RNA–Protein interactions for RNA: ENST00000398604.2

PCDHGA8-201, Transcript of protocadherin gamma subfamily A, 8, humanhuman

TSL 1 (best) BASIC

Gene PCDHGA8, Length 4,605 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA8-201ENST00000398604 HECW1Q76N89 1606 aa14.75□□□□□ -0.05
PCDHGA8-201ENST00000398604 WDR97A6NE52 1622 aa14.75□□□□□ -0.05
PCDHGA8-201ENST00000398604 FAM69CQ0P6D2 419 aa14.75□□□□□ -0.05
PCDHGA8-201ENST00000398604 HSP90AB1P08238 724 aaKnown RBP14.74□□□□□ -0.05
PCDHGA8-201ENST00000398604 CLUAP1Q96AJ1 413 aa14.74□□□□□ -0.05
PCDHGA8-201ENST00000398604 RTN4Q9NQC3 1192 aaKnown RBP14.74□□□□□ -0.05
PCDHGA8-201ENST00000398604 WASHC2CQ9Y4E1 1318 aa14.74□□□□□ -0.05
PCDHGA8-201ENST00000398604 DNTTIP2Q5QJE6 756 aaKnown RBP14.73□□□□□ -0.05
PCDHGA8-201ENST00000398604 TRAK1Q9UPV9 953 aa14.73□□□□□ -0.05
PCDHGA8-201ENST00000398604 TROQ12816 1431 aaPredicted RBP14.72□□□□□ -0.05
PCDHGA8-201ENST00000398604 MS4A1P11836 297 aa14.72□□□□□ -0.05
PCDHGA8-201ENST00000398604 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.72□□□□□ -0.05
PCDHGA8-201ENST00000398604 NGDNQ8NEJ9 315 aaKnown RBP14.71□□□□□ -0.05
PCDHGA8-201ENST00000398604 AMER1Q5JTC6 1135 aaPredicted RBP14.71□□□□□ -0.05
PCDHGA8-201ENST00000398604 FGD6Q6ZV73 1430 aa14.71□□□□□ -0.05
PCDHGA8-201ENST00000398604 CCDC146Q8IYE0 955 aa14.71□□□□□ -0.06
PCDHGA8-201ENST00000398604 ROCK2O75116 1388 aaKnown RBP14.71□□□□□ -0.06
PCDHGA8-201ENST00000398604 EHBP1L1Q8N3D4 1523 aa14.7□□□□□ -0.06
PCDHGA8-201ENST00000398604 PLEKHH2Q8IVE3 1493 aa14.7□□□□□ -0.06
PCDHGA8-201ENST00000398604 CHMP4BQ9H444 224 aaKnown RBP14.7□□□□□ -0.06
PCDHGA8-201ENST00000398604 PCF11O94913 1555 aaKnown RBP14.7□□□□□ -0.06
PCDHGA8-201ENST00000398604 NCOA2Q15596 1464 aa14.69□□□□□ -0.06
PCDHGA8-201ENST00000398604 ITPRIPQ8IWB1 547 aa14.67□□□□□ -0.06
PCDHGA8-201ENST00000398604 KTN1Q86UP2 1357 aaKnown RBP14.67□□□□□ -0.06
PCDHGA8-201ENST00000398604 ELL2O00472 640 aaPredicted RBP14.67□□□□□ -0.06
PCDHGA8-201ENST00000398604 MIA2Q96PC5 1412 aa14.67□□□□□ -0.06
PCDHGA8-201ENST00000398604 GOLGA6L4A6NEF3 574 aa14.66□□□□□ -0.06
PCDHGA8-201ENST00000398604 NCBP3Q53F19 620 aaKnown RBP14.66□□□□□ -0.06
PCDHGA8-201ENST00000398604 SLC4A10Q6U841 1118 aa14.66□□□□□ -0.06
PCDHGA8-201ENST00000398604 RCAN3Q9UKA8 241 aa14.65□□□□□ -0.06
PCDHGA8-201ENST00000398604 CHMP3Q9Y3E7 222 aa14.65□□□□□ -0.06
PCDHGA8-201ENST00000398604 RRP7AQ9Y3A4 280 aaKnown RBP14.65□□□□□ -0.06
PCDHGA8-201ENST00000398604 ADAMTS12P58397 1594 aa14.64□□□□□ -0.07
PCDHGA8-201ENST00000398604 EID1Q9Y6B2 187 aa14.64□□□□□ -0.07
PCDHGA8-201ENST00000398604 NOP58Q9Y2X3 529 aaKnown RBP14.64□□□□□ -0.07
PCDHGA8-201ENST00000398604 ST20-MTHFSA0A0A6YYL1 179 aa14.63□□□□□ -0.07
PCDHGA8-201ENST00000398604 AMPHP49418 695 aa14.63□□□□□ -0.07
PCDHGA8-201ENST00000398604 EPRSP07814 1512 aaKnown RBP14.63□□□□□ -0.07
PCDHGA8-201ENST00000398604 IPO8O15397 1037 aaKnown RBP14.63□□□□□ -0.07
PCDHGA8-201ENST00000398604 MAP3K1Q13233 1512 aa14.63□□□□□ -0.07
PCDHGA8-201ENST00000398604 ARHGAP5Q13017 1502 aa14.62□□□□□ -0.07
PCDHGA8-201ENST00000398604 EIF4G3O43432 1585 aaKnown RBP14.62□□□□□ -0.07
PCDHGA8-201ENST00000398604 HSCBQ8IWL3 235 aa14.61□□□□□ -0.07
PCDHGA8-201ENST00000398604 SLKQ9H2G2 1235 aaPredicted RBP14.61□□□□□ -0.07
PCDHGA8-201ENST00000398604 SMC4Q9NTJ3 1288 aa14.61□□□□□ -0.07
PCDHGA8-201ENST00000398604 TERF2IPQ9NYB0 399 aa14.61□□□□□ -0.07
PCDHGA8-201ENST00000398604 BCL2L13Q9BXK5 485 aa14.6□□□□□ -0.07
PCDHGA8-201ENST00000398604 STK31Q9BXU1 1019 aa14.6□□□□□ -0.07
PCDHGA8-201ENST00000398604 GLIPR1L2Q4G1C9 344 aa14.6□□□□□ -0.07
PCDHGA8-201ENST00000398604 KIAA1211Q6ZU35 1233 aa14.59□□□□□ -0.07
PCDHGA8-201ENST00000398604 GORABQ5T7V8 394 aa14.58□□□□□ -0.07
PCDHGA8-201ENST00000398604 CLSTN1O94985 981 aa14.57□□□□□ -0.08
PCDHGA8-201ENST00000398604 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.57□□□□□ -0.08
PCDHGA8-201ENST00000398604 KIF15Q9NS87 1388 aa14.57□□□□□ -0.08
PCDHGA8-201ENST00000398604 UGGT2Q9NYU1 1516 aa14.56□□□□□ -0.08
PCDHGA8-201ENST00000398604 RALBP1Q15311 655 aa14.56□□□□□ -0.08
PCDHGA8-201ENST00000398604 NUP160Q12769 1436 aa14.56□□□□□ -0.08
PCDHGA8-201ENST00000398604 GZF1Q9H116 711 aaPredicted RBP14.56□□□□□ -0.08
PCDHGA8-201ENST00000398604 ABCA5Q8WWZ7 1642 aa14.55□□□□□ -0.08
PCDHGA8-201ENST00000398604 MINK1Q8N4C8 1332 aaPredicted RBP14.55□□□□□ -0.08
PCDHGA8-201ENST00000398604 MCCP23508 829 aa14.55□□□□□ -0.08
PCDHGA8-201ENST00000398604 TAF7LQ5H9L4 462 aa14.55□□□□□ -0.08
PCDHGA8-201ENST00000398604 PANK3Q9H999 370 aa14.55□□□□□ -0.08
PCDHGA8-201ENST00000398604 SUPT6HQ7KZ85 1726 aaKnown RBP14.55□□□□□ -0.08
PCDHGA8-201ENST00000398604 PLB1Q6P1J6 1458 aa14.55□□□□□ -0.08
PCDHGA8-201ENST00000398604 GTF2E1P29083 439 aaPredicted RBP14.55□□□□□ -0.08
PCDHGA8-201ENST00000398604 NOL8Q76FK4 1167 aaKnown RBP14.55□□□□□ -0.08
PCDHGA8-201ENST00000398604 TRIM6-TRIM34B2RNG4 842 aa14.54□□□□□ -0.08
PCDHGA8-201ENST00000398604 MAPKBP1O60336 1514 aa14.54□□□□□ -0.08
PCDHGA8-201ENST00000398604 NLRP13Q86W25 1043 aa14.54□□□□□ -0.08
PCDHGA8-201ENST00000398604 RWDD1Q9H446 243 aaPredicted RBP14.54□□□□□ -0.08
PCDHGA8-201ENST00000398604 GNL2Q13823 731 aaKnown RBP14.53□□□□□ -0.08
PCDHGA8-201ENST00000398604 NAP1L5Q96NT1 182 aaPredicted RBP14.53□□□□□ -0.08
PCDHGA8-201ENST00000398604 ZNF644Q9H582 1327 aaPredicted RBP14.53□□□□□ -0.08
PCDHGA8-201ENST00000398604 TCERG1O14776 1098 aaKnown RBP14.53□□□□□ -0.08
PCDHGA8-201ENST00000398604 MFAP1P55081 439 aaKnown RBP14.53□□□□□ -0.08
PCDHGA8-201ENST00000398604 ERICH6BQ5W0A0 696 aa14.53□□□□□ -0.08
PCDHGA8-201ENST00000398604 NGEFQ8N5V2 710 aa14.53□□□□□ -0.08
PCDHGA8-201ENST00000398604 CALD1Q05682 793 aaKnown RBP14.53□□□□□ -0.08
PCDHGA8-201ENST00000398604 THOC2Q8NI27 1593 aaKnown RBP14.52□□□□□ -0.08
PCDHGA8-201ENST00000398604 STAC3Q96MF2 364 aa14.52□□□□□ -0.08
PCDHGA8-201ENST00000398604 ANKRD50Q9ULJ7 1429 aa14.52□□□□□ -0.09
PCDHGA8-201ENST00000398604 FOXD4L1Q9NU39 408 aa14.51□□□□□ -0.09
PCDHGA8-201ENST00000398604 PLIN1O60240 522 aa14.5□□□□□ -0.09
PCDHGA8-201ENST00000398604 DEKP35659 375 aaKnown RBP14.5□□□□□ -0.09
PCDHGA8-201ENST00000398604 TARBP1Q13395 1621 aaKnown RBP14.5□□□□□ -0.09
PCDHGA8-201ENST00000398604 CTTNBP2Q8WZ74 1663 aa14.5□□□□□ -0.09
PCDHGA8-201ENST00000398604 CDK13Q14004 1512 aaKnown RBP14.5□□□□□ -0.09
PCDHGA8-201ENST00000398604 CCDC144AA2RUR9 1427 aa14.5□□□□□ -0.09
PCDHGA8-201ENST00000398604 PTPRKQ15262 1439 aa14.5□□□□□ -0.09
PCDHGA8-201ENST00000398604 PBRM1Q86U86 1689 aa14.49□□□□□ -0.09
PCDHGA8-201ENST00000398604 FRAT2O75474 233 aaPredicted RBP14.49□□□□□ -0.09
PCDHGA8-201ENST00000398604 PRKRIP1Q9H875 184 aaPredicted RBP14.49□□□□□ -0.09
PCDHGA8-201ENST00000398604 CD109Q6YHK3 1445 aa14.48□□□□□ -0.09
PCDHGA8-201ENST00000398604 AFAP1Q8N556 730 aa14.48□□□□□ -0.09
PCDHGA8-201ENST00000398604 CFAP43Q8NDM7 1665 aa14.48□□□□□ -0.09
PCDHGA8-201ENST00000398604 KIF14Q15058 1648 aa14.48□□□□□ -0.09
PCDHGA8-201ENST00000398604 NECTIN2Q92692 538 aa14.48□□□□□ -0.09
PCDHGA8-201ENST00000398604 TOMM22Q9NS69 142 aa14.47□□□□□ -0.09
PCDHGA8-201ENST00000398604 DRC7Q8IY82 874 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms