RNA–Protein interactions for RNA: ENST00000398460.3

MEG3-201, Transcript of maternally expressed 3, humanhuman

TSL 2

Gene MEG3, Length 3,382 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEG3-201ENST00000398460 DHX29Q7Z478 1369 aaKnown RBP16.34■□□□□ 0.21
MEG3-201ENST00000398460 RTL5Q5HYW3 569 aaPredicted RBP16.34■□□□□ 0.21
MEG3-201ENST00000398460 IL27Q8NEV9 243 aa16.34■□□□□ 0.21
MEG3-201ENST00000398460 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.34■□□□□ 0.21
MEG3-201ENST00000398460 MBD5Q9P267 1494 aa16.33■□□□□ 0.21
MEG3-201ENST00000398460 NUDCQ9Y266 331 aa16.32■□□□□ 0.2
MEG3-201ENST00000398460 ARHGAP5Q13017 1502 aa16.31■□□□□ 0.2
MEG3-201ENST00000398460 NPM2Q86SE8 214 aaKnown RBP16.31■□□□□ 0.2
MEG3-201ENST00000398460 RALGAPBQ86X10 1494 aa16.31■□□□□ 0.2
MEG3-201ENST00000398460 CDC42BPAQ5VT25 1732 aa16.31■□□□□ 0.2
MEG3-201ENST00000398460 CROCC2H7BZ55 1655 aa16.3■□□□□ 0.2
MEG3-201ENST00000398460 NBPF1Q3BBV0 1214 aa16.3■□□□□ 0.2
MEG3-201ENST00000398460 UHRF1BP1Q6BDS2 1440 aa16.3■□□□□ 0.2
MEG3-201ENST00000398460 RALBP1Q15311 655 aa16.29■□□□□ 0.2
MEG3-201ENST00000398460 PNISRQ8TF01 805 aaKnown RBP16.29■□□□□ 0.2
MEG3-201ENST00000398460 MYBBP1AQ9BQG0 1328 aaKnown RBP16.28■□□□□ 0.2
MEG3-201ENST00000398460 EFCAB2Q5VUJ9 269 aa16.27■□□□□ 0.2
MEG3-201ENST00000398460 CC2D1BQ5T0F9 858 aaKnown RBP16.26■□□□□ 0.19
MEG3-201ENST00000398460 ARHGEF12Q9NZN5 1544 aa16.26■□□□□ 0.19
MEG3-201ENST00000398460 ZBTB47Q9UFB7 747 aaPredicted RBP16.26■□□□□ 0.19
MEG3-201ENST00000398460 ANP32AP39687 249 aaKnown RBP16.25■□□□□ 0.19
MEG3-201ENST00000398460 KDM5CP41229 1560 aa16.25■□□□□ 0.19
MEG3-201ENST00000398460 BCORL1Q5H9F3 1711 aa16.25■□□□□ 0.19
MEG3-201ENST00000398460 FAM135AQ9P2D6 1515 aa16.25■□□□□ 0.19
MEG3-201ENST00000398460 KTN1Q86UP2 1357 aaKnown RBP16.25■□□□□ 0.19
MEG3-201ENST00000398460 SYCP2Q9BX26 1530 aa16.24■□□□□ 0.19
MEG3-201ENST00000398460 SMG6Q86US8 1419 aaKnown RBP16.24■□□□□ 0.19
MEG3-201ENST00000398460 NLRP13Q86W25 1043 aa16.23■□□□□ 0.19
MEG3-201ENST00000398460 LAS1LQ9Y4W2 734 aaKnown RBP16.23■□□□□ 0.19
MEG3-201ENST00000398460 ARHGEF5Q12774 1597 aa16.23■□□□□ 0.19
MEG3-201ENST00000398460 TMF1P82094 1093 aa16.22■□□□□ 0.19
MEG3-201ENST00000398460 SAMD9LQ8IVG5 1584 aa16.22■□□□□ 0.19
MEG3-201ENST00000398460 BRD4O60885 1362 aaPredicted RBP16.22■□□□□ 0.19
MEG3-201ENST00000398460 PLEKHH2Q8IVE3 1493 aa16.21■□□□□ 0.19
MEG3-201ENST00000398460 KDM5DQ9BY66 1539 aa16.2■□□□□ 0.18
MEG3-201ENST00000398460 PRAG1Q86YV5 1406 aa16.19■□□□□ 0.18
MEG3-201ENST00000398460 PANK3Q9H999 370 aa16.19■□□□□ 0.18
MEG3-201ENST00000398460 SPAG9O60271 1321 aaKnown RBP16.18■□□□□ 0.18
MEG3-201ENST00000398460 POLR1AO95602 1720 aaPredicted RBP16.18■□□□□ 0.18
MEG3-201ENST00000398460 IPO9Q96P70 1041 aaKnown RBP16.18■□□□□ 0.18
MEG3-201ENST00000398460 AFAP1Q8N556 730 aa16.17■□□□□ 0.18
MEG3-201ENST00000398460 PREX2Q70Z35 1606 aa16.16■□□□□ 0.18
MEG3-201ENST00000398460 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.15■□□□□ 0.18
MEG3-201ENST00000398460 TTC37Q6PGP7 1564 aa16.14■□□□□ 0.17
MEG3-201ENST00000398460 RCAN3Q9UKA8 241 aa16.14■□□□□ 0.17
MEG3-201ENST00000398460 CDC42BPBQ9Y5S2 1711 aa16.14■□□□□ 0.17
MEG3-201ENST00000398460 KNSTRNQ9Y448 316 aa16.13■□□□□ 0.17
MEG3-201ENST00000398460 A2MP01023 1474 aa16.13■□□□□ 0.17
MEG3-201ENST00000398460 EIF5BO60841 1220 aaKnown RBP16.12■□□□□ 0.17
MEG3-201ENST00000398460 NEFMP07197 916 aa16.12■□□□□ 0.17
MEG3-201ENST00000398460 PLA2R1Q13018 1463 aa16.12■□□□□ 0.17
MEG3-201ENST00000398460 ABCC2Q92887 1545 aa16.12■□□□□ 0.17
MEG3-201ENST00000398460 DISP3Q9P2K9 1392 aa16.12■□□□□ 0.17
MEG3-201ENST00000398460 TESK2Q96S53 571 aa16.11■□□□□ 0.17
MEG3-201ENST00000398460 PLCH2O75038 1416 aa16.1■□□□□ 0.17
MEG3-201ENST00000398460 ERBINQ96RT1 1412 aa16.1■□□□□ 0.17
MEG3-201ENST00000398460 ERCC6L2Q5T890 1561 aa16.1■□□□□ 0.17
MEG3-201ENST00000398460 CHD1O14646 1710 aa16.1■□□□□ 0.17
MEG3-201ENST00000398460 RRP1P56182 461 aaKnown RBP16.1■□□□□ 0.17
MEG3-201ENST00000398460 LRPPRCP42704 1394 aaKnown RBP16.1■□□□□ 0.17
MEG3-201ENST00000398460 KIF3BO15066 747 aa16.09■□□□□ 0.17
MEG3-201ENST00000398460 PER1O15534 1290 aaPredicted RBP16.09■□□□□ 0.17
MEG3-201ENST00000398460 WDR43Q15061 677 aaKnown RBP eCLIP16.09■□□□□ 0.17
MEG3-201ENST00000398460 DUOX2Q9NRD8 1548 aa16.09■□□□□ 0.17
MEG3-201ENST00000398460 PDE3BQ13370 1112 aa16.08■□□□□ 0.17
MEG3-201ENST00000398460 TRAPPC8Q9Y2L5 1435 aa16.08■□□□□ 0.16
MEG3-201ENST00000398460 PARD3Q8TEW0 1356 aa16.08■□□□□ 0.16
MEG3-201ENST00000398460 CDCA8Q53HL2 280 aa16.08■□□□□ 0.16
MEG3-201ENST00000398460 CDCA7LQ96GN5 454 aa16.08■□□□□ 0.16
MEG3-201ENST00000398460 EXOC6Q8TAG9 804 aa16.07■□□□□ 0.16
MEG3-201ENST00000398460 GPRASP1Q5JY77 1395 aa16.07■□□□□ 0.16
MEG3-201ENST00000398460 WASHC2CQ9Y4E1 1318 aa16.07■□□□□ 0.16
MEG3-201ENST00000398460 KANK1Q14678 1352 aa16.06■□□□□ 0.16
MEG3-201ENST00000398460 RNF123Q5XPI4 1314 aa16.06■□□□□ 0.16
MEG3-201ENST00000398460 CHGAP10645 457 aaKnown RBP16.06■□□□□ 0.16
MEG3-201ENST00000398460 COL17A1Q9UMD9 1497 aaPredicted RBP16.04■□□□□ 0.16
MEG3-201ENST00000398460 MYO5CQ9NQX4 1742 aa16.04■□□□□ 0.16
MEG3-201ENST00000398460 MAST1Q9Y2H9 1570 aa16.03■□□□□ 0.16
MEG3-201ENST00000398460 TRPM1Q7Z4N2 1603 aa16.02■□□□□ 0.16
MEG3-201ENST00000398460 UNC13BO14795 1591 aa16.02■□□□□ 0.15
MEG3-201ENST00000398460 PLIN1O60240 522 aa16.02■□□□□ 0.15
MEG3-201ENST00000398460 BRPF3Q9ULD4 1205 aa16.02■□□□□ 0.15
MEG3-201ENST00000398460 ADAMTS8Q9UP79 889 aa16.01■□□□□ 0.15
MEG3-201ENST00000398460 SKAP1Q86WV1 359 aa16■□□□□ 0.15
MEG3-201ENST00000398460 PLXNC1O60486 1568 aa16■□□□□ 0.15
MEG3-201ENST00000398460 IQGAP3Q86VI3 1631 aa15.99■□□□□ 0.15
MEG3-201ENST00000398460 NPM1P06748 294 aaKnown RBP eCLIP15.99■□□□□ 0.15
MEG3-201ENST00000398460 SCAPERQ9BY12 1400 aa15.98■□□□□ 0.15
MEG3-201ENST00000398460 EIF2AK4Q9P2K8 1649 aaKnown RBP15.98■□□□□ 0.15
MEG3-201ENST00000398460 PPP2R1AP30153 589 aa15.97■□□□□ 0.15
MEG3-201ENST00000398460 SLC4A3P48751 1232 aa15.97■□□□□ 0.15
MEG3-201ENST00000398460 SHROOM2Q13796 1616 aa15.97■□□□□ 0.15
MEG3-201ENST00000398460 STAC3Q96MF2 364 aa15.97■□□□□ 0.15
MEG3-201ENST00000398460 EIF3AQ14152 1382 aaKnown RBP15.97■□□□□ 0.15
MEG3-201ENST00000398460 CFAP70Q5T0N1 1121 aa15.96■□□□□ 0.15
MEG3-201ENST00000398460 PRDM15P57071 1507 aaPredicted RBP15.96■□□□□ 0.15
MEG3-201ENST00000398460 ATP10AO60312 1499 aa15.96■□□□□ 0.15
MEG3-201ENST00000398460 ABCC1P33527 1531 aa15.95■□□□□ 0.14
MEG3-201ENST00000398460 ZCCHC11Q5TAX3 1644 aaKnown RBP15.95■□□□□ 0.14
MEG3-201ENST00000398460 FANCAO15360 1455 aa15.94■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms