RNA–Protein interactions for RNA: ENST00000416247.3

SMIM13-202, Transcript of small integral membrane protein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMIM13, Length 4,688 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM13-202ENST00000416247 TSHZ2Q9NRE2 1034 aa20.43■□□□□ 0.86
SMIM13-202ENST00000416247 MCCP23508 829 aa20.42■□□□□ 0.86
SMIM13-202ENST00000416247 NESP48681 1621 aa20.42■□□□□ 0.86
SMIM13-202ENST00000416247 ELL2O00472 640 aaPredicted RBP20.42■□□□□ 0.86
SMIM13-202ENST00000416247 SYNJ1O43426 1573 aa20.42■□□□□ 0.86
SMIM13-202ENST00000416247 EVC2Q86UK5 1308 aa20.41■□□□□ 0.86
SMIM13-202ENST00000416247 PLIN1O60240 522 aa20.41■□□□□ 0.86
SMIM13-202ENST00000416247 SLKQ9H2G2 1235 aaPredicted RBP20.41■□□□□ 0.86
SMIM13-202ENST00000416247 CDK11BP21127 795 aaKnown RBP20.41■□□□□ 0.86
SMIM13-202ENST00000416247 PMFBP1Q8TBY8 1022 aa20.41■□□□□ 0.86
SMIM13-202ENST00000416247 CASKIN1Q8WXD9 1431 aa20.4■□□□□ 0.86
SMIM13-202ENST00000416247 CGNL1Q0VF96 1302 aa20.4■□□□□ 0.86
SMIM13-202ENST00000416247 NCOA2Q15596 1464 aa20.4■□□□□ 0.86
SMIM13-202ENST00000416247 ANKRD50Q9ULJ7 1429 aa20.4■□□□□ 0.86
SMIM13-202ENST00000416247 RTN4Q9NQC3 1192 aaKnown RBP20.4■□□□□ 0.86
SMIM13-202ENST00000416247 AFAP1Q8N556 730 aa20.39■□□□□ 0.86
SMIM13-202ENST00000416247 APAF1O14727 1248 aa20.39■□□□□ 0.85
SMIM13-202ENST00000416247 DNTTIP2Q5QJE6 756 aaKnown RBP20.38■□□□□ 0.85
SMIM13-202ENST00000416247 LMOD3Q0VAK6 560 aa20.38■□□□□ 0.85
SMIM13-202ENST00000416247 KIF7Q2M1P5 1343 aa20.37■□□□□ 0.85
SMIM13-202ENST00000416247 KIAA1211Q6ZU35 1233 aa20.36■□□□□ 0.85
SMIM13-202ENST00000416247 GOLGA6L4A6NEF3 574 aa20.36■□□□□ 0.85
SMIM13-202ENST00000416247 CFAP44Q96MT7 982 aa20.36■□□□□ 0.85
SMIM13-202ENST00000416247 GRIN2BQ13224 1484 aa20.36■□□□□ 0.85
SMIM13-202ENST00000416247 ZBED9Q6R2W3 1325 aa20.36■□□□□ 0.85
SMIM13-202ENST00000416247 MFAP1P55081 439 aaKnown RBP20.36■□□□□ 0.85
SMIM13-202ENST00000416247 FAM69CQ0P6D2 419 aa20.36■□□□□ 0.85
SMIM13-202ENST00000416247 CUX1P39880 1505 aa20.35■□□□□ 0.85
SMIM13-202ENST00000416247 COG3Q96JB2 828 aa20.35■□□□□ 0.85
SMIM13-202ENST00000416247 GLIPR1L2Q4G1C9 344 aa20.35■□□□□ 0.85
SMIM13-202ENST00000416247 CHMP4AQ9BY43 222 aa20.34■□□□□ 0.85
SMIM13-202ENST00000416247 CCDC7Q96M83 1385 aa20.32■□□□□ 0.84
SMIM13-202ENST00000416247 FYCO1Q9BQS8 1478 aa20.32■□□□□ 0.84
SMIM13-202ENST00000416247 EXOC6Q8TAG9 804 aa20.32■□□□□ 0.84
SMIM13-202ENST00000416247 HMMRO75330 724 aa20.31■□□□□ 0.84
SMIM13-202ENST00000416247 TULP1O00294 542 aaPredicted RBP20.31■□□□□ 0.84
SMIM13-202ENST00000416247 PRDM2Q13029 1718 aa20.31■□□□□ 0.84
SMIM13-202ENST00000416247 ERICH3Q5RHP9 1530 aa20.31■□□□□ 0.84
SMIM13-202ENST00000416247 PRXQ9BXM0 1461 aa20.3■□□□□ 0.84
SMIM13-202ENST00000416247 E9PSI1 815 aa20.3■□□□□ 0.84
SMIM13-202ENST00000416247 CHMP3Q9Y3E7 222 aa20.3■□□□□ 0.84
SMIM13-202ENST00000416247 RRP1P56182 461 aaKnown RBP20.29■□□□□ 0.84
SMIM13-202ENST00000416247 TRIM6-TRIM34B2RNG4 842 aa20.28■□□□□ 0.84
SMIM13-202ENST00000416247 TMEM132EQ6IEE7 984 aa20.28■□□□□ 0.84
SMIM13-202ENST00000416247 CCDC9Q9Y3X0 531 aaKnown RBP20.28■□□□□ 0.84
SMIM13-202ENST00000416247 COG6Q9Y2V7 657 aa20.28■□□□□ 0.84
SMIM13-202ENST00000416247 DEKP35659 375 aaKnown RBP20.26■□□□□ 0.83
SMIM13-202ENST00000416247 WASHC2AQ641Q2 1341 aa20.26■□□□□ 0.83
SMIM13-202ENST00000416247 CRBNQ96SW2 442 aa20.26■□□□□ 0.83
SMIM13-202ENST00000416247 PRG4Q92954 1404 aaPredicted RBP20.25■□□□□ 0.83
SMIM13-202ENST00000416247 RRBP1Q9P2E9 1410 aaKnown RBP20.24■□□□□ 0.83
SMIM13-202ENST00000416247 IPO9Q96P70 1041 aaKnown RBP20.24■□□□□ 0.83
SMIM13-202ENST00000416247 GZF1Q9H116 711 aaPredicted RBP20.24■□□□□ 0.83
SMIM13-202ENST00000416247 POLA1P09884 1462 aaPredicted RBP20.24■□□□□ 0.83
SMIM13-202ENST00000416247 TOPBP1Q92547 1522 aa20.24■□□□□ 0.83
SMIM13-202ENST00000416247 ZKSCAN2Q63HK3 967 aa20.24■□□□□ 0.83
SMIM13-202ENST00000416247 DIAPH1O60610 1272 aaKnown RBP20.23■□□□□ 0.83
SMIM13-202ENST00000416247 CFAP70Q5T0N1 1121 aa20.23■□□□□ 0.83
SMIM13-202ENST00000416247 GORABQ5T7V8 394 aa20.23■□□□□ 0.83
SMIM13-202ENST00000416247 HDAC5Q9UQL6 1122 aa20.23■□□□□ 0.83
SMIM13-202ENST00000416247 STAC3Q96MF2 364 aa20.22■□□□□ 0.83
SMIM13-202ENST00000416247 NAP1L5Q96NT1 182 aaPredicted RBP20.21■□□□□ 0.83
SMIM13-202ENST00000416247 GGNBP2Q9H3C7 697 aa20.21■□□□□ 0.83
SMIM13-202ENST00000416247 TAF7LQ5H9L4 462 aa20.2■□□□□ 0.82
SMIM13-202ENST00000416247 GBP4Q96PP9 640 aa20.2■□□□□ 0.82
SMIM13-202ENST00000416247 CENPQQ7L2Z9 268 aaPredicted RBP20.2■□□□□ 0.82
SMIM13-202ENST00000416247 SYNJ2O15056 1496 aa20.2■□□□□ 0.82
SMIM13-202ENST00000416247 RIPK4P57078 832 aa20.19■□□□□ 0.82
SMIM13-202ENST00000416247 NBPF1Q3BBV0 1214 aa20.19■□□□□ 0.82
SMIM13-202ENST00000416247 TEFQ10587 303 aa20.18■□□□□ 0.82
SMIM13-202ENST00000416247 ARHGAP5Q13017 1502 aa20.18■□□□□ 0.82
SMIM13-202ENST00000416247 CABP2Q9NPB3 220 aa20.18■□□□□ 0.82
SMIM13-202ENST00000416247 ISY1Q9ULR0 285 aaKnown RBP20.18■□□□□ 0.82
SMIM13-202ENST00000416247 NOL8Q76FK4 1167 aaKnown RBP20.18■□□□□ 0.82
SMIM13-202ENST00000416247 TOP2BQ02880 1626 aa20.17■□□□□ 0.82
SMIM13-202ENST00000416247 FOXD4L1Q9NU39 408 aa20.17■□□□□ 0.82
SMIM13-202ENST00000416247 ANKRD45Q5TZF3 282 aa20.17■□□□□ 0.82
SMIM13-202ENST00000416247 CNTLNQ9NXG0 1405 aa20.17■□□□□ 0.82
SMIM13-202ENST00000416247 PDE4AP27815 886 aa20.17■□□□□ 0.82
SMIM13-202ENST00000416247 GPATCH3Q96I76 525 aa20.16■□□□□ 0.82
SMIM13-202ENST00000416247 L1TD1Q5T7N2 865 aaKnown RBP20.16■□□□□ 0.82
SMIM13-202ENST00000416247 MRC2Q9UBG0 1479 aa20.16■□□□□ 0.82
SMIM13-202ENST00000416247 CC2D2AQ9P2K1 1620 aa20.16■□□□□ 0.82
SMIM13-202ENST00000416247 NBPF8Q3BBV2 869 aa20.15■□□□□ 0.82
SMIM13-202ENST00000416247 GNL2Q13823 731 aaKnown RBP20.15■□□□□ 0.82
SMIM13-202ENST00000416247 HMGXB3Q12766 1538 aa20.14■□□□□ 0.81
SMIM13-202ENST00000416247 C1orf141Q5JVX7 400 aa20.14■□□□□ 0.81
SMIM13-202ENST00000416247 HMOX1P09601 288 aa20.14■□□□□ 0.81
SMIM13-202ENST00000416247 MIA2Q96PC5 1412 aa20.13■□□□□ 0.81
SMIM13-202ENST00000416247 RUNDC1Q96C34 613 aa20.13■□□□□ 0.81
SMIM13-202ENST00000416247 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.13■□□□□ 0.81
SMIM13-202ENST00000416247 NECTIN2Q92692 538 aa20.13■□□□□ 0.81
SMIM13-202ENST00000416247 EIF2S2P20042 333 aaKnown RBP20.12■□□□□ 0.81
SMIM13-202ENST00000416247 NRDCO43847 1150 aa20.12■□□□□ 0.81
SMIM13-202ENST00000416247 ADAMTS8Q9UP79 889 aa20.12■□□□□ 0.81
SMIM13-202ENST00000416247 NGEFQ8N5V2 710 aa20.12■□□□□ 0.81
SMIM13-202ENST00000416247 DNAJC5BQ9UF47 199 aa20.12■□□□□ 0.81
SMIM13-202ENST00000416247 IFT140Q96RY7 1462 aa20.12■□□□□ 0.81
SMIM13-202ENST00000416247 FAM161AQ3B820 660 aa20.11■□□□□ 0.81
SMIM13-202ENST00000416247 SLC4A3P48751 1232 aa20.11■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms