RNA–Protein interactions for RNA: ENST00000406386.7

TRIOBP-204, Transcript of TRIO and F-actin binding protein, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TRIOBP, Length 10,129 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIOBP-204ENST00000406386 HOMER1Q86YM7 354 aa13.94□□□□□ -0.18
TRIOBP-204ENST00000406386 CCDC66A2RUB6 948 aa13.94□□□□□ -0.18
TRIOBP-204ENST00000406386 FAM13BQ9NYF5 915 aa13.94□□□□□ -0.18
TRIOBP-204ENST00000406386 CHMP3Q9Y3E7 222 aa13.94□□□□□ -0.18
TRIOBP-204ENST00000406386 H0YHG0 523 aa13.94□□□□□ -0.18
TRIOBP-204ENST00000406386 RALBP1Q15311 655 aa13.93□□□□□ -0.18
TRIOBP-204ENST00000406386 AKAP17AQ02040 695 aaKnown RBP13.93□□□□□ -0.18
TRIOBP-204ENST00000406386 NOL8Q76FK4 1167 aaKnown RBP13.93□□□□□ -0.18
TRIOBP-204ENST00000406386 MYO6Q9UM54 1294 aa13.93□□□□□ -0.18
TRIOBP-204ENST00000406386 TNIKQ9UKE5 1360 aa13.93□□□□□ -0.18
TRIOBP-204ENST00000406386 FHAD1B1AJZ9 1412 aa13.92□□□□□ -0.18
TRIOBP-204ENST00000406386 KRI1Q8N9T8 703 aaKnown RBP13.92□□□□□ -0.18
TRIOBP-204ENST00000406386 GSE1Q14687 1217 aa13.92□□□□□ -0.18
TRIOBP-204ENST00000406386 KCNH8Q96L42 1107 aa13.92□□□□□ -0.18
TRIOBP-204ENST00000406386 DDX49Q9Y6V7 483 aaKnown RBP13.91□□□□□ -0.18
TRIOBP-204ENST00000406386 HDGFP51858 240 aaKnown RBP13.91□□□□□ -0.18
TRIOBP-204ENST00000406386 BAZ1BQ9UIG0 1483 aaKnown RBP13.91□□□□□ -0.18
TRIOBP-204ENST00000406386 HDGFL2Q7Z4V5 671 aaPredicted RBP13.91□□□□□ -0.18
TRIOBP-204ENST00000406386 TIMELESSQ9UNS1 1208 aa13.9□□□□□ -0.18
TRIOBP-204ENST00000406386 FOXD4L1Q9NU39 408 aa13.9□□□□□ -0.18
TRIOBP-204ENST00000406386 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.9□□□□□ -0.18
TRIOBP-204ENST00000406386 PCMTD1Q96MG8 357 aaPredicted RBP13.9□□□□□ -0.18
TRIOBP-204ENST00000406386 SMC4Q9NTJ3 1288 aa13.89□□□□□ -0.19
TRIOBP-204ENST00000406386 ZRSR2Q15696 482 aaKnown RBP13.89□□□□□ -0.19
TRIOBP-204ENST00000406386 LRRFIP1Q32MZ4 808 aaKnown RBP13.89□□□□□ -0.19
TRIOBP-204ENST00000406386 FOXD4L5Q5VV16 416 aaPredicted RBP13.89□□□□□ -0.19
TRIOBP-204ENST00000406386 FOXD4L4Q8WXT5 416 aaPredicted RBP13.89□□□□□ -0.19
TRIOBP-204ENST00000406386 FAM184AQ8NB25 1140 aa13.89□□□□□ -0.19
TRIOBP-204ENST00000406386 TOMM22Q9NS69 142 aa13.89□□□□□ -0.19
TRIOBP-204ENST00000406386 CCNB3Q8WWL7 1395 aa13.89□□□□□ -0.19
TRIOBP-204ENST00000406386 MNS1Q8NEH6 495 aa13.89□□□□□ -0.19
TRIOBP-204ENST00000406386 CCDC47Q96A33 483 aaKnown RBP13.89□□□□□ -0.19
TRIOBP-204ENST00000406386 WRNQ14191 1432 aaPredicted RBP eCLIP13.88□□□□□ -0.19
TRIOBP-204ENST00000406386 ROCK2O75116 1388 aaKnown RBP13.88□□□□□ -0.19
TRIOBP-204ENST00000406386 PKNOX2Q96KN3 472 aa13.88□□□□□ -0.19
TRIOBP-204ENST00000406386 LMOD3Q0VAK6 560 aa13.87□□□□□ -0.19
TRIOBP-204ENST00000406386 MCTP1Q6DN14 999 aa13.87□□□□□ -0.19
TRIOBP-204ENST00000406386 CCDC173Q0VFZ6 552 aa13.87□□□□□ -0.19
TRIOBP-204ENST00000406386 ARHGAP35Q9NRY4 1499 aa13.87□□□□□ -0.19
TRIOBP-204ENST00000406386 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.87□□□□□ -0.192e-6■■■■■ 96.1
TRIOBP-204ENST00000406386 CENPJQ9HC77 1338 aaPredicted RBP13.87□□□□□ -0.19
TRIOBP-204ENST00000406386 U2AF1L5P0DN76 240 aaPredicted RBP13.87□□□□□ -0.19
TRIOBP-204ENST00000406386 U2AF1Q01081 240 aaKnown RBP eCLIP13.87□□□□□ -0.19
TRIOBP-204ENST00000406386 ANO8Q9HCE9 1232 aaPredicted RBP13.87□□□□□ -0.19
TRIOBP-204ENST00000406386 FAM43AQ8N2R8 423 aa13.87□□□□□ -0.19
TRIOBP-204ENST00000406386 ZNF330Q9Y3S2 320 aaPredicted RBP13.86□□□□□ -0.19
TRIOBP-204ENST00000406386 CT47A1Q5JQC4 288 aaPredicted RBP13.86□□□□□ -0.19
TRIOBP-204ENST00000406386 ERCC4Q92889 916 aaPredicted RBP13.86□□□□□ -0.19
TRIOBP-204ENST00000406386 INCENPQ9NQS7 918 aa13.86□□□□□ -0.19
TRIOBP-204ENST00000406386 SOX12O15370 315 aa13.85□□□□□ -0.19
TRIOBP-204ENST00000406386 CNKSR2Q8WXI2 1034 aa13.85□□□□□ -0.19
TRIOBP-204ENST00000406386 STK11IPQ8N1F8 1099 aa13.85□□□□□ -0.19
TRIOBP-204ENST00000406386 G3V3G9 751 aa13.85□□□□□ -0.19
TRIOBP-204ENST00000406386 DCAF8Q5TAQ9 597 aa13.85□□□□□ -0.19
TRIOBP-204ENST00000406386 DIAPH3Q9NSV4 1193 aa13.85□□□□□ -0.19
TRIOBP-204ENST00000406386 REC8O95072 547 aa13.85□□□□□ -0.19
TRIOBP-204ENST00000406386 ODF2Q5BJF6 829 aa13.85□□□□□ -0.19
TRIOBP-204ENST00000406386 DCAF11Q8TEB1 546 aa13.85□□□□□ -0.19
TRIOBP-204ENST00000406386 IFT57Q9NWB7 429 aa13.84□□□□□ -0.19
TRIOBP-204ENST00000406386 NAP1L1P55209 391 aaKnown RBP13.84□□□□□ -0.19
TRIOBP-204ENST00000406386 TSHZ2Q9NRE2 1034 aa13.84□□□□□ -0.19
TRIOBP-204ENST00000406386 TRIM29Q14134 588 aa13.84□□□□□ -0.19
TRIOBP-204ENST00000406386 NAT10Q9H0A0 1025 aaKnown RBP13.84□□□□□ -0.19
TRIOBP-204ENST00000406386 SYNE3Q6ZMZ3 975 aa13.84□□□□□ -0.19
TRIOBP-204ENST00000406386 CAGE1Q8TC20 777 aa13.84□□□□□ -0.19
TRIOBP-204ENST00000406386 CGNL1Q0VF96 1302 aa13.83□□□□□ -0.2
TRIOBP-204ENST00000406386 PDE3BQ13370 1112 aa13.83□□□□□ -0.2
TRIOBP-204ENST00000406386 CPLX2Q6PUV4 134 aaKnown RBP13.83□□□□□ -0.2
TRIOBP-204ENST00000406386 NEXNQ0ZGT2 675 aa13.82□□□□□ -0.2
TRIOBP-204ENST00000406386 GOLGA6L7A0A1B0GV03 622 aa13.82□□□□□ -0.2
TRIOBP-204ENST00000406386 FAM161AQ3B820 660 aa13.82□□□□□ -0.2
TRIOBP-204ENST00000406386 LEKR1Q6ZMV7 388 aa13.82□□□□□ -0.2
TRIOBP-204ENST00000406386 CENPQQ7L2Z9 268 aaPredicted RBP13.82□□□□□ -0.2
TRIOBP-204ENST00000406386 CCDC39Q9UFE4 941 aa13.82□□□□□ -0.2
TRIOBP-204ENST00000406386 CCP110O43303 1012 aa13.81□□□□□ -0.2
TRIOBP-204ENST00000406386 SIN3AQ96ST3 1273 aa13.81□□□□□ -0.2
TRIOBP-204ENST00000406386 RUFY2Q8WXA3 655 aa13.81□□□□□ -0.2
TRIOBP-204ENST00000406386 TSPYL1Q9H0U9 437 aa13.8□□□□□ -0.2
TRIOBP-204ENST00000406386 AMOTL1Q8IY63 956 aa13.8□□□□□ -0.2
TRIOBP-204ENST00000406386 BAZ1AQ9NRL2 1556 aaPredicted RBP13.8□□□□□ -0.2
TRIOBP-204ENST00000406386 FRAT2O75474 233 aaPredicted RBP13.8□□□□□ -0.2
TRIOBP-204ENST00000406386 SETD5Q9C0A6 1442 aa13.8□□□□□ -0.2
TRIOBP-204ENST00000406386 EPS15P42566 896 aa13.8□□□□□ -0.2
TRIOBP-204ENST00000406386 ERCC6Q03468 1493 aa13.8□□□□□ -0.2
TRIOBP-204ENST00000406386 CCDC43Q96MW1 224 aaKnown RBP13.8□□□□□ -0.2
TRIOBP-204ENST00000406386 KIAA0754O94854 1291 aa13.79□□□□□ -0.2
TRIOBP-204ENST00000406386 EIF4G1Q04637 1599 aaKnown RBP13.79□□□□□ -0.2
TRIOBP-204ENST00000406386 BICD2Q8TD16 824 aa13.79□□□□□ -0.2
TRIOBP-204ENST00000406386 WWC1Q8IX03 1113 aa13.79□□□□□ -0.2
TRIOBP-204ENST00000406386 HSP90AB3PQ58FF7 597 aa13.78□□□□□ -0.2
TRIOBP-204ENST00000406386 CSB-PGBD3P0DP91 1061 aa13.78□□□□□ -0.2
TRIOBP-204ENST00000406386 CPLX1O14810 134 aa13.78□□□□□ -0.2
TRIOBP-204ENST00000406386 HSP90AB2PQ58FF8 381 aa13.78□□□□□ -0.2
TRIOBP-204ENST00000406386 ZKSCAN1P17029 563 aaPredicted RBP13.78□□□□□ -0.2
TRIOBP-204ENST00000406386 GOLGA6L10A6NI86 522 aa13.78□□□□□ -0.2
TRIOBP-204ENST00000406386 NOL10Q9BSC4 688 aaKnown RBP13.77□□□□□ -0.2
TRIOBP-204ENST00000406386 SLC4A10Q6U841 1118 aa13.77□□□□□ -0.21
TRIOBP-204ENST00000406386 TRIM34Q9BYJ4 488 aa13.77□□□□□ -0.21
TRIOBP-204ENST00000406386 CCDC73Q6ZRK6 1079 aa13.77□□□□□ -0.21
TRIOBP-204ENST00000406386 SASS6Q6UVJ0 657 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms