RNA–Protein interactions for RNA: ENST00000415380.6

SCARB1-203, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2 BASIC

Gene SCARB1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-203ENST00000415380 BRD4O60885 1362 aaPredicted RBP24.26■■□□□ 1.47
SCARB1-203ENST00000415380 MYBBP1AQ9BQG0 1328 aaKnown RBP24.25■■□□□ 1.47
SCARB1-203ENST00000415380 E9PCH4 1651 aa24.24■■□□□ 1.47
SCARB1-203ENST00000415380 HNRNPMP52272 730 aaKnown RBP eCLIP24.24■■□□□ 1.475e-9■■■■□ 25.7
SCARB1-203ENST00000415380 KTN1Q86UP2 1357 aaKnown RBP24.24■■□□□ 1.47
SCARB1-203ENST00000415380 RALBP1Q15311 655 aa24.23■■□□□ 1.47
SCARB1-203ENST00000415380 ERCC6Q03468 1493 aa24.22■■□□□ 1.47
SCARB1-203ENST00000415380 ARHGEF5Q12774 1597 aa24.22■■□□□ 1.47
SCARB1-203ENST00000415380 NOP58Q9Y2X3 529 aaKnown RBP24.19■■□□□ 1.46
SCARB1-203ENST00000415380 FAM135AQ9P2D6 1515 aa24.17■■□□□ 1.46
SCARB1-203ENST00000415380 CCDC141Q6ZP82 1450 aa24.14■■□□□ 1.46
SCARB1-203ENST00000415380 TRPM1Q7Z4N2 1603 aa24.14■■□□□ 1.46
SCARB1-203ENST00000415380 PRAG1Q86YV5 1406 aa24.14■■□□□ 1.45
SCARB1-203ENST00000415380 SAMD9LQ8IVG5 1584 aa24.14■■□□□ 1.45
SCARB1-203ENST00000415380 MYT1LQ9UL68 1186 aa24.13■■□□□ 1.45
SCARB1-203ENST00000415380 PAK3O75914 559 aaPredicted RBP24.12■■□□□ 1.45
SCARB1-203ENST00000415380 RRP1P56182 461 aaKnown RBP24.12■■□□□ 1.45
SCARB1-203ENST00000415380 PARD3Q8TEW0 1356 aa24.11■■□□□ 1.45
SCARB1-203ENST00000415380 NLRP13Q86W25 1043 aa24.11■■□□□ 1.45
SCARB1-203ENST00000415380 CCDC144AA2RUR9 1427 aa24.11■■□□□ 1.45
SCARB1-203ENST00000415380 CDC42BPBQ9Y5S2 1711 aa24.09■■□□□ 1.45
SCARB1-203ENST00000415380 PREX2Q70Z35 1606 aa24.09■■□□□ 1.45
SCARB1-203ENST00000415380 ANP32AP39687 249 aaKnown RBP24.07■■□□□ 1.44
SCARB1-203ENST00000415380 NBPF1Q3BBV0 1214 aa24.07■■□□□ 1.44
SCARB1-203ENST00000415380 RCAN3Q9UKA8 241 aa24.07■■□□□ 1.44
SCARB1-203ENST00000415380 SALL2Q9Y467 1007 aaPredicted RBP24.06■■□□□ 1.44
SCARB1-203ENST00000415380 PER1O15534 1290 aaPredicted RBP24.06■■□□□ 1.44
SCARB1-203ENST00000415380 RGL3Q3MIN7 710 aa24.06■■□□□ 1.44
SCARB1-203ENST00000415380 EXOC6Q8TAG9 804 aa24.06■■□□□ 1.44
SCARB1-203ENST00000415380 RSPH4AQ5TD94 716 aa24.05■■□□□ 1.44
SCARB1-203ENST00000415380 IPO9Q96P70 1041 aaKnown RBP24.05■■□□□ 1.44
SCARB1-203ENST00000415380 PLA2R1Q13018 1463 aa24.05■■□□□ 1.44
SCARB1-203ENST00000415380 GPRASP1Q5JY77 1395 aa24.04■■□□□ 1.44
SCARB1-203ENST00000415380 A2MP01023 1474 aa24.03■■□□□ 1.44
SCARB1-203ENST00000415380 PDE3BQ13370 1112 aa24.03■■□□□ 1.44
SCARB1-203ENST00000415380 UNC13BO14795 1591 aa24.03■■□□□ 1.44
SCARB1-203ENST00000415380 COL17A1Q9UMD9 1497 aaPredicted RBP24.02■■□□□ 1.44
SCARB1-203ENST00000415380 SYCP2Q9BX26 1530 aa24.01■■□□□ 1.43
SCARB1-203ENST00000415380 DEKP35659 375 aaKnown RBP24.01■■□□□ 1.43
SCARB1-203ENST00000415380 PRDM15P57071 1507 aaPredicted RBP24■■□□□ 1.43
SCARB1-203ENST00000415380 LAMC1P11047 1609 aa24■■□□□ 1.43
SCARB1-203ENST00000415380 NBR1Q14596 966 aa24■■□□□ 1.43
SCARB1-203ENST00000415380 DISP3Q9P2K9 1392 aa23.99■■□□□ 1.43
SCARB1-203ENST00000415380 MAST1Q9Y2H9 1570 aa23.99■■□□□ 1.43
SCARB1-203ENST00000415380 GRWD1Q9BQ67 446 aaKnown RBP eCLIP23.99■■□□□ 1.43
SCARB1-203ENST00000415380 TESK2Q96S53 571 aa23.98■■□□□ 1.43
SCARB1-203ENST00000415380 WASHC2CQ9Y4E1 1318 aa23.97■■□□□ 1.43
SCARB1-203ENST00000415380 CC2D1BQ5T0F9 858 aaKnown RBP23.97■■□□□ 1.43
SCARB1-203ENST00000415380 CDCA7LQ96GN5 454 aa23.97■■□□□ 1.43
SCARB1-203ENST00000415380 ZBTB47Q9UFB7 747 aaPredicted RBP23.96■■□□□ 1.43
SCARB1-203ENST00000415380 ARHGAP5Q13017 1502 aa23.95■■□□□ 1.42
SCARB1-203ENST00000415380 TTC37Q6PGP7 1564 aa23.95■■□□□ 1.42
SCARB1-203ENST00000415380 MYO5CQ9NQX4 1742 aa23.95■■□□□ 1.42
SCARB1-203ENST00000415380 IQGAP3Q86VI3 1631 aa23.94■■□□□ 1.42
SCARB1-203ENST00000415380 ERBINQ96RT1 1412 aa23.94■■□□□ 1.42
SCARB1-203ENST00000415380 TCERG1O14776 1098 aaKnown RBP23.94■■□□□ 1.42
SCARB1-203ENST00000415380 BLMP54132 1417 aaPredicted RBP23.93■■□□□ 1.42
SCARB1-203ENST00000415380 PANK3Q9H999 370 aa23.93■■□□□ 1.42
SCARB1-203ENST00000415380 EIF2AK4Q9P2K8 1649 aaKnown RBP23.92■■□□□ 1.42
SCARB1-203ENST00000415380 INSRP06213 1382 aa23.92■■□□□ 1.42
SCARB1-203ENST00000415380 PLEKHH2Q8IVE3 1493 aa23.92■■□□□ 1.42
SCARB1-203ENST00000415380 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.91■■□□□ 1.422e-7■■■■□ 22.7
SCARB1-203ENST00000415380 PLXNC1O60486 1568 aa23.91■■□□□ 1.42
SCARB1-203ENST00000415380 ZMYM4Q5VZL5 1548 aa23.91■■□□□ 1.42
SCARB1-203ENST00000415380 TMF1P82094 1093 aa23.89■■□□□ 1.41
SCARB1-203ENST00000415380 ATP10AO60312 1499 aa23.87■■□□□ 1.41
SCARB1-203ENST00000415380 PDE4AP27815 886 aa23.86■■□□□ 1.41
SCARB1-203ENST00000415380 PLIN1O60240 522 aa23.86■■□□□ 1.41
SCARB1-203ENST00000415380 NPM2Q86SE8 214 aaKnown RBP23.85■■□□□ 1.41
SCARB1-203ENST00000415380 DUOX2Q9NRD8 1548 aa23.85■■□□□ 1.41
SCARB1-203ENST00000415380 MAGI2Q86UL8 1455 aa23.84■■□□□ 1.41
SCARB1-203ENST00000415380 MS4A1P11836 297 aa23.83■■□□□ 1.41
SCARB1-203ENST00000415380 BACH2Q9BYV9 841 aa23.83■■□□□ 1.41
SCARB1-203ENST00000415380 RNF17Q9BXT8 1623 aaKnown RBP23.83■■□□□ 1.41
SCARB1-203ENST00000415380 CRBNQ96SW2 442 aa23.81■■□□□ 1.4
SCARB1-203ENST00000415380 RTL5Q5HYW3 569 aaPredicted RBP23.78■■□□□ 1.4
SCARB1-203ENST00000415380 ADAMTS8Q9UP79 889 aa23.78■■□□□ 1.4
SCARB1-203ENST00000415380 WDR7Q9Y4E6 1490 aa23.77■■□□□ 1.4
SCARB1-203ENST00000415380 ABCC2Q92887 1545 aa23.75■■□□□ 1.39
SCARB1-203ENST00000415380 CHD1O14646 1710 aa23.74■■□□□ 1.39
SCARB1-203ENST00000415380 SHROOM2Q13796 1616 aa23.74■■□□□ 1.39
SCARB1-203ENST00000415380 MADDQ8WXG6 1647 aa23.73■■□□□ 1.39
SCARB1-203ENST00000415380 PPP2R1AP30153 589 aa23.72■■□□□ 1.39
SCARB1-203ENST00000415380 SKAP1Q86WV1 359 aa23.72■■□□□ 1.39
SCARB1-203ENST00000415380 KNSTRNQ9Y448 316 aa23.72■■□□□ 1.39
SCARB1-203ENST00000415380 IQGAP1P46940 1657 aa23.72■■□□□ 1.39
SCARB1-203ENST00000415380 C20orf194Q5TEA3 1177 aa23.71■■□□□ 1.39
SCARB1-203ENST00000415380 PLCH2O75038 1416 aa23.7■■□□□ 1.38
SCARB1-203ENST00000415380 PLEKHH1Q9ULM0 1364 aa23.7■■□□□ 1.38
SCARB1-203ENST00000415380 ERCC6L2Q5T890 1561 aa23.7■■□□□ 1.38
SCARB1-203ENST00000415380 AMER1Q5JTC6 1135 aaPredicted RBP23.69■■□□□ 1.38
SCARB1-203ENST00000415380 WDR43Q15061 677 aaKnown RBP eCLIP23.68■■□□□ 1.388e-6■■□□□ 11.7
SCARB1-203ENST00000415380 EFCAB2Q5VUJ9 269 aa23.67■■□□□ 1.38
SCARB1-203ENST00000415380 DUSP27Q5VZP5 1158 aa23.67■■□□□ 1.38
SCARB1-203ENST00000415380 SYNMO15061 1565 aa23.66■■□□□ 1.38
SCARB1-203ENST00000415380 TRAPPC8Q9Y2L5 1435 aa23.66■■□□□ 1.38
SCARB1-203ENST00000415380 ABCC1P33527 1531 aa23.66■■□□□ 1.38
SCARB1-203ENST00000415380 LAS1LQ9Y4W2 734 aaKnown RBP23.65■■□□□ 1.38
SCARB1-203ENST00000415380 KDM2BQ8NHM5 1336 aa23.65■■□□□ 1.38
SCARB1-203ENST00000415380 ZNF521Q96K83 1311 aa23.65■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms