RNA–Protein interactions for RNA: ENST00000424326.5

SCN7A-203, Transcript of sodium voltage-gated channel alpha subunit 7, humanhuman

TSL 1 (best)

Gene SCN7A, Length 5,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN7A-203ENST00000424326 SENP3Q9H4L4 574 aaPredicted RBP10.14□□□□□ -0.79
SCN7A-203ENST00000424326 MAPK8IP3Q9UPT6 1336 aa10.14□□□□□ -0.79
SCN7A-203ENST00000424326 RPGRIP1LQ68CZ1 1315 aa10.14□□□□□ -0.79
SCN7A-203ENST00000424326 DENND4BO75064 1496 aaPredicted RBP10.14□□□□□ -0.79
SCN7A-203ENST00000424326 CEP170Q5SW79 1584 aa10.13□□□□□ -0.79
SCN7A-203ENST00000424326 TCOF1Q13428 1488 aaKnown RBP10.13□□□□□ -0.79
SCN7A-203ENST00000424326 ASXL2Q76L83 1435 aa10.13□□□□□ -0.79
SCN7A-203ENST00000424326 USP47Q96K76 1375 aa10.13□□□□□ -0.79
SCN7A-203ENST00000424326 NCOA1Q15788 1441 aa10.12□□□□□ -0.79
SCN7A-203ENST00000424326 EVC2Q86UK5 1308 aa10.12□□□□□ -0.79
SCN7A-203ENST00000424326 HAP1P54257 671 aaPredicted RBP10.12□□□□□ -0.79
SCN7A-203ENST00000424326 SCAF1Q9H7N4 1312 aaKnown RBP10.12□□□□□ -0.79
SCN7A-203ENST00000424326 CC2D1BQ5T0F9 858 aaKnown RBP10.12□□□□□ -0.79
SCN7A-203ENST00000424326 ST20-MTHFSA0A0A6YYL1 179 aa10.09□□□□□ -0.79
SCN7A-203ENST00000424326 ANKRD30BQ9BXX2 1392 aa10.09□□□□□ -0.79
SCN7A-203ENST00000424326 SHANK2Q9UPX8 1470 aa10.09□□□□□ -0.79
SCN7A-203ENST00000424326 SALL2Q9Y467 1007 aaPredicted RBP10.09□□□□□ -0.79
SCN7A-203ENST00000424326 SAFB2Q14151 953 aaKnown RBP eCLIP10.08□□□□□ -0.8
SCN7A-203ENST00000424326 FKBP8Q14318 412 aa10.08□□□□□ -0.8
SCN7A-203ENST00000424326 UHRF1BP1LA0JNW5 1464 aa10.08□□□□□ -0.8
SCN7A-203ENST00000424326 RAPGEF3O95398 923 aa10.08□□□□□ -0.8
SCN7A-203ENST00000424326 DHX29Q7Z478 1369 aaKnown RBP10.08□□□□□ -0.8
SCN7A-203ENST00000424326 ERBINQ96RT1 1412 aa10.08□□□□□ -0.8
SCN7A-203ENST00000424326 DUOX2Q9NRD8 1548 aa10.07□□□□□ -0.8
SCN7A-203ENST00000424326 PPM1GO15355 546 aaPredicted RBP10.07□□□□□ -0.8
SCN7A-203ENST00000424326 TRAK1Q9UPV9 953 aa10.07□□□□□ -0.8
SCN7A-203ENST00000424326 ZNF518AQ6AHZ1 1483 aa10.07□□□□□ -0.8
SCN7A-203ENST00000424326 MS4A1P11836 297 aa10.07□□□□□ -0.8
SCN7A-203ENST00000424326 CHMP4BQ9H444 224 aaKnown RBP10.06□□□□□ -0.8
SCN7A-203ENST00000424326 NLRP13Q86W25 1043 aa10.06□□□□□ -0.8
SCN7A-203ENST00000424326 RTEL1-TNFRSF6BF6WH68 1400 aa10.06□□□□□ -0.8
SCN7A-203ENST00000424326 ZBTB7CA1YPR0 619 aa10.06□□□□□ -0.8
SCN7A-203ENST00000424326 CENPJQ9HC77 1338 aaPredicted RBP10.06□□□□□ -0.8
SCN7A-203ENST00000424326 CALD1Q05682 793 aaKnown RBP10.05□□□□□ -0.8
SCN7A-203ENST00000424326 THEMISQ8N1K5 641 aaPredicted RBP10.05□□□□□ -0.8
SCN7A-203ENST00000424326 ABCC10Q5T3U5 1492 aa10.04□□□□□ -0.8
SCN7A-203ENST00000424326 LMOD2Q6P5Q4 547 aa10.04□□□□□ -0.8
SCN7A-203ENST00000424326 CGNL1Q0VF96 1302 aa10.04□□□□□ -0.8
SCN7A-203ENST00000424326 U2SURPO15042 1029 aaKnown RBP10.03□□□□□ -0.8
SCN7A-203ENST00000424326 NUTM2DQ5VT03 806 aaPredicted RBP10.03□□□□□ -0.8
SCN7A-203ENST00000424326 CCDC136Q96JN2 1154 aa10.03□□□□□ -0.8
SCN7A-203ENST00000424326 MYBBP1AQ9BQG0 1328 aaKnown RBP10.03□□□□□ -0.8
SCN7A-203ENST00000424326 MYH16Q9H6N6 1097 aa10.03□□□□□ -0.8
SCN7A-203ENST00000424326 NPM2Q86SE8 214 aaKnown RBP10.03□□□□□ -0.8
SCN7A-203ENST00000424326 CHMP4AQ9BY43 222 aa10.03□□□□□ -0.8
SCN7A-203ENST00000424326 TNNT2P45379 298 aaPredicted RBP10.02□□□□□ -0.8
SCN7A-203ENST00000424326 ABCA8O94911 1581 aa10.02□□□□□ -0.81
SCN7A-203ENST00000424326 NGDNQ8NEJ9 315 aaKnown RBP10.02□□□□□ -0.81
SCN7A-203ENST00000424326 CCDC7Q96M83 1385 aa10.01□□□□□ -0.81
SCN7A-203ENST00000424326 SYCP2Q9BX26 1530 aa10.01□□□□□ -0.81
SCN7A-203ENST00000424326 WASHC2AQ641Q2 1341 aa10.01□□□□□ -0.81
SCN7A-203ENST00000424326 NGEFQ8N5V2 710 aa10.01□□□□□ -0.81
SCN7A-203ENST00000424326 PANK3Q9H999 370 aa10.01□□□□□ -0.81
SCN7A-203ENST00000424326 A2MP01023 1474 aa9.99□□□□□ -0.81
SCN7A-203ENST00000424326 PDE3BQ13370 1112 aa9.99□□□□□ -0.81
SCN7A-203ENST00000424326 DNMT1P26358 1616 aaKnown RBP9.99□□□□□ -0.81
SCN7A-203ENST00000424326 CFAP74Q9C0B2 1584 aa9.99□□□□□ -0.81
SCN7A-203ENST00000424326 EIF5BO60841 1220 aaKnown RBP9.99□□□□□ -0.81
SCN7A-203ENST00000424326 KDM5BQ9UGL1 1544 aa9.99□□□□□ -0.81
SCN7A-203ENST00000424326 UPF2Q9HAU5 1272 aaKnown RBP9.99□□□□□ -0.81
SCN7A-203ENST00000424326 ADGRL2O95490 1459 aa9.98□□□□□ -0.81
SCN7A-203ENST00000424326 CHD1O14646 1710 aa9.98□□□□□ -0.81
SCN7A-203ENST00000424326 CNTLNQ9NXG0 1405 aa9.98□□□□□ -0.81
SCN7A-203ENST00000424326 RPRD2Q5VT52 1461 aaKnown RBP9.98□□□□□ -0.81
SCN7A-203ENST00000424326 NEO1Q92859 1461 aa9.98□□□□□ -0.81
SCN7A-203ENST00000424326 PAK3O75914 559 aaPredicted RBP9.97□□□□□ -0.81
SCN7A-203ENST00000424326 LMOD3Q0VAK6 560 aa9.97□□□□□ -0.81
SCN7A-203ENST00000424326 TXNDC2Q86VQ3 553 aa9.97□□□□□ -0.81
SCN7A-203ENST00000424326 RTF1Q92541 710 aaKnown RBP9.97□□□□□ -0.81
SCN7A-203ENST00000424326 ERICH6BQ5W0A0 696 aa9.97□□□□□ -0.81
SCN7A-203ENST00000424326 PRKRIP1Q9H875 184 aaPredicted RBP9.97□□□□□ -0.81
SCN7A-203ENST00000424326 FAM135AQ9P2D6 1515 aa9.97□□□□□ -0.81
SCN7A-203ENST00000424326 KIF7Q2M1P5 1343 aa9.97□□□□□ -0.81
SCN7A-203ENST00000424326 COG3Q96JB2 828 aa9.97□□□□□ -0.81
SCN7A-203ENST00000424326 MINK1Q8N4C8 1332 aaPredicted RBP9.96□□□□□ -0.81
SCN7A-203ENST00000424326 U2AF1L5P0DN76 240 aaPredicted RBP9.96□□□□□ -0.81
SCN7A-203ENST00000424326 ANP32AP39687 249 aaKnown RBP9.96□□□□□ -0.81
SCN7A-203ENST00000424326 U2AF1Q01081 240 aaKnown RBP eCLIP9.96□□□□□ -0.81
SCN7A-203ENST00000424326 NEUROD2Q15784 382 aa9.95□□□□□ -0.82
SCN7A-203ENST00000424326 CFAP70Q5T0N1 1121 aa9.95□□□□□ -0.82
SCN7A-203ENST00000424326 FTSJ3Q8IY81 847 aaKnown RBP9.95□□□□□ -0.82
SCN7A-203ENST00000424326 PTPRKQ15262 1439 aa9.95□□□□□ -0.82
SCN7A-203ENST00000424326 ARHGEF5Q12774 1597 aa9.95□□□□□ -0.82
SCN7A-203ENST00000424326 ANKLE2Q86XL3 938 aa9.95□□□□□ -0.82
SCN7A-203ENST00000424326 TRAPPC8Q9Y2L5 1435 aa9.94□□□□□ -0.82
SCN7A-203ENST00000424326 MYT1Q01538 1121 aa9.94□□□□□ -0.82
SCN7A-203ENST00000424326 MAPKBP1O60336 1514 aa9.94□□□□□ -0.82
SCN7A-203ENST00000424326 PLEKHG5O94827 1062 aa9.93□□□□□ -0.82
SCN7A-203ENST00000424326 LAS1LQ9Y4W2 734 aaKnown RBP9.92□□□□□ -0.82
SCN7A-203ENST00000424326 IPO8O15397 1037 aaKnown RBP9.92□□□□□ -0.82
SCN7A-203ENST00000424326 AMPHP49418 695 aa9.92□□□□□ -0.82
SCN7A-203ENST00000424326 NBPF8Q3BBV2 869 aa9.92□□□□□ -0.82
SCN7A-203ENST00000424326 RTL5Q5HYW3 569 aaPredicted RBP9.92□□□□□ -0.82
SCN7A-203ENST00000424326 PPP4R2Q9NY27 417 aa9.92□□□□□ -0.82
SCN7A-203ENST00000424326 ATAD2Q6PL18 1390 aa9.91□□□□□ -0.82
SCN7A-203ENST00000424326 SUPT16HQ9Y5B9 1047 aaKnown RBP9.91□□□□□ -0.82
SCN7A-203ENST00000424326 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.91□□□□□ -0.82
SCN7A-203ENST00000424326 ZNF692Q9BU19 519 aaPredicted RBP9.91□□□□□ -0.82
SCN7A-203ENST00000424326 ATF3P18847 181 aa9.9□□□□□ -0.82
SCN7A-203ENST00000424326 MYO5CQ9NQX4 1742 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms