RNA–Protein interactions for RNA: ENST00000422202.5

COL20A1-203, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL20A1, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-203ENST00000422202 SMC4Q9NTJ3 1288 aa16.81■□□□□ 0.28
COL20A1-203ENST00000422202 CHMP4AQ9BY43 222 aa16.81■□□□□ 0.28
COL20A1-203ENST00000422202 CCDC70Q6NSX1 233 aa16.81■□□□□ 0.28
COL20A1-203ENST00000422202 FAM184AQ8NB25 1140 aa16.8■□□□□ 0.28
COL20A1-203ENST00000422202 EID1Q9Y6B2 187 aa16.8■□□□□ 0.28
COL20A1-203ENST00000422202 HMMRO75330 724 aa16.8■□□□□ 0.28
COL20A1-203ENST00000422202 HDAC5Q9UQL6 1122 aa16.8■□□□□ 0.28
COL20A1-203ENST00000422202 NGEFQ8N5V2 710 aa16.8■□□□□ 0.28
COL20A1-203ENST00000422202 TPM1P09493 284 aa16.8■□□□□ 0.28
COL20A1-203ENST00000422202 VPS37DQ86XT2 251 aa16.79■□□□□ 0.28
COL20A1-203ENST00000422202 CCDC43Q96MW1 224 aaKnown RBP16.79■□□□□ 0.28
COL20A1-203ENST00000422202 KTN1Q86UP2 1357 aaKnown RBP16.79■□□□□ 0.28
COL20A1-203ENST00000422202 FOXD4L6Q3SYB3 417 aaPredicted RBP16.79■□□□□ 0.28
COL20A1-203ENST00000422202 FOXD4L3Q6VB84 417 aaPredicted RBP16.79■□□□□ 0.28
COL20A1-203ENST00000422202 GOLGA3Q08378 1498 aa16.79■□□□□ 0.28
COL20A1-203ENST00000422202 RRP12Q5JTH9 1297 aaKnown RBP16.78■□□□□ 0.28
COL20A1-203ENST00000422202 DHX16O60231 1041 aaKnown RBP16.78■□□□□ 0.28
COL20A1-203ENST00000422202 KIF3AQ9Y496 699 aa16.78■□□□□ 0.28
COL20A1-203ENST00000422202 RILPL2Q969X0 211 aa16.78■□□□□ 0.28
COL20A1-203ENST00000422202 GOLGA6L19H0YKK7 550 aa16.78■□□□□ 0.28
COL20A1-203ENST00000422202 ROCK2O75116 1388 aaKnown RBP16.78■□□□□ 0.28
COL20A1-203ENST00000422202 SUGP2Q8IX01 1082 aaKnown RBP eCLIP16.77■□□□□ 0.28
COL20A1-203ENST00000422202 MCTP1Q6DN14 999 aa16.77■□□□□ 0.28
COL20A1-203ENST00000422202 SYNE3Q6ZMZ3 975 aa16.77■□□□□ 0.28
COL20A1-203ENST00000422202 SYTL4Q96C24 671 aaPredicted RBP16.77■□□□□ 0.28
COL20A1-203ENST00000422202 NUTM2DQ5VT03 806 aaPredicted RBP16.77■□□□□ 0.27
COL20A1-203ENST00000422202 PMFBP1Q8TBY8 1022 aa16.77■□□□□ 0.27
COL20A1-203ENST00000422202 PPP1R1BQ9UD71 204 aaPredicted RBP16.76■□□□□ 0.27
COL20A1-203ENST00000422202 ODF2Q5BJF6 829 aa16.76■□□□□ 0.27
COL20A1-203ENST00000422202 CALRP27797 417 aaKnown RBP16.74■□□□□ 0.27
COL20A1-203ENST00000422202 APPP05067 770 aa16.74■□□□□ 0.27
COL20A1-203ENST00000422202 GOLGA6L3A6NEY3 463 aa16.74■□□□□ 0.27
COL20A1-203ENST00000422202 ST18O60284 1047 aa16.74■□□□□ 0.27
COL20A1-203ENST00000422202 C1orf141Q5JVX7 400 aa16.74■□□□□ 0.27
COL20A1-203ENST00000422202 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.73■□□□□ 0.27
COL20A1-203ENST00000422202 CCDC146Q8IYE0 955 aa16.72■□□□□ 0.27
COL20A1-203ENST00000422202 TRIM29Q14134 588 aa16.71■□□□□ 0.27
COL20A1-203ENST00000422202 CT47A1Q5JQC4 288 aaPredicted RBP16.71■□□□□ 0.27
COL20A1-203ENST00000422202 RCAN3Q9UKA8 241 aa16.71■□□□□ 0.26
COL20A1-203ENST00000422202 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.7■□□□□ 0.26
COL20A1-203ENST00000422202 TCERG1O14776 1098 aaKnown RBP16.7■□□□□ 0.26
COL20A1-203ENST00000422202 ZNF592Q92610 1267 aa16.7■□□□□ 0.26
COL20A1-203ENST00000422202 NAP1L1P55209 391 aaKnown RBP16.69■□□□□ 0.26
COL20A1-203ENST00000422202 ZFYVE27Q5T4F4 411 aa16.69■□□□□ 0.26
COL20A1-203ENST00000422202 BECN2A8MW95 431 aa16.69■□□□□ 0.26
COL20A1-203ENST00000422202 PAF1Q8N7H5 531 aa16.69■□□□□ 0.26
COL20A1-203ENST00000422202 R3HCC1Q9Y3T6 440 aaKnown RBP16.69■□□□□ 0.26
COL20A1-203ENST00000422202 CEP162Q5TB80 1403 aa16.69■□□□□ 0.26
COL20A1-203ENST00000422202 FOXD1Q16676 465 aa16.68■□□□□ 0.26
COL20A1-203ENST00000422202 CLUAP1Q96AJ1 413 aa16.68■□□□□ 0.26
COL20A1-203ENST00000422202 GPS2Q13227 327 aa16.67■□□□□ 0.26
COL20A1-203ENST00000422202 CCDC47Q96A33 483 aaKnown RBP16.67■□□□□ 0.26
COL20A1-203ENST00000422202 TERF2IPQ9NYB0 399 aa16.67■□□□□ 0.26
COL20A1-203ENST00000422202 EIF3AQ14152 1382 aaKnown RBP16.67■□□□□ 0.26
COL20A1-203ENST00000422202 NACADO15069 1562 aa16.67■□□□□ 0.26
COL20A1-203ENST00000422202 KIF27Q86VH2 1401 aa16.66■□□□□ 0.26
COL20A1-203ENST00000422202 IPO7O95373 1038 aaKnown RBP16.66■□□□□ 0.26
COL20A1-203ENST00000422202 EPS15P42566 896 aa16.65■□□□□ 0.26
COL20A1-203ENST00000422202 SF3B2Q13435 895 aaKnown RBP16.65■□□□□ 0.26
COL20A1-203ENST00000422202 TMEM132AQ24JP5 1023 aa16.65■□□□□ 0.26
COL20A1-203ENST00000422202 LRRFIP1Q32MZ4 808 aaKnown RBP16.65■□□□□ 0.26
COL20A1-203ENST00000422202 ANKRD20A12PQ8NF67 263 aa16.65■□□□□ 0.26
COL20A1-203ENST00000422202 LMOD3Q0VAK6 560 aa16.64■□□□□ 0.25
COL20A1-203ENST00000422202 CCAR1Q8IX12 1150 aaKnown RBP16.64■□□□□ 0.25
COL20A1-203ENST00000422202 NFXL1Q6ZNB6 911 aa16.64■□□□□ 0.25
COL20A1-203ENST00000422202 BAZ1BQ9UIG0 1483 aaKnown RBP16.63■□□□□ 0.25
COL20A1-203ENST00000422202 WWC2Q6AWC2 1192 aa16.63■□□□□ 0.25
COL20A1-203ENST00000422202 FYB1O15117 783 aa16.63■□□□□ 0.25
COL20A1-203ENST00000422202 HSP90AB2PQ58FF8 381 aa16.63■□□□□ 0.25
COL20A1-203ENST00000422202 TTC5Q8N0Z6 440 aa16.63■□□□□ 0.25
COL20A1-203ENST00000422202 ERICH2A1L162 156 aa16.62■□□□□ 0.25
COL20A1-203ENST00000422202 RBM33Q96EV2 1170 aaKnown RBP16.62■□□□□ 0.25
COL20A1-203ENST00000422202 HOOK1Q9UJC3 728 aaKnown RBP16.62■□□□□ 0.25
COL20A1-203ENST00000422202 NECTIN2Q92692 538 aa16.61■□□□□ 0.25
COL20A1-203ENST00000422202 C9orf78Q9NZ63 289 aaPredicted RBP16.61■□□□□ 0.25
COL20A1-203ENST00000422202 FOSBP53539 338 aa16.61■□□□□ 0.25
COL20A1-203ENST00000422202 EIF2S2P20042 333 aaKnown RBP16.6■□□□□ 0.25
COL20A1-203ENST00000422202 CPLX2Q6PUV4 134 aaKnown RBP16.6■□□□□ 0.25
COL20A1-203ENST00000422202 RUFY1Q96T51 708 aa16.6■□□□□ 0.25
COL20A1-203ENST00000422202 ANKRD45Q5TZF3 282 aa16.6■□□□□ 0.25
COL20A1-203ENST00000422202 PKD2Q13563 968 aa16.6■□□□□ 0.25
COL20A1-203ENST00000422202 IKQ13123 557 aaPredicted RBP16.59■□□□□ 0.25
COL20A1-203ENST00000422202 NEXNQ0ZGT2 675 aa16.59■□□□□ 0.25
COL20A1-203ENST00000422202 ZNF771Q7L3S4 317 aaPredicted RBP16.59■□□□□ 0.25
COL20A1-203ENST00000422202 MTMR7Q9Y216 660 aa16.59■□□□□ 0.25
COL20A1-203ENST00000422202 TRDNQ13061 729 aa16.58■□□□□ 0.25
COL20A1-203ENST00000422202 HOMER1Q86YM7 354 aa16.58■□□□□ 0.24
COL20A1-203ENST00000422202 CHMP4CQ96CF2 233 aa16.58■□□□□ 0.24
COL20A1-203ENST00000422202 DIAPH3Q9NSV4 1193 aa16.58■□□□□ 0.24
COL20A1-203ENST00000422202 SLC4A3P48751 1232 aa16.57■□□□□ 0.24
COL20A1-203ENST00000422202 CCDC27Q2M243 656 aa16.57■□□□□ 0.24
COL20A1-203ENST00000422202 HSPA5P11021 654 aaKnown RBP16.57■□□□□ 0.24
COL20A1-203ENST00000422202 CPLX1O14810 134 aa16.57■□□□□ 0.24
COL20A1-203ENST00000422202 ANO2Q9NQ90 1003 aa16.57■□□□□ 0.24
COL20A1-203ENST00000422202 CENPJQ9HC77 1338 aaPredicted RBP16.56■□□□□ 0.24
COL20A1-203ENST00000422202 TEFQ10587 303 aa16.56■□□□□ 0.24
COL20A1-203ENST00000422202 BCL11BQ9C0K0 894 aaPredicted RBP16.56■□□□□ 0.24
COL20A1-203ENST00000422202 ATP6V1DQ9Y5K8 247 aa16.56■□□□□ 0.24
COL20A1-203ENST00000422202 RRP7AQ9Y3A4 280 aaKnown RBP16.55■□□□□ 0.24
COL20A1-203ENST00000422202 ELL2O00472 640 aaPredicted RBP16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms