RNA–Protein interactions for RNA: ENST00000430249.6

CPS1-203, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best) BASIC

Gene CPS1, Length 5,698 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-203ENST00000430249 B4GALNT3Q6L9W6 998 aa8.78□□□□□ -1
CPS1-203ENST00000430249 NAP1L2Q9ULW6 460 aaPredicted RBP8.78□□□□□ -1
CPS1-203ENST00000430249 CENPQQ7L2Z9 268 aaPredicted RBP8.77□□□□□ -1
CPS1-203ENST00000430249 L3MBTL2Q969R5 705 aa8.77□□□□□ -1.01
CPS1-203ENST00000430249 SMC4Q9NTJ3 1288 aa8.77□□□□□ -1.01
CPS1-203ENST00000430249 CSB-PGBD3P0DP91 1061 aa8.77□□□□□ -1.01
CPS1-203ENST00000430249 TRHP20396 242 aaPredicted RBP8.76□□□□□ -1.01
CPS1-203ENST00000430249 DRC7Q8IY82 874 aa8.76□□□□□ -1.01
CPS1-203ENST00000430249 DDX11L8A8MPP1 907 aa8.76□□□□□ -1.01
CPS1-203ENST00000430249 ST18O60284 1047 aa8.76□□□□□ -1.01
CPS1-203ENST00000430249 STK26Q9P289 416 aa8.76□□□□□ -1.01
CPS1-203ENST00000430249 HNRNPMP52272 730 aaKnown RBP eCLIP8.76□□□□□ -1.01
CPS1-203ENST00000430249 EHBP1L1Q8N3D4 1523 aa8.76□□□□□ -1.01
CPS1-203ENST00000430249 FGD6Q6ZV73 1430 aa8.75□□□□□ -1.01
CPS1-203ENST00000430249 SKOR2Q2VWA4 1001 aaPredicted RBP8.75□□□□□ -1.01
CPS1-203ENST00000430249 ZBED9Q6R2W3 1325 aa8.75□□□□□ -1.01
CPS1-203ENST00000430249 HMGXB3Q12766 1538 aa8.75□□□□□ -1.01
CPS1-203ENST00000430249 MLECQ14165 292 aa8.75□□□□□ -1.01
CPS1-203ENST00000430249 GRIN2BQ13224 1484 aa8.75□□□□□ -1.01
CPS1-203ENST00000430249 RRBP1Q9P2E9 1410 aaKnown RBP8.75□□□□□ -1.01
CPS1-203ENST00000430249 PLCB2Q00722 1185 aa8.74□□□□□ -1.01
CPS1-203ENST00000430249 ANO8Q9HCE9 1232 aaPredicted RBP8.74□□□□□ -1.01
CPS1-203ENST00000430249 ATP6V1DQ9Y5K8 247 aa8.74□□□□□ -1.01
CPS1-203ENST00000430249 CNTLNQ9NXG0 1405 aa8.74□□□□□ -1.01
CPS1-203ENST00000430249 USP47Q96K76 1375 aa8.74□□□□□ -1.01
CPS1-203ENST00000430249 GORABQ5T7V8 394 aa8.74□□□□□ -1.01
CPS1-203ENST00000430249 PLEKHG5O94827 1062 aa8.73□□□□□ -1.01
CPS1-203ENST00000430249 NGDNQ8NEJ9 315 aaKnown RBP8.73□□□□□ -1.01
CPS1-203ENST00000430249 AMPHP49418 695 aa8.73□□□□□ -1.01
CPS1-203ENST00000430249 COG3Q96JB2 828 aa8.73□□□□□ -1.01
CPS1-203ENST00000430249 IPO9Q96P70 1041 aaKnown RBP8.73□□□□□ -1.01
CPS1-203ENST00000430249 PAK3O75914 559 aaPredicted RBP8.73□□□□□ -1.01
CPS1-203ENST00000430249 LRRC9Q6ZRR7 1453 aa8.73□□□□□ -1.01
CPS1-203ENST00000430249 TAF7LQ5H9L4 462 aa8.73□□□□□ -1.01
CPS1-203ENST00000430249 RBM19Q9Y4C8 960 aaKnown RBP8.73□□□□□ -1.01
CPS1-203ENST00000430249 IFT140Q96RY7 1462 aa8.72□□□□□ -1.01
CPS1-203ENST00000430249 IGF1RP08069 1367 aa8.72□□□□□ -1.01
CPS1-203ENST00000430249 HECW1Q76N89 1606 aa8.72□□□□□ -1.01
CPS1-203ENST00000430249 GOLGA6L3A6NEY3 463 aa8.72□□□□□ -1.01
CPS1-203ENST00000430249 KIF16BQ96L93 1317 aa8.72□□□□□ -1.01
CPS1-203ENST00000430249 ZKSCAN2Q63HK3 967 aa8.71□□□□□ -1.01
CPS1-203ENST00000430249 SENP3Q9H4L4 574 aaPredicted RBP8.71□□□□□ -1.01
CPS1-203ENST00000430249 SYNJ2O15056 1496 aa8.71□□□□□ -1.01
CPS1-203ENST00000430249 HFM1A2PYH4 1435 aa8.71□□□□□ -1.02
CPS1-203ENST00000430249 SAFB2Q14151 953 aaKnown RBP eCLIP8.71□□□□□ -1.02
CPS1-203ENST00000430249 RUFY2Q8WXA3 655 aa8.71□□□□□ -1.02
CPS1-203ENST00000430249 API5Q9BZZ5 524 aaKnown RBP8.71□□□□□ -1.02
CPS1-203ENST00000430249 MRC2Q9UBG0 1479 aa8.7□□□□□ -1.02
CPS1-203ENST00000430249 C1orf141Q5JVX7 400 aa8.7□□□□□ -1.02
CPS1-203ENST00000430249 HSP90B1P14625 803 aaKnown RBP8.7□□□□□ -1.02
CPS1-203ENST00000430249 DDX19BQ9UMR2 479 aa8.7□□□□□ -1.02
CPS1-203ENST00000430249 WASHC2AQ641Q2 1341 aa8.69□□□□□ -1.02
CPS1-203ENST00000430249 FAM161AQ3B820 660 aa8.69□□□□□ -1.02
CPS1-203ENST00000430249 FOXD1Q16676 465 aa8.69□□□□□ -1.02
CPS1-203ENST00000430249 HSP90AB4PQ58FF6 505 aa8.69□□□□□ -1.02
CPS1-203ENST00000430249 NINLQ9Y2I6 1382 aa8.69□□□□□ -1.02
CPS1-203ENST00000430249 CFTRP13569 1480 aa8.68□□□□□ -1.02
CPS1-203ENST00000430249 NCOA2Q15596 1464 aa8.68□□□□□ -1.02
CPS1-203ENST00000430249 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.68□□□□□ -1.02
CPS1-203ENST00000430249 TRIM6-TRIM34B2RNG4 842 aa8.68□□□□□ -1.02
CPS1-203ENST00000430249 PANK3Q9H999 370 aa8.68□□□□□ -1.02
CPS1-203ENST00000430249 BRD4O60885 1362 aaPredicted RBP8.67□□□□□ -1.02
CPS1-203ENST00000430249 OSCARQ8IYS5 282 aa8.67□□□□□ -1.02
CPS1-203ENST00000430249 TOP2BQ02880 1626 aa8.67□□□□□ -1.02
CPS1-203ENST00000430249 REC8O95072 547 aa8.67□□□□□ -1.02
CPS1-203ENST00000430249 DDX58O95786 925 aaKnown RBP8.67□□□□□ -1.02
CPS1-203ENST00000430249 TPM2P07951 284 aa8.67□□□□□ -1.02
CPS1-203ENST00000430249 DEKP35659 375 aaKnown RBP8.67□□□□□ -1.02
CPS1-203ENST00000430249 RRP1P56182 461 aaKnown RBP8.67□□□□□ -1.02
CPS1-203ENST00000430249 AMOTL1Q8IY63 956 aa8.67□□□□□ -1.02
CPS1-203ENST00000430249 NEXNQ0ZGT2 675 aa8.67□□□□□ -1.02
CPS1-203ENST00000430249 PRKRIP1Q9H875 184 aaPredicted RBP8.67□□□□□ -1.02
CPS1-203ENST00000430249 PRDM2Q13029 1718 aa8.67□□□□□ -1.02
CPS1-203ENST00000430249 MFAP1P55081 439 aaKnown RBP8.67□□□□□ -1.02
CPS1-203ENST00000430249 GOLGA6L1Q8N7Z2 621 aa8.66□□□□□ -1.02
CPS1-203ENST00000430249 SOX12O15370 315 aa8.66□□□□□ -1.02
CPS1-203ENST00000430249 ANKRD50Q9ULJ7 1429 aa8.66□□□□□ -1.02
CPS1-203ENST00000430249 DIAPH1O60610 1272 aaKnown RBP8.66□□□□□ -1.02
CPS1-203ENST00000430249 RUNDC1Q96C34 613 aa8.66□□□□□ -1.02
CPS1-203ENST00000430249 ARHGAP5Q13017 1502 aa8.66□□□□□ -1.02
CPS1-203ENST00000430249 CPLX2Q6PUV4 134 aaKnown RBP8.65□□□□□ -1.02
CPS1-203ENST00000430249 GNAI1P63096 354 aa8.65□□□□□ -1.02
CPS1-203ENST00000430249 ST20-MTHFSA0A0A6YYL1 179 aa8.65□□□□□ -1.02
CPS1-203ENST00000430249 HOOK1Q9UJC3 728 aaKnown RBP8.65□□□□□ -1.03
CPS1-203ENST00000430249 TPM3P06753 285 aa8.65□□□□□ -1.03
CPS1-203ENST00000430249 SYNE3Q6ZMZ3 975 aa8.65□□□□□ -1.03
CPS1-203ENST00000430249 CCDC7Q96M83 1385 aa8.64□□□□□ -1.03
CPS1-203ENST00000430249 HMGB2P26583 209 aaKnown RBP8.64□□□□□ -1.03
CPS1-203ENST00000430249 G3V3G9 751 aa8.64□□□□□ -1.03
CPS1-203ENST00000430249 DCAF8Q5TAQ9 597 aa8.64□□□□□ -1.03
CPS1-203ENST00000430249 RNF20Q5VTR2 975 aa8.64□□□□□ -1.03
CPS1-203ENST00000430249 NOL10Q9BSC4 688 aaKnown RBP8.64□□□□□ -1.03
CPS1-203ENST00000430249 ISY1Q9ULR0 285 aaKnown RBP8.64□□□□□ -1.03
CPS1-203ENST00000430249 TTC5Q8N0Z6 440 aa8.64□□□□□ -1.03
CPS1-203ENST00000430249 CCDC47Q96A33 483 aaKnown RBP8.64□□□□□ -1.03
CPS1-203ENST00000430249 DNMBPQ6XZF7 1577 aa8.64□□□□□ -1.03
CPS1-203ENST00000430249 TPM1P09493 284 aa8.64□□□□□ -1.03
CPS1-203ENST00000430249 TPRNQ4KMQ1 711 aa8.64□□□□□ -1.03
CPS1-203ENST00000430249 CHMP3Q9Y3E7 222 aa8.64□□□□□ -1.03
CPS1-203ENST00000430249 TRAK1Q9UPV9 953 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms