RNA–Protein interactions for RNA: ENST00000404424.5

CLIP4-204, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP4, Length 2,480 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-204ENST00000404424 PREX2Q70Z35 1606 aa14.51□□□□□ -0.09
CLIP4-204ENST00000404424 FAM135AQ9P2D6 1515 aa14.51□□□□□ -0.09
CLIP4-204ENST00000404424 ST20-MTHFSA0A0A6YYL1 179 aa14.51□□□□□ -0.09
CLIP4-204ENST00000404424 SAMD9LQ8IVG5 1584 aa14.5□□□□□ -0.09
CLIP4-204ENST00000404424 MYBBP1AQ9BQG0 1328 aaKnown RBP14.5□□□□□ -0.09
CLIP4-204ENST00000404424 LRPPRCP42704 1394 aaKnown RBP14.5□□□□□ -0.09
CLIP4-204ENST00000404424 KDM2AQ9Y2K7 1162 aa14.5□□□□□ -0.09
CLIP4-204ENST00000404424 CDC42BPBQ9Y5S2 1711 aa14.49□□□□□ -0.09
CLIP4-204ENST00000404424 E9PCH4 1651 aa14.49□□□□□ -0.09
CLIP4-204ENST00000404424 MAST1Q9Y2H9 1570 aa14.48□□□□□ -0.09
CLIP4-204ENST00000404424 CCDC144AA2RUR9 1427 aa14.48□□□□□ -0.09
CLIP4-204ENST00000404424 PRAG1Q86YV5 1406 aa14.47□□□□□ -0.09
CLIP4-204ENST00000404424 CNGB1Q14028 1251 aaPredicted RBP14.47□□□□□ -0.09
CLIP4-204ENST00000404424 ERICH6Q7L0X2 663 aa14.46□□□□□ -0.09
CLIP4-204ENST00000404424 UNC13BO14795 1591 aa14.46□□□□□ -0.09
CLIP4-204ENST00000404424 TRPM1Q7Z4N2 1603 aa14.46□□□□□ -0.09
CLIP4-204ENST00000404424 GPRASP1Q5JY77 1395 aa14.45□□□□□ -0.1
CLIP4-204ENST00000404424 LAMC1P11047 1609 aa14.44□□□□□ -0.1
CLIP4-204ENST00000404424 PLEKHH2Q8IVE3 1493 aa14.44□□□□□ -0.1
CLIP4-204ENST00000404424 WASHC2CQ9Y4E1 1318 aa14.43□□□□□ -0.1
CLIP4-204ENST00000404424 NLRP13Q86W25 1043 aa14.42□□□□□ -0.1
CLIP4-204ENST00000404424 SYCP2Q9BX26 1530 aa14.42□□□□□ -0.1
CLIP4-204ENST00000404424 PARD3Q8TEW0 1356 aa14.42□□□□□ -0.1
CLIP4-204ENST00000404424 PLXNC1O60486 1568 aa14.42□□□□□ -0.1
CLIP4-204ENST00000404424 CCDC136Q96JN2 1154 aa14.42□□□□□ -0.1
CLIP4-204ENST00000404424 ARHGAP5Q13017 1502 aa14.41□□□□□ -0.1
CLIP4-204ENST00000404424 IQGAP3Q86VI3 1631 aa14.41□□□□□ -0.1
CLIP4-204ENST00000404424 PLA2R1Q13018 1463 aa14.41□□□□□ -0.1
CLIP4-204ENST00000404424 ATP10AO60312 1499 aa14.4□□□□□ -0.1
CLIP4-204ENST00000404424 PDE3BQ13370 1112 aa14.4□□□□□ -0.1
CLIP4-204ENST00000404424 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.4□□□□□ -0.1
CLIP4-204ENST00000404424 INSRP06213 1382 aa14.4□□□□□ -0.1
CLIP4-204ENST00000404424 EIF2AK4Q9P2K8 1649 aaKnown RBP14.4□□□□□ -0.1
CLIP4-204ENST00000404424 A2MP01023 1474 aa14.39□□□□□ -0.11
CLIP4-204ENST00000404424 TTC37Q6PGP7 1564 aa14.39□□□□□ -0.11
CLIP4-204ENST00000404424 PRDM15P57071 1507 aaPredicted RBP14.39□□□□□ -0.11
CLIP4-204ENST00000404424 COL17A1Q9UMD9 1497 aaPredicted RBP14.38□□□□□ -0.11
CLIP4-204ENST00000404424 PER1O15534 1290 aaPredicted RBP14.38□□□□□ -0.11
CLIP4-204ENST00000404424 SHROOM2Q13796 1616 aa14.38□□□□□ -0.11
CLIP4-204ENST00000404424 DUOX2Q9NRD8 1548 aa14.38□□□□□ -0.11
CLIP4-204ENST00000404424 ZMYM4Q5VZL5 1548 aa14.37□□□□□ -0.11
CLIP4-204ENST00000404424 ERBINQ96RT1 1412 aa14.37□□□□□ -0.11
CLIP4-204ENST00000404424 MYO5CQ9NQX4 1742 aa14.37□□□□□ -0.11
CLIP4-204ENST00000404424 MAGI2Q86UL8 1455 aa14.37□□□□□ -0.11
CLIP4-204ENST00000404424 MYT1LQ9UL68 1186 aa14.37□□□□□ -0.11
CLIP4-204ENST00000404424 NBPF1Q3BBV0 1214 aa14.36□□□□□ -0.11
CLIP4-204ENST00000404424 RGL3Q3MIN7 710 aa14.36□□□□□ -0.11
CLIP4-204ENST00000404424 ABCC2Q92887 1545 aa14.36□□□□□ -0.11
CLIP4-204ENST00000404424 TESK2Q96S53 571 aa14.35□□□□□ -0.11
CLIP4-204ENST00000404424 RRP1P56182 461 aaKnown RBP14.35□□□□□ -0.11
CLIP4-204ENST00000404424 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.34□□□□□ -0.11
CLIP4-204ENST00000404424 CHD1O14646 1710 aa14.34□□□□□ -0.11
CLIP4-204ENST00000404424 TMF1P82094 1093 aa14.33□□□□□ -0.12
CLIP4-204ENST00000404424 RCAN3Q9UKA8 241 aa14.33□□□□□ -0.12
CLIP4-204ENST00000404424 PLCH2O75038 1416 aa14.32□□□□□ -0.12
CLIP4-204ENST00000404424 DISP3Q9P2K9 1392 aa14.32□□□□□ -0.12
CLIP4-204ENST00000404424 NOP58Q9Y2X3 529 aaKnown RBP14.31□□□□□ -0.12
CLIP4-204ENST00000404424 BLMP54132 1417 aaPredicted RBP14.3□□□□□ -0.12
CLIP4-204ENST00000404424 RNF17Q9BXT8 1623 aaKnown RBP14.3□□□□□ -0.12
CLIP4-204ENST00000404424 SENP3-EIF4A1A0A087X0R7 540 aa14.3□□□□□ -0.12
CLIP4-204ENST00000404424 EFCAB2Q5VUJ9 269 aa14.3□□□□□ -0.12
CLIP4-204ENST00000404424 STAC3Q96MF2 364 aa14.3□□□□□ -0.12
CLIP4-204ENST00000404424 PANK3Q9H999 370 aa14.29□□□□□ -0.12
CLIP4-204ENST00000404424 ANP32AP39687 249 aaKnown RBP14.29□□□□□ -0.12
CLIP4-204ENST00000404424 ABCC1P33527 1531 aa14.26□□□□□ -0.13
CLIP4-204ENST00000404424 CC2D1BQ5T0F9 858 aaKnown RBP14.26□□□□□ -0.13
CLIP4-204ENST00000404424 UHRF1BP1LA0JNW5 1464 aa14.26□□□□□ -0.13
CLIP4-204ENST00000404424 EXOC6Q8TAG9 804 aa14.26□□□□□ -0.13
CLIP4-204ENST00000404424 TCERG1O14776 1098 aaKnown RBP14.25□□□□□ -0.13
CLIP4-204ENST00000404424 IPO9Q96P70 1041 aaKnown RBP14.25□□□□□ -0.13
CLIP4-204ENST00000404424 RTEL1-TNFRSF6BF6WH68 1400 aa14.25□□□□□ -0.13
CLIP4-204ENST00000404424 SALL2Q9Y467 1007 aaPredicted RBP14.24□□□□□ -0.13
CLIP4-204ENST00000404424 CDCA8Q53HL2 280 aa14.24□□□□□ -0.13
CLIP4-204ENST00000404424 ERCC6L2Q5T890 1561 aa14.24□□□□□ -0.13
CLIP4-204ENST00000404424 ZCCHC11Q5TAX3 1644 aaKnown RBP14.23□□□□□ -0.13
CLIP4-204ENST00000404424 ARAP3Q8WWN8 1544 aa14.23□□□□□ -0.13
CLIP4-204ENST00000404424 BCL11AQ9H165 835 aa14.23□□□□□ -0.13
CLIP4-204ENST00000404424 MADDQ8WXG6 1647 aa14.23□□□□□ -0.13
CLIP4-204ENST00000404424 TRPM2O94759 1503 aa14.23□□□□□ -0.13
CLIP4-204ENST00000404424 SCAPERQ9BY12 1400 aa14.22□□□□□ -0.13
CLIP4-204ENST00000404424 TRAPPC8Q9Y2L5 1435 aa14.22□□□□□ -0.13
CLIP4-204ENST00000404424 IQGAP1P46940 1657 aa14.22□□□□□ -0.13
CLIP4-204ENST00000404424 WDR7Q9Y4E6 1490 aa14.22□□□□□ -0.13
CLIP4-204ENST00000404424 CDCA7LQ96GN5 454 aa14.22□□□□□ -0.13
CLIP4-204ENST00000404424 PTPRTO14522 1441 aa14.21□□□□□ -0.13
CLIP4-204ENST00000404424 MS4A1P11836 297 aa14.21□□□□□ -0.13
CLIP4-204ENST00000404424 KNSTRNQ9Y448 316 aa14.21□□□□□ -0.13
CLIP4-204ENST00000404424 SPAG9O60271 1321 aaKnown RBP14.2□□□□□ -0.14
CLIP4-204ENST00000404424 SCAF11Q99590 1463 aaKnown RBP14.2□□□□□ -0.14
CLIP4-204ENST00000404424 SPHKAPQ2M3C7 1700 aa14.2□□□□□ -0.14
CLIP4-204ENST00000404424 ZBTB47Q9UFB7 747 aaPredicted RBP14.2□□□□□ -0.14
CLIP4-204ENST00000404424 CEP152O94986 1710 aa14.19□□□□□ -0.14
CLIP4-204ENST00000404424 SYNMO15061 1565 aa14.19□□□□□ -0.14
CLIP4-204ENST00000404424 PAK3O75914 559 aaPredicted RBP14.19□□□□□ -0.14
CLIP4-204ENST00000404424 SLC24A1O60721 1099 aa14.18□□□□□ -0.14
CLIP4-204ENST00000404424 DEPDC5O75140 1603 aa14.18□□□□□ -0.14
CLIP4-204ENST00000404424 NEURL4Q96JN8 1562 aa14.17□□□□□ -0.14
CLIP4-204ENST00000404424 ZFYVE16Q7Z3T8 1539 aa14.17□□□□□ -0.14
CLIP4-204ENST00000404424 NPC1L1Q9UHC9 1359 aa14.17□□□□□ -0.14
CLIP4-204ENST00000404424 EIF3AQ14152 1382 aaKnown RBP14.17□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms