RNA–Protein interactions for RNA: ENST00000432645.6

HDAC9-212, Transcript of histone deacetylase 9, humanhuman

TSL 1 (best) BASIC

Gene HDAC9, Length 3,099 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-212ENST00000432645 FANCAO15360 1455 aa11.61□□□□□ -0.55
HDAC9-212ENST00000432645 POLR3GLQ9BT43 218 aa11.59□□□□□ -0.55
HDAC9-212ENST00000432645 DUOX2Q9NRD8 1548 aa11.59□□□□□ -0.55
HDAC9-212ENST00000432645 PLXNC1O60486 1568 aa11.59□□□□□ -0.55
HDAC9-212ENST00000432645 SCAPERQ9BY12 1400 aa11.58□□□□□ -0.56
HDAC9-212ENST00000432645 CCDC144AA2RUR9 1427 aa11.58□□□□□ -0.56
HDAC9-212ENST00000432645 ADGRL1O94910 1474 aa11.57□□□□□ -0.56
HDAC9-212ENST00000432645 ERBINQ96RT1 1412 aa11.57□□□□□ -0.56
HDAC9-212ENST00000432645 CCDC7Q96M83 1385 aa11.57□□□□□ -0.56
HDAC9-212ENST00000432645 CARD11Q9BXL7 1154 aa11.56□□□□□ -0.56
HDAC9-212ENST00000432645 SPATA31E1Q6ZUB1 1445 aa11.56□□□□□ -0.56
HDAC9-212ENST00000432645 USP47Q96K76 1375 aa11.56□□□□□ -0.56
HDAC9-212ENST00000432645 PLA2R1Q13018 1463 aa11.56□□□□□ -0.56
HDAC9-212ENST00000432645 KIF7Q2M1P5 1343 aa11.56□□□□□ -0.56
HDAC9-212ENST00000432645 CNGB1Q14028 1251 aaPredicted RBP11.56□□□□□ -0.56
HDAC9-212ENST00000432645 ABCA9Q8IUA7 1624 aa11.56□□□□□ -0.56
HDAC9-212ENST00000432645 UNC13BO14795 1591 aa11.55□□□□□ -0.56
HDAC9-212ENST00000432645 KIF3BO15066 747 aa11.55□□□□□ -0.56
HDAC9-212ENST00000432645 CYB5RLQ6IPT4 315 aa11.55□□□□□ -0.56
HDAC9-212ENST00000432645 ARAP3Q8WWN8 1544 aa11.55□□□□□ -0.56
HDAC9-212ENST00000432645 CCER2I3L3R5 266 aa11.54□□□□□ -0.56
HDAC9-212ENST00000432645 ZFYVE16Q7Z3T8 1539 aa11.54□□□□□ -0.56
HDAC9-212ENST00000432645 RTEL1-TNFRSF6BF6WH68 1400 aa11.53□□□□□ -0.56
HDAC9-212ENST00000432645 ANO8Q9HCE9 1232 aaPredicted RBP11.53□□□□□ -0.56
HDAC9-212ENST00000432645 CD109Q6YHK3 1445 aa11.53□□□□□ -0.56
HDAC9-212ENST00000432645 PODXL2Q9NZ53 605 aa11.52□□□□□ -0.56
HDAC9-212ENST00000432645 IQGAP3Q86VI3 1631 aa11.52□□□□□ -0.57
HDAC9-212ENST00000432645 UHRF1BP1Q6BDS2 1440 aa11.52□□□□□ -0.57
HDAC9-212ENST00000432645 NCBP3Q53F19 620 aaKnown RBP11.52□□□□□ -0.57
HDAC9-212ENST00000432645 CNTLNQ9NXG0 1405 aa11.52□□□□□ -0.57
HDAC9-212ENST00000432645 ATP7AQ04656 1500 aa11.51□□□□□ -0.57
HDAC9-212ENST00000432645 ROCK2O75116 1388 aaKnown RBP11.51□□□□□ -0.57
HDAC9-212ENST00000432645 ST20-MTHFSA0A0A6YYL1 179 aa11.51□□□□□ -0.57
HDAC9-212ENST00000432645 NBPF1Q3BBV0 1214 aa11.51□□□□□ -0.57
HDAC9-212ENST00000432645 MAGI2Q86UL8 1455 aa11.5□□□□□ -0.57
HDAC9-212ENST00000432645 RALGAPBQ86X10 1494 aa11.5□□□□□ -0.57
HDAC9-212ENST00000432645 RAPGEF3O95398 923 aa11.49□□□□□ -0.57
HDAC9-212ENST00000432645 CCDC184Q52MB2 194 aa11.48□□□□□ -0.57
HDAC9-212ENST00000432645 DHX29Q7Z478 1369 aaKnown RBP11.48□□□□□ -0.57
HDAC9-212ENST00000432645 A2MP01023 1474 aa11.48□□□□□ -0.57
HDAC9-212ENST00000432645 KDM5CP41229 1560 aa11.48□□□□□ -0.57
HDAC9-212ENST00000432645 PRAG1Q86YV5 1406 aa11.47□□□□□ -0.57
HDAC9-212ENST00000432645 PRKRIP1Q9H875 184 aaPredicted RBP11.47□□□□□ -0.57
HDAC9-212ENST00000432645 INO80Q9ULG1 1556 aaPredicted RBP11.47□□□□□ -0.57
HDAC9-212ENST00000432645 KANK1Q14678 1352 aa11.47□□□□□ -0.57
HDAC9-212ENST00000432645 BCORL1Q5H9F3 1711 aa11.47□□□□□ -0.57
HDAC9-212ENST00000432645 ZNF518AQ6AHZ1 1483 aa11.46□□□□□ -0.57
HDAC9-212ENST00000432645 GGT6Q6P531 493 aa11.46□□□□□ -0.57
HDAC9-212ENST00000432645 SUPT16HQ9Y5B9 1047 aaKnown RBP11.45□□□□□ -0.58
HDAC9-212ENST00000432645 ATP10AO60312 1499 aa11.44□□□□□ -0.58
HDAC9-212ENST00000432645 E9PCH4 1651 aa11.44□□□□□ -0.58
HDAC9-212ENST00000432645 HNRNPUQ00839 825 aaKnown RBP eCLIP11.43□□□□□ -0.58
HDAC9-212ENST00000432645 KIDINS220Q9ULH0 1771 aa11.43□□□□□ -0.58
HDAC9-212ENST00000432645 POGZQ7Z3K3 1410 aa11.43□□□□□ -0.58
HDAC9-212ENST00000432645 FAM9BQ8IZU0 186 aa11.43□□□□□ -0.58
HDAC9-212ENST00000432645 MRS2Q9HD23 443 aa11.42□□□□□ -0.58
HDAC9-212ENST00000432645 PKNOX2Q96KN3 472 aa11.41□□□□□ -0.58
HDAC9-212ENST00000432645 DEPDC5O75140 1603 aa11.41□□□□□ -0.58
HDAC9-212ENST00000432645 TRPM1Q7Z4N2 1603 aa11.41□□□□□ -0.58
HDAC9-212ENST00000432645 FAM69CQ0P6D2 419 aa11.4□□□□□ -0.58
HDAC9-212ENST00000432645 PTPRTO14522 1441 aa11.4□□□□□ -0.59
HDAC9-212ENST00000432645 ARID4BQ4LE39 1312 aaPredicted RBP11.4□□□□□ -0.59
HDAC9-212ENST00000432645 TRPM2O94759 1503 aa11.39□□□□□ -0.59
HDAC9-212ENST00000432645 CHGAP10645 457 aaKnown RBP11.39□□□□□ -0.59
HDAC9-212ENST00000432645 BCANQ96GW7 911 aa11.39□□□□□ -0.59
HDAC9-212ENST00000432645 UGGT1Q9NYU2 1555 aa11.39□□□□□ -0.59
HDAC9-212ENST00000432645 POLR1AO95602 1720 aaPredicted RBP11.39□□□□□ -0.59
HDAC9-212ENST00000432645 MROH1Q8NDA8 1641 aa11.39□□□□□ -0.59
HDAC9-212ENST00000432645 PRDM15P57071 1507 aaPredicted RBP11.38□□□□□ -0.59
HDAC9-212ENST00000432645 TET3O43151 1660 aa11.38□□□□□ -0.59
HDAC9-212ENST00000432645 CLTCL1P53675 1640 aa11.38□□□□□ -0.59
HDAC9-212ENST00000432645 WASHC2CQ9Y4E1 1318 aa11.38□□□□□ -0.59
HDAC9-212ENST00000432645 VWDEQ8N2E2 1590 aa11.38□□□□□ -0.59
HDAC9-212ENST00000432645 MLH3Q9UHC1 1453 aa11.38□□□□□ -0.59
HDAC9-212ENST00000432645 CFAP74Q9C0B2 1584 aa11.38□□□□□ -0.59
HDAC9-212ENST00000432645 RIMBP3CA6NJZ7 1639 aa11.37□□□□□ -0.59
HDAC9-212ENST00000432645 RIMBP3BA6NNM3 1639 aa11.37□□□□□ -0.59
HDAC9-212ENST00000432645 RIMBP3Q9UFD9 1639 aa11.37□□□□□ -0.59
HDAC9-212ENST00000432645 SPHKAPQ2M3C7 1700 aa11.37□□□□□ -0.59
HDAC9-212ENST00000432645 GPRASP1Q5JY77 1395 aa11.37□□□□□ -0.59
HDAC9-212ENST00000432645 EIF2AK4Q9P2K8 1649 aaKnown RBP11.37□□□□□ -0.59
HDAC9-212ENST00000432645 TESK2Q96S53 571 aa11.37□□□□□ -0.59
HDAC9-212ENST00000432645 HECW2Q9P2P5 1572 aa11.36□□□□□ -0.59
HDAC9-212ENST00000432645 NEO1Q92859 1461 aa11.36□□□□□ -0.59
HDAC9-212ENST00000432645 FRMPD1Q5SYB0 1578 aa11.36□□□□□ -0.59
HDAC9-212ENST00000432645 DISP3Q9P2K9 1392 aa11.35□□□□□ -0.59
HDAC9-212ENST00000432645 SENP3-EIF4A1A0A087X0R7 540 aa11.35□□□□□ -0.59
HDAC9-212ENST00000432645 PLPPR3Q6T4P5 718 aa11.34□□□□□ -0.59
HDAC9-212ENST00000432645 EFCAB6Q5THR3 1501 aa11.34□□□□□ -0.59
HDAC9-212ENST00000432645 ABCA6Q8N139 1617 aa11.34□□□□□ -0.59
HDAC9-212ENST00000432645 CFAP70Q5T0N1 1121 aa11.34□□□□□ -0.59
HDAC9-212ENST00000432645 ADGRF5Q8IZF2 1346 aa11.34□□□□□ -0.59
HDAC9-212ENST00000432645 PPRC1Q5VV67 1664 aaKnown RBP11.34□□□□□ -0.59
HDAC9-212ENST00000432645 YEATS2Q9ULM3 1422 aa11.33□□□□□ -0.6
HDAC9-212ENST00000432645 TSHZ2Q9NRE2 1034 aa11.33□□□□□ -0.6
HDAC9-212ENST00000432645 CEP152O94986 1710 aa11.33□□□□□ -0.6
HDAC9-212ENST00000432645 NPATQ14207 1427 aa11.33□□□□□ -0.6
HDAC9-212ENST00000432645 TMF1P82094 1093 aa11.33□□□□□ -0.6
HDAC9-212ENST00000432645 ARXQ96QS3 562 aa11.33□□□□□ -0.6
HDAC9-212ENST00000432645 FKBP8Q14318 412 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms