARSIQ5FYB1 569 aa17.65■□□□□ 0.42
LINC01090-202ENST00000434418 RIMBP2O15034 1052 aa17.64■□□□□ 0.41
LINC01090-202ENST00000434418 CYB5RLQ6IPT4 315 aa17.64■□□□□ 0.41
LINC01090-202ENST00000434418 GAPVD1Q14C86 1478 aa17.63■□□□□ 0.41
LINC01090-202ENST00000434418 ARAP1Q96P48 1450 aa17.63■□□□□ 0.41
LINC01090-202ENST00000434418 ABCA5Q8WWZ7 1642 aa17.63■□□□□ 0.41
LINC01090-202ENST00000434418 GPR153Q6NV75 609 aa17.63■□□□□ 0.41
LINC01090-202ENST00000434418 CHMP7Q8WUX9 453 aaPredicted RBP17.63■□□□□ 0.41
LINC01090-202ENST00000434418 CLASP1Q7Z460 1538 aa17.62■□□□□ 0.41
LINC01090-202ENST00000434418 ABCA10Q8WWZ4 1543 aa17.62■□□□□ 0.41
LINC01090-202ENST00000434418 SYNJ2O15056 1496 aa17.62■□□□□ 0.41
LINC01090-202ENST00000434418 SYNJ1O43426 1573 aa17.62■□□□□ 0.41
LINC01090-202ENST00000434418 PDIA6Q15084 440 aa17.6■□□□□ 0.41
LINC01090-202ENST00000434418 TBC1D12O60347 775 aa17.59■□□□□ 0.41
LINC01090-202ENST00000434418 NUDT7P0C024 238 aa17.59■□□□□ 0.41
LINC01090-202ENST00000434418 ZSWIM6Q9HCJ5 1215 aa17.59■□□□□ 0.41
LINC01090-202ENST00000434418 BIVM-ERCC5R4GMW8 1640 aa17.58■□□□□ 0.41
LINC01090-202ENST00000434418 EVI5O60447 810 aa17.58■□□□□ 0.4
LINC01090-202ENST00000434418 TOP2BQ02880 1626 aa17.58■□□□□ 0.4
LINC01090-202ENST00000434418 SEMA3EO15041 775 aa17.57■□□□□ 0.4
LINC01090-202ENST00000434418 ST18O60284 1047 aa17.57■□□□□ 0.4
LINC01090-202ENST00000434418 WRNQ14191 1432 aaPredicted RBP eCLIP17.56■□□□□ 0.4
LINC01090-202ENST00000434418 NBR1Q14596 966 aa17.56■□□□□ 0.4
LINC01090-202ENST00000434418 FAM163AQ96GL9 167 aaPredicted RBP17.56■□□□□ 0.4
LINC01090-202ENST00000434418 KDM4FA0A1W2PPD8 638 aa17.55■□□□□ 0.4
LINC01090-202ENST00000434418 HOXB1P14653 301 aaPredicted RBP17.53■□□□□ 0.4
LINC01090-202ENST00000434418 LCE2DQ5TA82 110 aaPredicted RBP17.53■□□□□ 0.4
LINC01090-202ENST00000434418 SPDYE16A6NNV3 312 aaPredicted RBP17.52■□□□□ 0.4
LINC01090-202ENST00000434418 ADAMTS12P58397 1594 aa17.49■□□□□ 0.39
LINC01090-202ENST00000434418 MLLT3P42568 568 aaPredicted RBP17.49■□□□□ 0.39
LINC01090-202ENST00000434418 BCANQ96GW7 911 aa17.49■□□□□ 0.39
LINC01090-202ENST00000434418 GRIN2AQ12879 1464 aa17.47■□□□□ 0.39
LINC01090-202ENST00000434418 ZNF316A6NFI3 1004 aaPredicted RBP17.46■□□□□ 0.39
LINC01090-202ENST00000434418 DDX12PQ92771 950 aa17.46■□□□□ 0.39
LINC01090-202ENST00000434418 MARVELD3Q96A59 401 aa17.46■□□□□ 0.39
LINC01090-202ENST00000434418 ANO8Q9HCE9 1232 aaPredicted RBP17.46■□□□□ 0.39
LINC01090-202ENST00000434418 TESPA1A2RU30 521 aaPredicted RBP17.44■□□□□ 0.38
LINC01090-202ENST00000434418 LHX6Q9UPM6 363 aa17.44■□□□□ 0.38
LINC01090-202ENST00000434418 CEP170Q5SW79 1584 aa17.44■□□□□ 0.38
LINC01090-202ENST00000434418 GRXCR2A6NFK2 248 aa17.41■□□□□ 0.38
LINC01090-202ENST00000434418 FHAD1B1AJZ9 1412 aa17.4■□□□□ 0.38
LINC01090-202ENST00000434418 ERICH3Q5RHP9 1530 aa17.4■□□□□ 0.38
LINC01090-202ENST00000434418 ERCC6L2Q5T890 1561 aa17.4■□□□□ 0.38
LINC01090-202ENST00000434418 NUP160Q12769 1436 aa17.38■□□□□ 0.37
LINC01090-202ENST00000434418 PTGER2P43116 358 aa17.38■□□□□ 0.37
LINC01090-202ENST00000434418 EMP3P54852 163 aa17.37■□□□□ 0.37
LINC01090-202ENST00000434418 ZNF454Q8N9F8 522 aa17.34■□□□□ 0.37
LINC01090-202ENST00000434418 PCDHGA10Q9Y5H3 936 aa17.34■□□□□ 0.37
LINC01090-202ENST00000434418 PRIM1P49642 420 aaKnown RBP17.33■□□□□ 0.36
LINC01090-202ENST00000434418 FOSBP53539 338 aa17.33■□□□□ 0.36
LINC01090-202ENST00000434418 SHROOM2Q13796 1616 aa17.32■□□□□ 0.36
LINC01090-202ENST00000434418 JPH4Q96JJ6 628 aa17.32■□□□□ 0.36
LINC01090-202ENST00000434418 ERBB3P21860 1342 aa17.3■□□□□ 0.36
LINC01090-202ENST00000434418 FAM205CA6NFA0 338 aa17.3■□□□□ 0.36
LINC01090-202ENST00000434418 PHF14O94880 888 aa17.3■□□□□ 0.36
LINC01090-202ENST00000434418 VARS2Q5ST30 1063 aaKnown RBP17.3■□□□□ 0.36
LINC01090-202ENST00000434418 OSBPP22059 807 aa17.29■□□□□ 0.36
LINC01090-202ENST00000434418 POTEB3A0JP26 581 aa17.26■□□□□ 0.35
LINC01090-202ENST00000434418 POTEBQ6S5H4 581 aa17.26■□□□□ 0.35
LINC01090-202ENST00000434418 RUSC2Q8N2Y8 1516 aa17.26■□□□□ 0.35
LINC01090-202ENST00000434418 RBM26Q5T8P6 1007 aaKnown RBP17.25■□□□□ 0.35
LINC01090-202ENST00000434418 TYW1BQ6NUM6 668 aa17.24■□□□□ 0.35
LINC01090-202ENST00000434418 RBM33Q96EV2 1170 aaKnown RBP17.24■□□□□ 0.35
LINC01090-202ENST00000434418 PRG4Q92954 1404 aaPredicted RBP17.23■□□□□ 0.35
LINC01090-202ENST00000434418 SMYD5Q6GMV2 418 aa17.23■□□□□ 0.35
LINC01090-202ENST00000434418 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.23■□□□□ 0.35
LINC01090-202ENST00000434418 HS3ST6Q96QI5 342 aa17.23■□□□□ 0.35
LINC01090-202ENST00000434418 EPAS1Q99814 870 aa17.23■□□□□ 0.35
LINC01090-202ENST00000434418 ADAM33Q9BZ11 813 aa17.23■□□□□ 0.35
LINC01090-202ENST00000434418 PPP4R3BQ5MIZ7 849 aa17.22■□□□□ 0.35
LINC01090-202ENST00000434418 ZDHHC16Q969W1 377 aa17.22■□□□□ 0.35
LINC01090-202ENST00000434418 LMOD2Q6P5Q4 547 aa17.21■□□□□ 0.35
LINC01090-202ENST00000434418 KIF27Q86VH2 1401 aa17.21■□□□□ 0.34
LINC01090-202ENST00000434418 PSDA5PKW4 1024 aaPredicted RBP17.2■□□□□ 0.34
LINC01090-202ENST00000434418 EN1Q05925 392 aaPredicted RBP17.2■□□□□ 0.34
LINC01090-202ENST00000434418 CUL7Q14999 1698 aa17.19■□□□□ 0.34
LINC01090-202ENST00000434418 IGF1RP08069 1367 aa17.18■□□□□ 0.34
LINC01090-202ENST00000434418 MAP3K7O43318 606 aa17.18■□□□□ 0.34
LINC01090-202ENST00000434418 TULP1O00294 542 aaPredicted RBP17.17■□□□□ 0.34
LINC01090-202ENST00000434418 TSR1Q2NL82 804 aaKnown RBP17.17■□□□□ 0.34
LINC01090-202ENST00000434418 FBXW7Q969H0 707 aa17.17■□□□□ 0.34
LINC01090-202ENST00000434418 CDHR5Q9HBB8 845 aa17.16■□□□□ 0.34
LINC01090-202ENST00000434418 POTEEQ6S8J3 1075 aa17.13■□□□□ 0.33
LINC01090-202ENST00000434418 BCL2L12Q9HB09 334 aa17.12■□□□□ 0.33
LINC01090-202ENST00000434418 POTEGQ6S5H5 508 aa17.11■□□□□ 0.33
LINC01090-202ENST00000434418 KIAA0586Q9BVV6 1533 aa17.11■□□□□ 0.33
LINC01090-202ENST00000434418 NUTM2FA1L443 756 aa17.1■□□□□ 0.33
LINC01090-202ENST00000434418 C6orf132Q5T0Z8 1188 aa17.1■□□□□ 0.33
LINC01090-202ENST00000434418 POTEMA6NI47 508 aa17.09■□□□□ 0.33
LINC01090-202ENST00000434418 AXIN2Q9Y2T1 843 aa17.09■□□□□ 0.33
LINC01090-202ENST00000434418 ZNF687Q8N1G0 1237 aa17.08■□□□□ 0.32
LINC01090-202ENST00000434418 KCNK17Q96T54 332 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms