RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 RGL3Q3MIN7 710 aa19.07■□□□□ 0.64
TPM3P9-201ENST00000424846 MAGI1Q96QZ7 1491 aaPredicted RBP19.07■□□□□ 0.64
TPM3P9-201ENST00000424846 ARHGEF12Q9NZN5 1544 aa19.07■□□□□ 0.64
TPM3P9-201ENST00000424846 SYNJ2O15056 1496 aa19.07■□□□□ 0.64
TPM3P9-201ENST00000424846 BRD4O60885 1362 aaPredicted RBP19.05■□□□□ 0.64
TPM3P9-201ENST00000424846 CARMIL2Q6F5E8 1435 aa19.05■□□□□ 0.64
TPM3P9-201ENST00000424846 ABCA8O94911 1581 aa19.04■□□□□ 0.64
TPM3P9-201ENST00000424846 RRP1P56182 461 aaKnown RBP19.04■□□□□ 0.64
TPM3P9-201ENST00000424846 CDCA7LQ96GN5 454 aa19.04■□□□□ 0.64
TPM3P9-201ENST00000424846 E9PCH4 1651 aa19.04■□□□□ 0.64
TPM3P9-201ENST00000424846 SHANK2Q9UPX8 1470 aa19.04■□□□□ 0.64
TPM3P9-201ENST00000424846 PTPRGP23470 1445 aa19.03■□□□□ 0.64
TPM3P9-201ENST00000424846 KDM5DQ9BY66 1539 aa19.03■□□□□ 0.64
TPM3P9-201ENST00000424846 RALBP1Q15311 655 aa19.02■□□□□ 0.64
TPM3P9-201ENST00000424846 NUP160Q12769 1436 aa19.01■□□□□ 0.63
TPM3P9-201ENST00000424846 SKAP1Q86WV1 359 aa19.01■□□□□ 0.63
TPM3P9-201ENST00000424846 IPO9Q96P70 1041 aaKnown RBP19.01■□□□□ 0.63
TPM3P9-201ENST00000424846 RCAN3Q9UKA8 241 aa19.01■□□□□ 0.63
TPM3P9-201ENST00000424846 PER1O15534 1290 aaPredicted RBP19■□□□□ 0.63
TPM3P9-201ENST00000424846 CC2D1BQ5T0F9 858 aaKnown RBP18.99■□□□□ 0.63
TPM3P9-201ENST00000424846 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.99■□□□□ 0.638e-9■■■■■ 28
TPM3P9-201ENST00000424846 FAM135AQ9P2D6 1515 aa18.99■□□□□ 0.63
TPM3P9-201ENST00000424846 PLIN1O60240 522 aa18.98■□□□□ 0.63
TPM3P9-201ENST00000424846 ANP32AP39687 249 aaKnown RBP18.98■□□□□ 0.63
TPM3P9-201ENST00000424846 PRAG1Q86YV5 1406 aa18.98■□□□□ 0.63
TPM3P9-201ENST00000424846 PARD3Q8TEW0 1356 aa18.98■□□□□ 0.63
TPM3P9-201ENST00000424846 NPM2Q86SE8 214 aaKnown RBP18.97■□□□□ 0.63
TPM3P9-201ENST00000424846 NLRP13Q86W25 1043 aa18.97■□□□□ 0.63
TPM3P9-201ENST00000424846 ERCC6Q03468 1493 aa18.97■□□□□ 0.63
TPM3P9-201ENST00000424846 PLA2R1Q13018 1463 aa18.97■□□□□ 0.63
TPM3P9-201ENST00000424846 DISP3Q9P2K9 1392 aa18.96■□□□□ 0.63
TPM3P9-201ENST00000424846 TRPM1Q7Z4N2 1603 aa18.96■□□□□ 0.63
TPM3P9-201ENST00000424846 SAMD9LQ8IVG5 1584 aa18.96■□□□□ 0.63
TPM3P9-201ENST00000424846 KTN1Q86UP2 1357 aaKnown RBP18.96■□□□□ 0.63
TPM3P9-201ENST00000424846 CCDC144AA2RUR9 1427 aa18.94■□□□□ 0.62
TPM3P9-201ENST00000424846 TESK2Q96S53 571 aa18.94■□□□□ 0.62
TPM3P9-201ENST00000424846 ZBTB47Q9UFB7 747 aaPredicted RBP18.93■□□□□ 0.62
TPM3P9-201ENST00000424846 CDC42BPBQ9Y5S2 1711 aa18.93■□□□□ 0.62
TPM3P9-201ENST00000424846 A2MP01023 1474 aa18.93■□□□□ 0.62
TPM3P9-201ENST00000424846 ARHGEF5Q12774 1597 aa18.92■□□□□ 0.62
TPM3P9-201ENST00000424846 CCDC141Q6ZP82 1450 aa18.92■□□□□ 0.62
TPM3P9-201ENST00000424846 PANK3Q9H999 370 aa18.91■□□□□ 0.62
TPM3P9-201ENST00000424846 PDE4AP27815 886 aa18.89■□□□□ 0.61
TPM3P9-201ENST00000424846 SYCP2Q9BX26 1530 aa18.88■□□□□ 0.61
TPM3P9-201ENST00000424846 COL17A1Q9UMD9 1497 aaPredicted RBP18.88■□□□□ 0.61
TPM3P9-201ENST00000424846 MYT1LQ9UL68 1186 aa18.87■□□□□ 0.61
TPM3P9-201ENST00000424846 GPRASP1Q5JY77 1395 aa18.86■□□□□ 0.61
TPM3P9-201ENST00000424846 C20orf194Q5TEA3 1177 aa18.86■□□□□ 0.61
TPM3P9-201ENST00000424846 CRBNQ96SW2 442 aa18.86■□□□□ 0.61
TPM3P9-201ENST00000424846 PLEKHH2Q8IVE3 1493 aa18.85■□□□□ 0.61
TPM3P9-201ENST00000424846 PREX2Q70Z35 1606 aa18.85■□□□□ 0.61
TPM3P9-201ENST00000424846 TCERG1O14776 1098 aaKnown RBP18.84■□□□□ 0.61
TPM3P9-201ENST00000424846 PDE3BQ13370 1112 aa18.84■□□□□ 0.61
TPM3P9-201ENST00000424846 BACH2Q9BYV9 841 aa18.84■□□□□ 0.61
TPM3P9-201ENST00000424846 ERBINQ96RT1 1412 aa18.83■□□□□ 0.61
TPM3P9-201ENST00000424846 LAS1LQ9Y4W2 734 aaKnown RBP18.83■□□□□ 0.61
TPM3P9-201ENST00000424846 PRDM15P57071 1507 aaPredicted RBP18.83■□□□□ 0.61
TPM3P9-201ENST00000424846 TTC37Q6PGP7 1564 aa18.83■□□□□ 0.6
TPM3P9-201ENST00000424846 MYO5CQ9NQX4 1742 aa18.82■□□□□ 0.6
TPM3P9-201ENST00000424846 BLMP54132 1417 aaPredicted RBP18.82■□□□□ 0.6
TPM3P9-201ENST00000424846 ADAMTS8Q9UP79 889 aa18.82■□□□□ 0.6
TPM3P9-201ENST00000424846 ARHGAP5Q13017 1502 aa18.8■□□□□ 0.6
TPM3P9-201ENST00000424846 UNC13BO14795 1591 aa18.79■□□□□ 0.6
TPM3P9-201ENST00000424846 TMF1P82094 1093 aa18.77■□□□□ 0.6
TPM3P9-201ENST00000424846 MAGI2Q86UL8 1455 aa18.77■□□□□ 0.6
TPM3P9-201ENST00000424846 RTL5Q5HYW3 569 aaPredicted RBP18.77■□□□□ 0.6
TPM3P9-201ENST00000424846 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.77■□□□□ 0.59
TPM3P9-201ENST00000424846 PLEKHH1Q9ULM0 1364 aa18.76■□□□□ 0.59
TPM3P9-201ENST00000424846 RSPH4AQ5TD94 716 aa18.76■□□□□ 0.59
TPM3P9-201ENST00000424846 WASHC2CQ9Y4E1 1318 aa18.74■□□□□ 0.59
TPM3P9-201ENST00000424846 IQGAP3Q86VI3 1631 aa18.74■□□□□ 0.59
TPM3P9-201ENST00000424846 ZMYM4Q5VZL5 1548 aa18.74■□□□□ 0.59
TPM3P9-201ENST00000424846 LAMC1P11047 1609 aa18.73■□□□□ 0.59
TPM3P9-201ENST00000424846 MS4A1P11836 297 aa18.73■□□□□ 0.59
TPM3P9-201ENST00000424846 WDR7Q9Y4E6 1490 aa18.73■□□□□ 0.59
TPM3P9-201ENST00000424846 PPP2R1AP30153 589 aa18.72■□□□□ 0.59
TPM3P9-201ENST00000424846 MAST1Q9Y2H9 1570 aa18.72■□□□□ 0.59
TPM3P9-201ENST00000424846 ERCC6L2Q5T890 1561 aa18.71■□□□□ 0.59
TPM3P9-201ENST00000424846 DUSP27Q5VZP5 1158 aa18.7■□□□□ 0.58
TPM3P9-201ENST00000424846 NEFMP07197 916 aa18.7■□□□□ 0.58
TPM3P9-201ENST00000424846 SLC4A3P48751 1232 aa18.7■□□□□ 0.58
TPM3P9-201ENST00000424846 AMER1Q5JTC6 1135 aaPredicted RBP18.7■□□□□ 0.58
TPM3P9-201ENST00000424846 CCDC146Q8IYE0 955 aa18.68■□□□□ 0.58
TPM3P9-201ENST00000424846 KDM2BQ8NHM5 1336 aa18.68■□□□□ 0.58
TPM3P9-201ENST00000424846 EIF2AK4Q9P2K8 1649 aaKnown RBP18.68■□□□□ 0.58
TPM3P9-201ENST00000424846 PLXNC1O60486 1568 aa18.67■□□□□ 0.58
TPM3P9-201ENST00000424846 RNF17Q9BXT8 1623 aaKnown RBP18.67■□□□□ 0.58
TPM3P9-201ENST00000424846 KNSTRNQ9Y448 316 aa18.67■□□□□ 0.58
TPM3P9-201ENST00000424846 SPINK5Q9NQ38 1064 aaPredicted RBP18.67■□□□□ 0.58
TPM3P9-201ENST00000424846 ATP10AO60312 1499 aa18.66■□□□□ 0.58
TPM3P9-201ENST00000424846 INSRP06213 1382 aa18.66■□□□□ 0.58
TPM3P9-201ENST00000424846 ZNF521Q96K83 1311 aa18.65■□□□□ 0.58
TPM3P9-201ENST00000424846 WDR43Q15061 677 aaKnown RBP eCLIP18.65■□□□□ 0.58
TPM3P9-201ENST00000424846 DUOX2Q9NRD8 1548 aa18.65■□□□□ 0.58
TPM3P9-201ENST00000424846 TRAPPC8Q9Y2L5 1435 aa18.64■□□□□ 0.57
TPM3P9-201ENST00000424846 IL27Q8NEV9 243 aa18.64■□□□□ 0.57
TPM3P9-201ENST00000424846 MADDQ8WXG6 1647 aa18.63■□□□□ 0.57
TPM3P9-201ENST00000424846 CHD1O14646 1710 aa18.61■□□□□ 0.57
TPM3P9-201ENST00000424846 GOLGA2Q08379 1002 aa18.61■□□□□ 0.57
TPM3P9-201ENST00000424846 AFAP1Q8N556 730 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms