RNA–Protein interactions for RNA: ENST00000422242.1

RAB5A-203, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 2 BASIC

Gene RAB5A, Length 1,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-203ENST00000422242 KIF27Q86VH2 1401 aa17.6■□□□□ 0.41
RAB5A-203ENST00000422242 KIF3CO14782 793 aa17.59■□□□□ 0.41
RAB5A-203ENST00000422242 IRF6O14896 467 aa17.58■□□□□ 0.41
RAB5A-203ENST00000422242 TMEM121BQ9BXQ6 578 aaPredicted RBP17.58■□□□□ 0.41
RAB5A-203ENST00000422242 RSPH6AQ9H0K4 717 aa17.58■□□□□ 0.41
RAB5A-203ENST00000422242 BOLA1Q9Y3E2 137 aa17.58■□□□□ 0.41
RAB5A-203ENST00000422242 PLEKHG3A1L390 1219 aa17.56■□□□□ 0.4
RAB5A-203ENST00000422242 OSBPP22059 807 aa17.56■□□□□ 0.4
RAB5A-203ENST00000422242 UPF1Q92900 1129 aaKnown RBP eCLIP17.55■□□□□ 0.42e-9■■□□□ 11.7
RAB5A-203ENST00000422242 EIF4G3O43432 1585 aaKnown RBP17.55■□□□□ 0.4
RAB5A-203ENST00000422242 GNPATO15228 680 aa17.55■□□□□ 0.4
RAB5A-203ENST00000422242 PBRM1Q86U86 1689 aa17.54■□□□□ 0.4
RAB5A-203ENST00000422242 AMHR2Q16671 573 aa17.54■□□□□ 0.4
RAB5A-203ENST00000422242 PARP9Q8IXQ6 854 aa17.54■□□□□ 0.4
RAB5A-203ENST00000422242 DDRGK1Q96HY6 314 aa17.54■□□□□ 0.4
RAB5A-203ENST00000422242 IRX5P78411 483 aaPredicted RBP17.53■□□□□ 0.4
RAB5A-203ENST00000422242 RUSC2Q8N2Y8 1516 aa17.53■□□□□ 0.4
RAB5A-203ENST00000422242 GAPVD1Q14C86 1478 aa17.53■□□□□ 0.4
RAB5A-203ENST00000422242 ZNF608Q9ULD9 1512 aaPredicted RBP17.52■□□□□ 0.4
RAB5A-203ENST00000422242 G3V3G9 751 aa17.52■□□□□ 0.4
RAB5A-203ENST00000422242 ERICH3Q5RHP9 1530 aa17.51■□□□□ 0.39
RAB5A-203ENST00000422242 ATN1P54259 1190 aaPredicted RBP17.51■□□□□ 0.39
RAB5A-203ENST00000422242 OCEL1Q9H607 264 aa17.51■□□□□ 0.39
RAB5A-203ENST00000422242 FECHP22830 423 aa17.5■□□□□ 0.39
RAB5A-203ENST00000422242 FCHSD2O94868 740 aa17.49■□□□□ 0.39
RAB5A-203ENST00000422242 HIC1Q14526 733 aa17.49■□□□□ 0.39
RAB5A-203ENST00000422242 DDX12PQ92771 950 aa17.49■□□□□ 0.39
RAB5A-203ENST00000422242 TDRD9Q8NDG6 1382 aaKnown RBP17.49■□□□□ 0.39
RAB5A-203ENST00000422242 CUL7Q14999 1698 aa17.48■□□□□ 0.39
RAB5A-203ENST00000422242 UBTFP17480 764 aaKnown RBP17.47■□□□□ 0.39
RAB5A-203ENST00000422242 AQRO60306 1485 aaKnown RBP eCLIP17.46■□□□□ 0.392e-6■■■□□ 15.4
RAB5A-203ENST00000422242 PTGER2P43116 358 aa17.46■□□□□ 0.39
RAB5A-203ENST00000422242 OXER1Q8TDS5 423 aa17.46■□□□□ 0.39
RAB5A-203ENST00000422242 GRIN2BQ13224 1484 aa17.46■□□□□ 0.38
RAB5A-203ENST00000422242 IGF1RP08069 1367 aa17.43■□□□□ 0.38
RAB5A-203ENST00000422242 KIF21BO75037 1637 aa17.42■□□□□ 0.38
RAB5A-203ENST00000422242 TTLL12Q14166 644 aaPredicted RBP17.42■□□□□ 0.38
RAB5A-203ENST00000422242 PRIM1P49642 420 aaKnown RBP17.41■□□□□ 0.38
RAB5A-203ENST00000422242 IER5LQ5T953 404 aa17.41■□□□□ 0.38
RAB5A-203ENST00000422242 ATMINO43313 823 aaPredicted RBP17.4■□□□□ 0.38
RAB5A-203ENST00000422242 TMEM92Q6UXU6 159 aa17.4■□□□□ 0.38
RAB5A-203ENST00000422242 MAGI1Q96QZ7 1491 aaPredicted RBP17.39■□□□□ 0.38
RAB5A-203ENST00000422242 ADAMTS12P58397 1594 aa17.39■□□□□ 0.37
RAB5A-203ENST00000422242 PRXQ9BXM0 1461 aa17.39■□□□□ 0.37
RAB5A-203ENST00000422242 FAM9AQ8IZU1 332 aaPredicted RBP17.38■□□□□ 0.37
RAB5A-203ENST00000422242 TBC1D12O60347 775 aa17.38■□□□□ 0.37
RAB5A-203ENST00000422242 PLCG2P16885 1265 aa17.37■□□□□ 0.37
RAB5A-203ENST00000422242 PTGDRQ13258 359 aa17.36■□□□□ 0.37
RAB5A-203ENST00000422242 EVI5O60447 810 aa17.35■□□□□ 0.37
RAB5A-203ENST00000422242 ASTLQ6HA08 431 aaPredicted RBP17.35■□□□□ 0.37
RAB5A-203ENST00000422242 SNAPC4Q5SXM2 1469 aa17.35■□□□□ 0.37
RAB5A-203ENST00000422242 FHAD1B1AJZ9 1412 aa17.34■□□□□ 0.37
RAB5A-203ENST00000422242 CARMIL1Q5VZK9 1371 aa17.34■□□□□ 0.37
RAB5A-203ENST00000422242 L3MBTL3Q96JM7 780 aaPredicted RBP17.34■□□□□ 0.37
RAB5A-203ENST00000422242 ARID3AQ99856 593 aa17.34■□□□□ 0.37
RAB5A-203ENST00000422242 FLIIQ13045 1269 aa17.33■□□□□ 0.36
RAB5A-203ENST00000422242 C1orf115Q9H7X2 142 aa17.33■□□□□ 0.36
RAB5A-203ENST00000422242 RAPGEF2Q9Y4G8 1499 aa17.32■□□□□ 0.36
RAB5A-203ENST00000422242 CLCN6P51797 869 aa17.32■□□□□ 0.36
RAB5A-203ENST00000422242 GOPCQ9HD26 462 aa17.32■□□□□ 0.36
RAB5A-203ENST00000422242 GIGYF2Q6Y7W6 1299 aaKnown RBP17.31■□□□□ 0.36
RAB5A-203ENST00000422242 SYNJ2O15056 1496 aa17.3■□□□□ 0.36
RAB5A-203ENST00000422242 GOLGA3Q08378 1498 aa17.3■□□□□ 0.36
RAB5A-203ENST00000422242 MS4A1P11836 297 aa17.3■□□□□ 0.36
RAB5A-203ENST00000422242 ARID3CA6NKF2 412 aa17.27■□□□□ 0.35
RAB5A-203ENST00000422242 REPIN1Q9BWE0 567 aaKnown RBP17.27■□□□□ 0.35
RAB5A-203ENST00000422242 CHD1O14646 1710 aa17.26■□□□□ 0.35
RAB5A-203ENST00000422242 HAX1O00165 279 aa17.26■□□□□ 0.35
RAB5A-203ENST00000422242 EVX2Q03828 476 aa17.26■□□□□ 0.35
RAB5A-203ENST00000422242 GRIN2AQ12879 1464 aa17.25■□□□□ 0.35
RAB5A-203ENST00000422242 PCMTD1Q96MG8 357 aaPredicted RBP17.24■□□□□ 0.35
RAB5A-203ENST00000422242 PODXL2Q9NZ53 605 aa17.24■□□□□ 0.35
RAB5A-203ENST00000422242 CTTNBP2Q8WZ74 1663 aa17.24■□□□□ 0.35
RAB5A-203ENST00000422242 ONECUT3O60422 494 aaPredicted RBP17.23■□□□□ 0.35
RAB5A-203ENST00000422242 APBB1O00213 710 aa17.22■□□□□ 0.35
RAB5A-203ENST00000422242 CDHR5Q9HBB8 845 aa17.21■□□□□ 0.35
RAB5A-203ENST00000422242 PTCD2Q8WV60 388 aaKnown RBP17.2■□□□□ 0.34
RAB5A-203ENST00000422242 CHMP7Q8WUX9 453 aaPredicted RBP17.18■□□□□ 0.34
RAB5A-203ENST00000422242 NPDC1Q9NQX5 325 aaPredicted RBP17.18■□□□□ 0.34
RAB5A-203ENST00000422242 SEC24BO95487 1268 aa17.17■□□□□ 0.34
RAB5A-203ENST00000422242 COLQQ9Y215 455 aaPredicted RBP17.17■□□□□ 0.34
RAB5A-203ENST00000422242 EN1Q05925 392 aaPredicted RBP17.16■□□□□ 0.34
RAB5A-203ENST00000422242 ANO8Q9HCE9 1232 aaPredicted RBP17.16■□□□□ 0.34
RAB5A-203ENST00000422242 TNIKQ9UKE5 1360 aa17.16■□□□□ 0.34
RAB5A-203ENST00000422242 NUP160Q12769 1436 aa17.16■□□□□ 0.34
RAB5A-203ENST00000422242 CEP170Q5SW79 1584 aa17.14■□□□□ 0.34
RAB5A-203ENST00000422242 CLCN1P35523 988 aa17.14■□□□□ 0.33
RAB5A-203ENST00000422242 CLUAP1Q96AJ1 413 aa17.14■□□□□ 0.33
RAB5A-203ENST00000422242 TMUB1Q9BVT8 246 aa17.14■□□□□ 0.33
RAB5A-203ENST00000422242 LOC105371045A0A1W2PR82 267 aa17.13■□□□□ 0.33
RAB5A-203ENST00000422242 MAP3K7O43318 606 aa17.13■□□□□ 0.33
RAB5A-203ENST00000422242 MDM2Q00987 491 aaPredicted RBP17.13■□□□□ 0.33
RAB5A-203ENST00000422242 SH3D19Q5HYK7 790 aa17.13■□□□□ 0.33
RAB5A-203ENST00000422242 RBM33Q96EV2 1170 aaKnown RBP17.12■□□□□ 0.33
RAB5A-203ENST00000422242 PHOX2BQ99453 314 aa17.12■□□□□ 0.33
RAB5A-203ENST00000422242 GPCPD1Q9NPB8 672 aa17.12■□□□□ 0.33
RAB5A-203ENST00000422242 PHF14O94880 888 aa17.11■□□□□ 0.33
RAB5A-203ENST00000422242 EPAS1Q99814 870 aa17.11■□□□□ 0.33
RAB5A-203ENST00000422242 IQGAP2Q13576 1575 aa17.1■□□□□ 0.33
RAB5A-203ENST00000422242 KIAA0586Q9BVV6 1533 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms