RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 KIF3BO15066 747 aa15.57■□□□□ 0.08
PDXDC1-202ENST00000396410 RALBP1Q15311 655 aa15.56■□□□□ 0.08
PDXDC1-202ENST00000396410 NBPF1Q3BBV0 1214 aa15.56■□□□□ 0.08
PDXDC1-202ENST00000396410 PREX2Q70Z35 1606 aa15.56■□□□□ 0.08
PDXDC1-202ENST00000396410 RALGAPBQ86X10 1494 aa15.56■□□□□ 0.08
PDXDC1-202ENST00000396410 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.56■□□□□ 0.082e-7■■■■■ 47.7
PDXDC1-202ENST00000396410 CC2D1BQ5T0F9 858 aaKnown RBP15.56■□□□□ 0.08
PDXDC1-202ENST00000396410 PLCH2O75038 1416 aa15.56■□□□□ 0.08
PDXDC1-202ENST00000396410 ERCC6L2Q5T890 1561 aa15.55■□□□□ 0.08
PDXDC1-202ENST00000396410 TTC37Q6PGP7 1564 aa15.54■□□□□ 0.08
PDXDC1-202ENST00000396410 KTN1Q86UP2 1357 aaKnown RBP15.54■□□□□ 0.08
PDXDC1-202ENST00000396410 MYT1Q01538 1121 aa15.54■□□□□ 0.08
PDXDC1-202ENST00000396410 ARHGEF12Q9NZN5 1544 aa15.54■□□□□ 0.08
PDXDC1-202ENST00000396410 PPP4R2Q9NY27 417 aa15.53■□□□□ 0.08
PDXDC1-202ENST00000396410 UHRF1BP1Q6BDS2 1440 aa15.53■□□□□ 0.08
PDXDC1-202ENST00000396410 MYBBP1AQ9BQG0 1328 aaKnown RBP15.53■□□□□ 0.08
PDXDC1-202ENST00000396410 ERICH6Q7L0X2 663 aa15.52■□□□□ 0.08
PDXDC1-202ENST00000396410 CDC42BPBQ9Y5S2 1711 aa15.51■□□□□ 0.07
PDXDC1-202ENST00000396410 DUOX2Q9NRD8 1548 aa15.51■□□□□ 0.07
PDXDC1-202ENST00000396410 MYO5CQ9NQX4 1742 aa15.51■□□□□ 0.07
PDXDC1-202ENST00000396410 KDM5DQ9BY66 1539 aa15.5■□□□□ 0.07
PDXDC1-202ENST00000396410 CDCA8Q53HL2 280 aa15.5■□□□□ 0.07
PDXDC1-202ENST00000396410 ERICH6BQ5W0A0 696 aa15.49■□□□□ 0.07
PDXDC1-202ENST00000396410 KNSTRNQ9Y448 316 aa15.49■□□□□ 0.07
PDXDC1-202ENST00000396410 TRAPPC8Q9Y2L5 1435 aa15.49■□□□□ 0.07
PDXDC1-202ENST00000396410 ERBINQ96RT1 1412 aa15.48■□□□□ 0.07
PDXDC1-202ENST00000396410 NLRP13Q86W25 1043 aa15.48■□□□□ 0.07
PDXDC1-202ENST00000396410 OSCARQ8IYS5 282 aa15.47■□□□□ 0.07
PDXDC1-202ENST00000396410 NUDCQ9Y266 331 aa15.47■□□□□ 0.07
PDXDC1-202ENST00000396410 B4GALNT3Q6L9W6 998 aa15.47■□□□□ 0.07
PDXDC1-202ENST00000396410 PANK3Q9H999 370 aa15.47■□□□□ 0.07
PDXDC1-202ENST00000396410 PRAG1Q86YV5 1406 aa15.46■□□□□ 0.07
PDXDC1-202ENST00000396410 DHX29Q7Z478 1369 aaKnown RBP15.46■□□□□ 0.07
PDXDC1-202ENST00000396410 SCAPERQ9BY12 1400 aa15.46■□□□□ 0.07
PDXDC1-202ENST00000396410 SHROOM2Q13796 1616 aa15.46■□□□□ 0.07
PDXDC1-202ENST00000396410 KDM5CP41229 1560 aa15.46■□□□□ 0.06
PDXDC1-202ENST00000396410 CCDC136Q96JN2 1154 aa15.46■□□□□ 0.06
PDXDC1-202ENST00000396410 GGT6Q6P531 493 aa15.45■□□□□ 0.06
PDXDC1-202ENST00000396410 ZCCHC11Q5TAX3 1644 aaKnown RBP15.44■□□□□ 0.06
PDXDC1-202ENST00000396410 PNISRQ8TF01 805 aaKnown RBP15.44■□□□□ 0.06
PDXDC1-202ENST00000396410 WDR43Q15061 677 aaKnown RBP eCLIP15.44■□□□□ 0.06
PDXDC1-202ENST00000396410 RBM19Q9Y4C8 960 aaKnown RBP15.44■□□□□ 0.06
PDXDC1-202ENST00000396410 FANCAO15360 1455 aa15.43■□□□□ 0.06
PDXDC1-202ENST00000396410 BRD4O60885 1362 aaPredicted RBP15.43■□□□□ 0.06
PDXDC1-202ENST00000396410 UHRF1BP1LA0JNW5 1464 aa15.43■□□□□ 0.06
PDXDC1-202ENST00000396410 WDR7Q9Y4E6 1490 aa15.42■□□□□ 0.06
PDXDC1-202ENST00000396410 MAST1Q9Y2H9 1570 aa15.41■□□□□ 0.06
PDXDC1-202ENST00000396410 ADGRL1O94910 1474 aa15.41■□□□□ 0.06
PDXDC1-202ENST00000396410 A2MP01023 1474 aa15.41■□□□□ 0.06
PDXDC1-202ENST00000396410 BCORL1Q5H9F3 1711 aa15.4■□□□□ 0.06
PDXDC1-202ENST00000396410 EIF3AQ14152 1382 aaKnown RBP15.4■□□□□ 0.06
PDXDC1-202ENST00000396410 STAC3Q96MF2 364 aa15.39■□□□□ 0.05
PDXDC1-202ENST00000396410 PLXNC1O60486 1568 aa15.38■□□□□ 0.05
PDXDC1-202ENST00000396410 ABCC1P33527 1531 aa15.37■□□□□ 0.05
PDXDC1-202ENST00000396410 RTEL1-TNFRSF6BF6WH68 1400 aa15.37■□□□□ 0.05
PDXDC1-202ENST00000396410 CLASP1Q7Z460 1538 aa15.37■□□□□ 0.05
PDXDC1-202ENST00000396410 PLA2R1Q13018 1463 aa15.37■□□□□ 0.05
PDXDC1-202ENST00000396410 DISP3Q9P2K9 1392 aa15.37■□□□□ 0.05
PDXDC1-202ENST00000396410 UNC13BO14795 1591 aa15.36■□□□□ 0.05
PDXDC1-202ENST00000396410 SLC24A1O60721 1099 aa15.36■□□□□ 0.05
PDXDC1-202ENST00000396410 ASXL2Q76L83 1435 aa15.36■□□□□ 0.05
PDXDC1-202ENST00000396410 SMG6Q86US8 1419 aaKnown RBP15.35■□□□□ 0.05
PDXDC1-202ENST00000396410 POLR1AO95602 1720 aaPredicted RBP15.35■□□□□ 0.05
PDXDC1-202ENST00000396410 WASHC2CQ9Y4E1 1318 aa15.35■□□□□ 0.05
PDXDC1-202ENST00000396410 IQGAP3Q86VI3 1631 aa15.34■□□□□ 0.05
PDXDC1-202ENST00000396410 EIF2AK4Q9P2K8 1649 aaKnown RBP15.34■□□□□ 0.05
PDXDC1-202ENST00000396410 SENP3Q9H4L4 574 aaPredicted RBP15.34■□□□□ 0.05
PDXDC1-202ENST00000396410 TESK2Q96S53 571 aa15.33■□□□□ 0.04
PDXDC1-202ENST00000396410 CFAP70Q5T0N1 1121 aa15.33■□□□□ 0.04
PDXDC1-202ENST00000396410 RCAN3Q9UKA8 241 aa15.33■□□□□ 0.04
PDXDC1-202ENST00000396410 GPRASP1Q5JY77 1395 aa15.32■□□□□ 0.04
PDXDC1-202ENST00000396410 PDE3BQ13370 1112 aa15.31■□□□□ 0.04
PDXDC1-202ENST00000396410 ATP7AQ04656 1500 aa15.31■□□□□ 0.04
PDXDC1-202ENST00000396410 CD109Q6YHK3 1445 aa15.3■□□□□ 0.04
PDXDC1-202ENST00000396410 COL17A1Q9UMD9 1497 aaPredicted RBP15.29■□□□□ 0.04
PDXDC1-202ENST00000396410 STAG3Q9UJ98 1225 aa15.29■□□□□ 0.04
PDXDC1-202ENST00000396410 TRPM1Q7Z4N2 1603 aa15.28■□□□□ 0.04
PDXDC1-202ENST00000396410 TRAK1Q9UPV9 953 aa15.28■□□□□ 0.04
PDXDC1-202ENST00000396410 PARD3Q8TEW0 1356 aa15.27■□□□□ 0.04
PDXDC1-202ENST00000396410 PER1O15534 1290 aaPredicted RBP15.27■□□□□ 0.04
PDXDC1-202ENST00000396410 NUTM2DQ5VT03 806 aaPredicted RBP15.27■□□□□ 0.04
PDXDC1-202ENST00000396410 ZFYVE16Q7Z3T8 1539 aa15.27■□□□□ 0.03
PDXDC1-202ENST00000396410 ATP10AO60312 1499 aa15.27■□□□□ 0.03
PDXDC1-202ENST00000396410 SCAF11Q99590 1463 aaKnown RBP15.26■□□□□ 0.03
PDXDC1-202ENST00000396410 ANP32EQ9BTT0 268 aa15.25■□□□□ 0.03
PDXDC1-202ENST00000396410 RRP1P56182 461 aaKnown RBP15.25■□□□□ 0.03
PDXDC1-202ENST00000396410 ARAP3Q8WWN8 1544 aa15.25■□□□□ 0.03
PDXDC1-202ENST00000396410 RAPGEF3O95398 923 aa15.25■□□□□ 0.03
PDXDC1-202ENST00000396410 TNNT2P45379 298 aaPredicted RBP15.25■□□□□ 0.03
PDXDC1-202ENST00000396410 ADGRF5Q8IZF2 1346 aa15.25■□□□□ 0.03
PDXDC1-202ENST00000396410 PPP2R1AP30153 589 aa15.24■□□□□ 0.03
PDXDC1-202ENST00000396410 ZNF518AQ6AHZ1 1483 aa15.24■□□□□ 0.03
PDXDC1-202ENST00000396410 MAGI2Q86UL8 1455 aa15.23■□□□□ 0.03
PDXDC1-202ENST00000396410 CYB5RLQ6IPT4 315 aa15.23■□□□□ 0.03
PDXDC1-202ENST00000396410 CDCA7LQ96GN5 454 aa15.23■□□□□ 0.03
PDXDC1-202ENST00000396410 ADAMTS8Q9UP79 889 aa15.23■□□□□ 0.03
PDXDC1-202ENST00000396410 PRDM15P57071 1507 aaPredicted RBP15.23■□□□□ 0.03
PDXDC1-202ENST00000396410 LRPPRCP42704 1394 aaKnown RBP15.22■□□□□ 0.03
PDXDC1-202ENST00000396410 CENPJQ9HC77 1338 aaPredicted RBP15.22■□□□□ 0.03
PDXDC1-202ENST00000396410 TRPM2O94759 1503 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms