RNA–Protein interactions for RNA: ENST00000413146.6

TNFRSF8-202, Transcript of TNF receptor superfamily member 8, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF8, Length 2,363 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF8-202ENST00000413146 ST20-MTHFSA0A0A6YYL1 179 aa25.68■■□□□ 1.7
TNFRSF8-202ENST00000413146 CCDC141Q6ZP82 1450 aa25.68■■□□□ 1.7
TNFRSF8-202ENST00000413146 RNF123Q5XPI4 1314 aa25.67■■□□□ 1.7
TNFRSF8-202ENST00000413146 KTN1Q86UP2 1357 aaKnown RBP25.67■■□□□ 1.7
TNFRSF8-202ENST00000413146 PREX2Q70Z35 1606 aa25.66■■□□□ 1.7
TNFRSF8-202ENST00000413146 SAMD9LQ8IVG5 1584 aa25.66■■□□□ 1.7
TNFRSF8-202ENST00000413146 FAM135AQ9P2D6 1515 aa25.66■■□□□ 1.7
TNFRSF8-202ENST00000413146 CDC42BPBQ9Y5S2 1711 aa25.65■■□□□ 1.7
TNFRSF8-202ENST00000413146 BRD4O60885 1362 aaPredicted RBP25.64■■□□□ 1.69
TNFRSF8-202ENST00000413146 MYBBP1AQ9BQG0 1328 aaKnown RBP25.63■■□□□ 1.69
TNFRSF8-202ENST00000413146 RALBP1Q15311 655 aa25.62■■□□□ 1.69
TNFRSF8-202ENST00000413146 LRPPRCP42704 1394 aaKnown RBP25.61■■□□□ 1.69
TNFRSF8-202ENST00000413146 TRPM1Q7Z4N2 1603 aa25.61■■□□□ 1.69
TNFRSF8-202ENST00000413146 CCDC136Q96JN2 1154 aa25.59■■□□□ 1.69
TNFRSF8-202ENST00000413146 CCDC144AA2RUR9 1427 aa25.59■■□□□ 1.69
TNFRSF8-202ENST00000413146 RSPH4AQ5TD94 716 aa25.58■■□□□ 1.69
TNFRSF8-202ENST00000413146 SHROOM2Q13796 1616 aa25.58■■□□□ 1.69
TNFRSF8-202ENST00000413146 PRAG1Q86YV5 1406 aa25.57■■□□□ 1.68
TNFRSF8-202ENST00000413146 SENP3-EIF4A1A0A087X0R7 540 aa25.56■■□□□ 1.68
TNFRSF8-202ENST00000413146 UNC13BO14795 1591 aa25.55■■□□□ 1.68
TNFRSF8-202ENST00000413146 SYCP2Q9BX26 1530 aa25.54■■□□□ 1.68
TNFRSF8-202ENST00000413146 MAST1Q9Y2H9 1570 aa25.53■■□□□ 1.68
TNFRSF8-202ENST00000413146 CLASP1Q7Z460 1538 aa25.53■■□□□ 1.68
TNFRSF8-202ENST00000413146 ARHGAP5Q13017 1502 aa25.5■■□□□ 1.67
TNFRSF8-202ENST00000413146 LAMC1P11047 1609 aa25.49■■□□□ 1.67
TNFRSF8-202ENST00000413146 TTC37Q6PGP7 1564 aa25.48■■□□□ 1.67
TNFRSF8-202ENST00000413146 NLRP13Q86W25 1043 aa25.48■■□□□ 1.67
TNFRSF8-202ENST00000413146 PARD3Q8TEW0 1356 aa25.48■■□□□ 1.67
TNFRSF8-202ENST00000413146 MYO5CQ9NQX4 1742 aa25.47■■□□□ 1.67
TNFRSF8-202ENST00000413146 A2MP01023 1474 aa25.46■■□□□ 1.67
TNFRSF8-202ENST00000413146 RGL3Q3MIN7 710 aa25.46■■□□□ 1.67
TNFRSF8-202ENST00000413146 GPRASP1Q5JY77 1395 aa25.46■■□□□ 1.67
TNFRSF8-202ENST00000413146 IQGAP3Q86VI3 1631 aa25.46■■□□□ 1.67
TNFRSF8-202ENST00000413146 PLXNC1O60486 1568 aa25.46■■□□□ 1.67
TNFRSF8-202ENST00000413146 PLA2R1Q13018 1463 aa25.45■■□□□ 1.66
TNFRSF8-202ENST00000413146 EIF2AK4Q9P2K8 1649 aaKnown RBP25.45■■□□□ 1.66
TNFRSF8-202ENST00000413146 COL17A1Q9UMD9 1497 aaPredicted RBP25.44■■□□□ 1.66
TNFRSF8-202ENST00000413146 PRDM15P57071 1507 aaPredicted RBP25.44■■□□□ 1.66
TNFRSF8-202ENST00000413146 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25.43■■□□□ 1.66
TNFRSF8-202ENST00000413146 NBPF1Q3BBV0 1214 aa25.43■■□□□ 1.66
TNFRSF8-202ENST00000413146 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.43■■□□□ 1.66
TNFRSF8-202ENST00000413146 RRP1P56182 461 aaKnown RBP25.41■■□□□ 1.66
TNFRSF8-202ENST00000413146 PLEKHH2Q8IVE3 1493 aa25.41■■□□□ 1.66
TNFRSF8-202ENST00000413146 BCL11AQ9H165 835 aa25.4■■□□□ 1.66
TNFRSF8-202ENST00000413146 NOP58Q9Y2X3 529 aaKnown RBP25.4■■□□□ 1.66
TNFRSF8-202ENST00000413146 PDE3BQ13370 1112 aa25.39■■□□□ 1.65
TNFRSF8-202ENST00000413146 PER1O15534 1290 aaPredicted RBP25.38■■□□□ 1.65
TNFRSF8-202ENST00000413146 RCAN3Q9UKA8 241 aa25.38■■□□□ 1.65
TNFRSF8-202ENST00000413146 DUOX2Q9NRD8 1548 aa25.37■■□□□ 1.65
TNFRSF8-202ENST00000413146 MYT1LQ9UL68 1186 aa25.37■■□□□ 1.65
TNFRSF8-202ENST00000413146 WASHC2CQ9Y4E1 1318 aa25.37■■□□□ 1.65
TNFRSF8-202ENST00000413146 DISP3Q9P2K9 1392 aa25.36■■□□□ 1.65
TNFRSF8-202ENST00000413146 ERCC6L2Q5T890 1561 aa25.35■■□□□ 1.65
TNFRSF8-202ENST00000413146 ANP32AP39687 249 aaKnown RBP25.35■■□□□ 1.65
TNFRSF8-202ENST00000413146 SALL2Q9Y467 1007 aaPredicted RBP25.35■■□□□ 1.65
TNFRSF8-202ENST00000413146 ERBINQ96RT1 1412 aa25.35■■□□□ 1.65
TNFRSF8-202ENST00000413146 TESK2Q96S53 571 aa25.34■■□□□ 1.65
TNFRSF8-202ENST00000413146 ATP10AO60312 1499 aa25.33■■□□□ 1.65
TNFRSF8-202ENST00000413146 MAGI2Q86UL8 1455 aa25.33■■□□□ 1.65
TNFRSF8-202ENST00000413146 ABCC2Q92887 1545 aa25.32■■□□□ 1.64
TNFRSF8-202ENST00000413146 CC2D1BQ5T0F9 858 aaKnown RBP25.31■■□□□ 1.64
TNFRSF8-202ENST00000413146 ZMYM4Q5VZL5 1548 aa25.31■■□□□ 1.64
TNFRSF8-202ENST00000413146 TMF1P82094 1093 aa25.31■■□□□ 1.64
TNFRSF8-202ENST00000413146 EXOC6Q8TAG9 804 aa25.31■■□□□ 1.64
TNFRSF8-202ENST00000413146 RNF17Q9BXT8 1623 aaKnown RBP25.3■■□□□ 1.64
TNFRSF8-202ENST00000413146 INSRP06213 1382 aa25.3■■□□□ 1.64
TNFRSF8-202ENST00000413146 PANK3Q9H999 370 aa25.29■■□□□ 1.64
TNFRSF8-202ENST00000413146 BLMP54132 1417 aaPredicted RBP25.28■■□□□ 1.64
TNFRSF8-202ENST00000413146 IPO9Q96P70 1041 aaKnown RBP25.27■■□□□ 1.64
TNFRSF8-202ENST00000413146 PAK3O75914 559 aaPredicted RBP25.25■■□□□ 1.63
TNFRSF8-202ENST00000413146 CDCA7LQ96GN5 454 aa25.23■■□□□ 1.63
TNFRSF8-202ENST00000413146 PLCH2O75038 1416 aa25.21■■□□□ 1.63
TNFRSF8-202ENST00000413146 TCERG1O14776 1098 aaKnown RBP25.2■■□□□ 1.63
TNFRSF8-202ENST00000413146 ABCC1P33527 1531 aa25.2■■□□□ 1.62
TNFRSF8-202ENST00000413146 OSCARQ8IYS5 282 aa25.19■■□□□ 1.62
TNFRSF8-202ENST00000413146 MADDQ8WXG6 1647 aa25.19■■□□□ 1.62
TNFRSF8-202ENST00000413146 ZBTB47Q9UFB7 747 aaPredicted RBP25.18■■□□□ 1.62
TNFRSF8-202ENST00000413146 IQGAP1P46940 1657 aa25.18■■□□□ 1.62
TNFRSF8-202ENST00000413146 EFCAB2Q5VUJ9 269 aa25.18■■□□□ 1.62
TNFRSF8-202ENST00000413146 ZCCHC11Q5TAX3 1644 aaKnown RBP25.17■■□□□ 1.62
TNFRSF8-202ENST00000413146 NBR1Q14596 966 aa25.16■■□□□ 1.62
TNFRSF8-202ENST00000413146 SPHKAPQ2M3C7 1700 aa25.14■■□□□ 1.62
TNFRSF8-202ENST00000413146 WDR7Q9Y4E6 1490 aa25.14■■□□□ 1.61
TNFRSF8-202ENST00000413146 CEP152O94986 1710 aa25.13■■□□□ 1.61
TNFRSF8-202ENST00000413146 TRAPPC8Q9Y2L5 1435 aa25.13■■□□□ 1.61
TNFRSF8-202ENST00000413146 TRPM2O94759 1503 aa25.13■■□□□ 1.61
TNFRSF8-202ENST00000413146 UHRF1BP1LA0JNW5 1464 aa25.12■■□□□ 1.61
TNFRSF8-202ENST00000413146 DEKP35659 375 aaKnown RBP25.12■■□□□ 1.61
TNFRSF8-202ENST00000413146 KNSTRNQ9Y448 316 aa25.11■■□□□ 1.61
TNFRSF8-202ENST00000413146 SYNMO15061 1565 aa25.11■■□□□ 1.61
TNFRSF8-202ENST00000413146 MS4A1P11836 297 aa25.1■■□□□ 1.61
TNFRSF8-202ENST00000413146 PLIN1O60240 522 aa25.1■■□□□ 1.61
TNFRSF8-202ENST00000413146 PDE4AP27815 886 aa25.08■■□□□ 1.61
TNFRSF8-202ENST00000413146 CDCA8Q53HL2 280 aa25.08■■□□□ 1.61
TNFRSF8-202ENST00000413146 ADAMTS8Q9UP79 889 aa25.08■■□□□ 1.61
TNFRSF8-202ENST00000413146 SCAF11Q99590 1463 aaKnown RBP25.07■■□□□ 1.6
TNFRSF8-202ENST00000413146 SPAG9O60271 1321 aaKnown RBP25.07■■□□□ 1.6
TNFRSF8-202ENST00000413146 WDR43Q15061 677 aaKnown RBP eCLIP25.07■■□□□ 1.6
TNFRSF8-202ENST00000413146 NPM2Q86SE8 214 aaKnown RBP25.07■■□□□ 1.6
TNFRSF8-202ENST00000413146 CRBNQ96SW2 442 aa25.07■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms