RNA–Protein interactions for RNA: ENST00000412710.1

CUBNP1-201, Transcript of cubilin pseudogene 1, humanhuman

BASIC

Gene CUBNP1, Length 1,790 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP1-201ENST00000412710 ARID3CA6NKF2 412 aa12.2□□□□□ -0.46
CUBNP1-201ENST00000412710 IRX6P78412 446 aaPredicted RBP12.2□□□□□ -0.46
CUBNP1-201ENST00000412710 JPH4Q96JJ6 628 aa12.2□□□□□ -0.46
CUBNP1-201ENST00000412710 RTN4Q9NQC3 1192 aaKnown RBP12.2□□□□□ -0.46
CUBNP1-201ENST00000412710 PREX2Q70Z35 1606 aa12.2□□□□□ -0.46
CUBNP1-201ENST00000412710 NUP155O75694 1391 aa12.2□□□□□ -0.46
CUBNP1-201ENST00000412710 UNC13BO14795 1591 aa12.19□□□□□ -0.46
CUBNP1-201ENST00000412710 CHMP7Q8WUX9 453 aaPredicted RBP12.19□□□□□ -0.46
CUBNP1-201ENST00000412710 GPRASP1Q5JY77 1395 aa12.19□□□□□ -0.46
CUBNP1-201ENST00000412710 CCDC141Q6ZP82 1450 aa12.19□□□□□ -0.46
CUBNP1-201ENST00000412710 TRPM1Q7Z4N2 1603 aa12.18□□□□□ -0.46
CUBNP1-201ENST00000412710 MYBBP1AQ9BQG0 1328 aaKnown RBP12.17□□□□□ -0.46
CUBNP1-201ENST00000412710 WASHC2CQ9Y4E1 1318 aa12.17□□□□□ -0.46
CUBNP1-201ENST00000412710 FAM135AQ9P2D6 1515 aa12.17□□□□□ -0.46
CUBNP1-201ENST00000412710 TSPY4P0CV99 314 aa12.16□□□□□ -0.46
CUBNP1-201ENST00000412710 TSPY10P0CW01 314 aa12.16□□□□□ -0.46
CUBNP1-201ENST00000412710 PLXNC1O60486 1568 aa12.16□□□□□ -0.46
CUBNP1-201ENST00000412710 ATP10AO60312 1499 aa12.16□□□□□ -0.46
CUBNP1-201ENST00000412710 SAMD9LQ8IVG5 1584 aa12.15□□□□□ -0.46
CUBNP1-201ENST00000412710 EIF2AK4Q9P2K8 1649 aaKnown RBP12.15□□□□□ -0.46
CUBNP1-201ENST00000412710 PRAG1Q86YV5 1406 aa12.15□□□□□ -0.46
CUBNP1-201ENST00000412710 CARD11Q9BXL7 1154 aa12.15□□□□□ -0.46
CUBNP1-201ENST00000412710 PARD3Q8TEW0 1356 aa12.14□□□□□ -0.47
CUBNP1-201ENST00000412710 CDC42BPBQ9Y5S2 1711 aa12.14□□□□□ -0.47
CUBNP1-201ENST00000412710 PDE3BQ13370 1112 aa12.14□□□□□ -0.47
CUBNP1-201ENST00000412710 B4GALNT3Q6L9W6 998 aa12.14□□□□□ -0.47
CUBNP1-201ENST00000412710 IQGAP3Q86VI3 1631 aa12.13□□□□□ -0.47
CUBNP1-201ENST00000412710 ERCC6Q03468 1493 aa12.13□□□□□ -0.47
CUBNP1-201ENST00000412710 PLEKHH2Q8IVE3 1493 aa12.13□□□□□ -0.47
CUBNP1-201ENST00000412710 TMC1Q8TDI8 760 aa12.13□□□□□ -0.47
CUBNP1-201ENST00000412710 PRDM15P57071 1507 aaPredicted RBP12.13□□□□□ -0.47
CUBNP1-201ENST00000412710 MAGI2Q86UL8 1455 aa12.13□□□□□ -0.47
CUBNP1-201ENST00000412710 ERICH6Q7L0X2 663 aa12.13□□□□□ -0.47
CUBNP1-201ENST00000412710 ZNF777Q9ULD5 760 aaPredicted RBP12.13□□□□□ -0.47
CUBNP1-201ENST00000412710 COL17A1Q9UMD9 1497 aaPredicted RBP12.11□□□□□ -0.47
CUBNP1-201ENST00000412710 NLRP13Q86W25 1043 aa12.1□□□□□ -0.47
CUBNP1-201ENST00000412710 ST20-MTHFSA0A0A6YYL1 179 aa12.1□□□□□ -0.47
CUBNP1-201ENST00000412710 CCDC144AA2RUR9 1427 aa12.1□□□□□ -0.47
CUBNP1-201ENST00000412710 SHROOM2Q13796 1616 aa12.09□□□□□ -0.47
CUBNP1-201ENST00000412710 RNF17Q9BXT8 1623 aaKnown RBP12.08□□□□□ -0.48
CUBNP1-201ENST00000412710 PLA2R1Q13018 1463 aa12.08□□□□□ -0.48
CUBNP1-201ENST00000412710 NPM3O75607 178 aaKnown RBP12.08□□□□□ -0.48
CUBNP1-201ENST00000412710 CCDC136Q96JN2 1154 aa12.08□□□□□ -0.48
CUBNP1-201ENST00000412710 DUOX2Q9NRD8 1548 aa12.08□□□□□ -0.48
CUBNP1-201ENST00000412710 BLMP54132 1417 aaPredicted RBP12.08□□□□□ -0.48
CUBNP1-201ENST00000412710 BCL11AQ9H165 835 aa12.07□□□□□ -0.48
CUBNP1-201ENST00000412710 A2MP01023 1474 aa12.07□□□□□ -0.48
CUBNP1-201ENST00000412710 ERBINQ96RT1 1412 aa12.07□□□□□ -0.48
CUBNP1-201ENST00000412710 ZNF326Q5BKZ1 582 aaKnown RBP12.07□□□□□ -0.48
CUBNP1-201ENST00000412710 PER1O15534 1290 aaPredicted RBP12.06□□□□□ -0.48
CUBNP1-201ENST00000412710 DCAF11Q8TEB1 546 aa12.06□□□□□ -0.48
CUBNP1-201ENST00000412710 NOP58Q9Y2X3 529 aaKnown RBP12.06□□□□□ -0.48
CUBNP1-201ENST00000412710 SYCP2Q9BX26 1530 aa12.05□□□□□ -0.48
CUBNP1-201ENST00000412710 MYO5CQ9NQX4 1742 aa12.05□□□□□ -0.48
CUBNP1-201ENST00000412710 RRP1P56182 461 aaKnown RBP12.05□□□□□ -0.48
CUBNP1-201ENST00000412710 STAC3Q96MF2 364 aa12.05□□□□□ -0.48
CUBNP1-201ENST00000412710 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.04□□□□□ -0.48
CUBNP1-201ENST00000412710 HNRNPMP52272 730 aaKnown RBP eCLIP12.04□□□□□ -0.48
CUBNP1-201ENST00000412710 TCERG1O14776 1098 aaKnown RBP12.03□□□□□ -0.48
CUBNP1-201ENST00000412710 MS4A1P11836 297 aa12.03□□□□□ -0.48
CUBNP1-201ENST00000412710 TTC37Q6PGP7 1564 aa12.03□□□□□ -0.48
CUBNP1-201ENST00000412710 NEURL4Q96JN8 1562 aa12.03□□□□□ -0.48
CUBNP1-201ENST00000412710 IPO9Q96P70 1041 aaKnown RBP12.02□□□□□ -0.48
CUBNP1-201ENST00000412710 TESK2Q96S53 571 aa12.02□□□□□ -0.48
CUBNP1-201ENST00000412710 ANP32AP39687 249 aaKnown RBP12.02□□□□□ -0.49
CUBNP1-201ENST00000412710 RCAN3Q9UKA8 241 aa12.02□□□□□ -0.49
CUBNP1-201ENST00000412710 ABCC2Q92887 1545 aa12.02□□□□□ -0.49
CUBNP1-201ENST00000412710 ARHGAP5Q13017 1502 aa12.01□□□□□ -0.49
CUBNP1-201ENST00000412710 ARAP3Q8WWN8 1544 aa12.01□□□□□ -0.49
CUBNP1-201ENST00000412710 POLR3GLQ9BT43 218 aa12□□□□□ -0.49
CUBNP1-201ENST00000412710 IQGAP1P46940 1657 aa12□□□□□ -0.49
CUBNP1-201ENST00000412710 FBLN2P98095 1184 aa12□□□□□ -0.49
CUBNP1-201ENST00000412710 AMER1Q5JTC6 1135 aaPredicted RBP12□□□□□ -0.49
CUBNP1-201ENST00000412710 KDM2AQ9Y2K7 1162 aa12□□□□□ -0.49
CUBNP1-201ENST00000412710 CLASP1Q7Z460 1538 aa11.99□□□□□ -0.49
CUBNP1-201ENST00000412710 SCAPERQ9BY12 1400 aa11.99□□□□□ -0.49
CUBNP1-201ENST00000412710 UHRF1BP1LA0JNW5 1464 aa11.98□□□□□ -0.49
CUBNP1-201ENST00000412710 NPC1L1Q9UHC9 1359 aa11.98□□□□□ -0.49
CUBNP1-201ENST00000412710 MADDQ8WXG6 1647 aa11.98□□□□□ -0.49
CUBNP1-201ENST00000412710 RTEL1-TNFRSF6BF6WH68 1400 aa11.97□□□□□ -0.49
CUBNP1-201ENST00000412710 PLCH2O75038 1416 aa11.97□□□□□ -0.49
CUBNP1-201ENST00000412710 SYNMO15061 1565 aa11.97□□□□□ -0.49
CUBNP1-201ENST00000412710 KIAA1210Q9ULL0 1709 aa11.97□□□□□ -0.49
CUBNP1-201ENST00000412710 DISP3Q9P2K9 1392 aa11.97□□□□□ -0.49
CUBNP1-201ENST00000412710 TMF1P82094 1093 aa11.97□□□□□ -0.49
CUBNP1-201ENST00000412710 TRPM2O94759 1503 aa11.96□□□□□ -0.49
CUBNP1-201ENST00000412710 ABCC1P33527 1531 aa11.96□□□□□ -0.49
CUBNP1-201ENST00000412710 SPHKAPQ2M3C7 1700 aa11.96□□□□□ -0.49
CUBNP1-201ENST00000412710 PTPRTO14522 1441 aa11.95□□□□□ -0.5
CUBNP1-201ENST00000412710 DEPDC5O75140 1603 aa11.95□□□□□ -0.5
CUBNP1-201ENST00000412710 WDR7Q9Y4E6 1490 aa11.95□□□□□ -0.5
CUBNP1-201ENST00000412710 CHD1O14646 1710 aa11.95□□□□□ -0.5
CUBNP1-201ENST00000412710 CEP152O94986 1710 aa11.95□□□□□ -0.5
CUBNP1-201ENST00000412710 NBPF1Q3BBV0 1214 aa11.95□□□□□ -0.5
CUBNP1-201ENST00000412710 ZBTB47Q9UFB7 747 aaPredicted RBP11.94□□□□□ -0.5
CUBNP1-201ENST00000412710 PIK3C2GO75747 1445 aa11.93□□□□□ -0.5
CUBNP1-201ENST00000412710 CDCA8Q53HL2 280 aa11.93□□□□□ -0.5
CUBNP1-201ENST00000412710 EXOC6Q8TAG9 804 aa11.93□□□□□ -0.5
CUBNP1-201ENST00000412710 CNKSR2Q8WXI2 1034 aa11.93□□□□□ -0.5
CUBNP1-201ENST00000412710 VWDEQ8N2E2 1590 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms