RNA–Protein interactions for RNA: ENST00000410504.1

RN7SKP278-201, Transcript of RNA, 7SK small nuclear pseudogene 278, humanhuman

BASIC

Gene RN7SKP278, Length 342 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP278-201ENST00000410504 SPDYE16A6NNV3 312 aaPredicted RBP11.29□□□□□ -0.6
RN7SKP278-201ENST00000410504 ANO8Q9HCE9 1232 aaPredicted RBP11.29□□□□□ -0.6
RN7SKP278-201ENST00000410504 MARVELD3Q96A59 401 aa11.28□□□□□ -0.6
RN7SKP278-201ENST00000410504 EIF4G3O43432 1585 aaKnown RBP11.28□□□□□ -0.6
RN7SKP278-201ENST00000410504 RSF1Q96T23 1441 aaPredicted RBP11.26□□□□□ -0.61
RN7SKP278-201ENST00000410504 LHX6Q9UPM6 363 aa11.25□□□□□ -0.61
RN7SKP278-201ENST00000410504 PSDA5PKW4 1024 aaPredicted RBP11.24□□□□□ -0.61
RN7SKP278-201ENST00000410504 ERBB3P21860 1342 aa11.23□□□□□ -0.61
RN7SKP278-201ENST00000410504 IFT140Q96RY7 1462 aa11.23□□□□□ -0.61
RN7SKP278-201ENST00000410504 WIZO95785 1651 aa11.23□□□□□ -0.61
RN7SKP278-201ENST00000410504 FAM205CA6NFA0 338 aa11.22□□□□□ -0.61
RN7SKP278-201ENST00000410504 CFTRP13569 1480 aa11.22□□□□□ -0.61
RN7SKP278-201ENST00000410504 PTGER2P43116 358 aa11.22□□□□□ -0.61
RN7SKP278-201ENST00000410504 AQRO60306 1485 aaKnown RBP eCLIP11.21□□□□□ -0.61
RN7SKP278-201ENST00000410504 POTEGQ6S5H5 508 aa11.21□□□□□ -0.61
RN7SKP278-201ENST00000410504 JPH4Q96JJ6 628 aa11.21□□□□□ -0.61
RN7SKP278-201ENST00000410504 POTEMA6NI47 508 aa11.2□□□□□ -0.62
RN7SKP278-201ENST00000410504 HS3ST6Q96QI5 342 aa11.2□□□□□ -0.62
RN7SKP278-201ENST00000410504 FOSBP53539 338 aa11.19□□□□□ -0.62
RN7SKP278-201ENST00000410504 VARS2Q5ST30 1063 aaKnown RBP11.19□□□□□ -0.62
RN7SKP278-201ENST00000410504 PHF14O94880 888 aa11.17□□□□□ -0.62
RN7SKP278-201ENST00000410504 CLASP1Q7Z460 1538 aa11.17□□□□□ -0.62
RN7SKP278-201ENST00000410504 POTEB3A0JP26 581 aa11.16□□□□□ -0.62
RN7SKP278-201ENST00000410504 PPP4R3BQ5MIZ7 849 aa11.16□□□□□ -0.62
RN7SKP278-201ENST00000410504 POTEBQ6S5H4 581 aa11.16□□□□□ -0.62
RN7SKP278-201ENST00000410504 ZNF454Q8N9F8 522 aa11.16□□□□□ -0.62
RN7SKP278-201ENST00000410504 EPAS1Q99814 870 aa11.14□□□□□ -0.63
RN7SKP278-201ENST00000410504 PCDHGA10Q9Y5H3 936 aa11.14□□□□□ -0.63
RN7SKP278-201ENST00000410504 ZNF687Q8N1G0 1237 aa11.13□□□□□ -0.63
RN7SKP278-201ENST00000410504 DDX12PQ92771 950 aa11.13□□□□□ -0.63
RN7SKP278-201ENST00000410504 TOPBP1Q92547 1522 aa11.13□□□□□ -0.63
RN7SKP278-201ENST00000410504 SEMA3EO15041 775 aa11.12□□□□□ -0.63
RN7SKP278-201ENST00000410504 TYW1BQ6NUM6 668 aa11.12□□□□□ -0.63
RN7SKP278-201ENST00000410504 FBXW7Q969H0 707 aa11.12□□□□□ -0.63
RN7SKP278-201ENST00000410504 ZDHHC16Q969W1 377 aa11.12□□□□□ -0.63
RN7SKP278-201ENST00000410504 TESPA1A2RU30 521 aaPredicted RBP11.11□□□□□ -0.63
RN7SKP278-201ENST00000410504 KIF13AQ9H1H9 1805 aa11.11□□□□□ -0.63
RN7SKP278-201ENST00000410504 TARBP1Q13395 1621 aaKnown RBP11.1□□□□□ -0.63
RN7SKP278-201ENST00000410504 GRXCR2A6NFK2 248 aa11.1□□□□□ -0.63
RN7SKP278-201ENST00000410504 MLLT3P42568 568 aaPredicted RBP11.1□□□□□ -0.63
RN7SKP278-201ENST00000410504 NBR1Q14596 966 aa11.1□□□□□ -0.63
RN7SKP278-201ENST00000410504 GAPVD1Q14C86 1478 aa11.1□□□□□ -0.63
RN7SKP278-201ENST00000410504 PBX2P40425 430 aa11.08□□□□□ -0.64
RN7SKP278-201ENST00000410504 BCL2L12Q9HB09 334 aa11.08□□□□□ -0.64
RN7SKP278-201ENST00000410504 PRDM2Q13029 1718 aa11.07□□□□□ -0.64
RN7SKP278-201ENST00000410504 ADAM33Q9BZ11 813 aa11.07□□□□□ -0.64
RN7SKP278-201ENST00000410504 ERCC6L2Q5T890 1561 aa11.07□□□□□ -0.64
RN7SKP278-201ENST00000410504 OSBPP22059 807 aa11.06□□□□□ -0.64
RN7SKP278-201ENST00000410504 EN1Q05925 392 aaPredicted RBP11.06□□□□□ -0.64
RN7SKP278-201ENST00000410504 SMYD5Q6GMV2 418 aa11.06□□□□□ -0.64
RN7SKP278-201ENST00000410504 CDAN1Q8IWY9 1227 aa11.05□□□□□ -0.64
RN7SKP278-201ENST00000410504 PCDH10Q9P2E7 1040 aa11.05□□□□□ -0.64
RN7SKP278-201ENST00000410504 SNAPC4Q5SXM2 1469 aa11.04□□□□□ -0.64
RN7SKP278-201ENST00000410504 ARHGAP33O14559 1287 aa11.03□□□□□ -0.64
RN7SKP278-201ENST00000410504 PTPREP23469 700 aa11.03□□□□□ -0.64
RN7SKP278-201ENST00000410504 POTEEQ6S8J3 1075 aa11.03□□□□□ -0.64
RN7SKP278-201ENST00000410504 PLSCR2Q9NRY7 297 aa11.03□□□□□ -0.64
RN7SKP278-201ENST00000410504 SYNJ1O43426 1573 aa11.03□□□□□ -0.64
RN7SKP278-201ENST00000410504 KCNH8Q96L42 1107 aa11.02□□□□□ -0.65
RN7SKP278-201ENST00000410504 TDRD9Q8NDG6 1382 aaKnown RBP11.02□□□□□ -0.65
RN7SKP278-201ENST00000410504 RAD54L2Q9Y4B4 1467 aa11.01□□□□□ -0.65
RN7SKP278-201ENST00000410504 MAP3K7O43318 606 aa11.01□□□□□ -0.65
RN7SKP278-201ENST00000410504 PRIM1P49642 420 aaKnown RBP11.01□□□□□ -0.65
RN7SKP278-201ENST00000410504 RBM33Q96EV2 1170 aaKnown RBP11.01□□□□□ -0.65
RN7SKP278-201ENST00000410504 HECW2Q9P2P5 1572 aa11.01□□□□□ -0.65
RN7SKP278-201ENST00000410504 TULP1O00294 542 aaPredicted RBP11□□□□□ -0.65
RN7SKP278-201ENST00000410504 C6orf132Q5T0Z8 1188 aa11□□□□□ -0.65
RN7SKP278-201ENST00000410504 KRTAP3-3Q9BYR6 98 aa11□□□□□ -0.65
RN7SKP278-201ENST00000410504 KRTAP3-2Q9BYR7 98 aa11□□□□□ -0.65
RN7SKP278-201ENST00000410504 BCANQ96GW7 911 aa10.99□□□□□ -0.65
RN7SKP278-201ENST00000410504 KCNK17Q96T54 332 aa10.99□□□□□ -0.65
RN7SKP278-201ENST00000410504 DNMBPQ6XZF7 1577 aa10.99□□□□□ -0.65
RN7SKP278-201ENST00000410504 PPP1R3GB7ZBB8 358 aa10.98□□□□□ -0.65
RN7SKP278-201ENST00000410504 PSEN2P49810 448 aa10.98□□□□□ -0.65
RN7SKP278-201ENST00000410504 CHMP7Q8WUX9 453 aaPredicted RBP10.98□□□□□ -0.65
RN7SKP278-201ENST00000410504 AXIN2Q9Y2T1 843 aa10.98□□□□□ -0.65
RN7SKP278-201ENST00000410504 TSR1Q2NL82 804 aaKnown RBP10.97□□□□□ -0.65
RN7SKP278-201ENST00000410504 POLA1P09884 1462 aaPredicted RBP10.97□□□□□ -0.65
RN7SKP278-201ENST00000410504 LSM11P83369 360 aaKnown RBP eCLIP10.95□□□□□ -0.66
RN7SKP278-201ENST00000410504 CERKQ8TCT0 537 aa10.94□□□□□ -0.66
RN7SKP278-201ENST00000410504 FBXO41Q8TF61 875 aa10.94□□□□□ -0.66
RN7SKP278-201ENST00000410504 CDHR5Q9HBB8 845 aa10.94□□□□□ -0.66
RN7SKP278-201ENST00000410504 COL9A1P20849 921 aa10.93□□□□□ -0.66
RN7SKP278-201ENST00000410504 RBM26Q5T8P6 1007 aaKnown RBP10.93□□□□□ -0.66
RN7SKP278-201ENST00000410504 DMRTA1Q5VZB9 504 aa10.93□□□□□ -0.66
RN7SKP278-201ENST00000410504 SLC4A5Q9BY07 1137 aa10.93□□□□□ -0.66
RN7SKP278-201ENST00000410504 KDM6BO15054 1643 aa10.93□□□□□ -0.66
RN7SKP278-201ENST00000410504 TK2O00142 265 aa10.92□□□□□ -0.66
RN7SKP278-201ENST00000410504 ILDR2Q71H61 639 aa10.92□□□□□ -0.66
RN7SKP278-201ENST00000410504 ZBED2Q9BTP6 218 aa10.92□□□□□ -0.66
RN7SKP278-201ENST00000410504 TOP2AP11388 1531 aaKnown RBP10.92□□□□□ -0.66
RN7SKP278-201ENST00000410504 LMTK3Q96Q04 1460 aa10.92□□□□□ -0.66
RN7SKP278-201ENST00000410504 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.91□□□□□ -0.66
RN7SKP278-201ENST00000410504 ABCC8Q09428 1581 aa10.9□□□□□ -0.66
RN7SKP278-201ENST00000410504 ADGRL1O94910 1474 aa10.9□□□□□ -0.66
RN7SKP278-201ENST00000410504 FAM69CQ0P6D2 419 aa10.9□□□□□ -0.66
RN7SKP278-201ENST00000410504 SYNJ2O15056 1496 aa10.89□□□□□ -0.67
RN7SKP278-201ENST00000410504 NUTM2FA1L443 756 aa10.89□□□□□ -0.67
RN7SKP278-201ENST00000410504 NPDC1Q9NQX5 325 aaPredicted RBP10.89□□□□□ -0.67
RN7SKP278-201ENST00000410504 TSPOAP1O95153 1857 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms