RNA–Protein interactions for RNA: ENST00000394221.2

DHFR2-202, Transcript of dihydrofolate reductase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DHFR2, Length 4,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DHFR2-202ENST00000394221 PDE3BQ13370 1112 aa10.73□□□□□ -0.69
DHFR2-202ENST00000394221 AEBP1Q8IUX7 1158 aa10.73□□□□□ -0.69
DHFR2-202ENST00000394221 ERCC6Q03468 1493 aa10.73□□□□□ -0.69
DHFR2-202ENST00000394221 RAPGEF2Q9Y4G8 1499 aa10.73□□□□□ -0.69
DHFR2-202ENST00000394221 PHLDB1Q86UU1 1377 aa10.73□□□□□ -0.69
DHFR2-202ENST00000394221 ZBTB22O15209 634 aa10.73□□□□□ -0.69
DHFR2-202ENST00000394221 ANTXR1Q9H6X2 564 aa10.73□□□□□ -0.69
DHFR2-202ENST00000394221 CHRM1P11229 460 aaPredicted RBP10.72□□□□□ -0.69
DHFR2-202ENST00000394221 RGS22Q8NE09 1264 aa10.72□□□□□ -0.69
DHFR2-202ENST00000394221 APPP05067 770 aa10.71□□□□□ -0.69
DHFR2-202ENST00000394221 WIZO95785 1651 aa10.71□□□□□ -0.69
DHFR2-202ENST00000394221 KCNJ4P48050 445 aa10.71□□□□□ -0.69
DHFR2-202ENST00000394221 PPP1R9BQ96SB3 815 aa10.7□□□□□ -0.7
DHFR2-202ENST00000394221 SKOR2Q2VWA4 1001 aaPredicted RBP10.7□□□□□ -0.7
DHFR2-202ENST00000394221 PNISRQ8TF01 805 aaKnown RBP10.7□□□□□ -0.7
DHFR2-202ENST00000394221 BCCIPQ9P287 314 aaKnown RBP eCLIP10.7□□□□□ -0.7
DHFR2-202ENST00000394221 KDM2BQ8NHM5 1336 aa10.7□□□□□ -0.7
DHFR2-202ENST00000394221 MAP3K1Q13233 1512 aa10.69□□□□□ -0.7
DHFR2-202ENST00000394221 PTMSP20962 102 aa10.69□□□□□ -0.7
DHFR2-202ENST00000394221 NCOA1Q15788 1441 aa10.69□□□□□ -0.7
DHFR2-202ENST00000394221 ARAP1Q96P48 1450 aa10.68□□□□□ -0.7
DHFR2-202ENST00000394221 CCDC66A2RUB6 948 aa10.68□□□□□ -0.7
DHFR2-202ENST00000394221 ZNF500O60304 480 aaPredicted RBP10.68□□□□□ -0.7
DHFR2-202ENST00000394221 GBP4Q96PP9 640 aa10.68□□□□□ -0.7
DHFR2-202ENST00000394221 TBC1D2Q9BYX2 928 aa10.68□□□□□ -0.7
DHFR2-202ENST00000394221 HS1BP3Q53T59 392 aa10.68□□□□□ -0.7
DHFR2-202ENST00000394221 CERS3Q8IU89 383 aa10.68□□□□□ -0.7
DHFR2-202ENST00000394221 ATP1B4Q9UN42 357 aaPredicted RBP10.68□□□□□ -0.7
DHFR2-202ENST00000394221 IRX5P78411 483 aaPredicted RBP10.67□□□□□ -0.7
DHFR2-202ENST00000394221 GAS2L3Q86XJ1 694 aa10.67□□□□□ -0.7
DHFR2-202ENST00000394221 BICRAQ9NZM4 1560 aa10.67□□□□□ -0.7
DHFR2-202ENST00000394221 NBPF1Q3BBV0 1214 aa10.67□□□□□ -0.7
DHFR2-202ENST00000394221 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.67□□□□□ -0.7
DHFR2-202ENST00000394221 BAZ1AQ9NRL2 1556 aaPredicted RBP10.67□□□□□ -0.7
DHFR2-202ENST00000394221 KIF7Q2M1P5 1343 aa10.66□□□□□ -0.7
DHFR2-202ENST00000394221 NOL7Q9UMY1 257 aaKnown RBP10.66□□□□□ -0.7
DHFR2-202ENST00000394221 IGSF3O75054 1194 aa10.66□□□□□ -0.7
DHFR2-202ENST00000394221 SAMD1Q6SPF0 538 aaPredicted RBP10.66□□□□□ -0.7
DHFR2-202ENST00000394221 CLGNO14967 610 aa10.65□□□□□ -0.7
DHFR2-202ENST00000394221 HDAC5Q9UQL6 1122 aa10.65□□□□□ -0.7
DHFR2-202ENST00000394221 RNF216Q9NWF9 866 aaPredicted RBP10.65□□□□□ -0.71
DHFR2-202ENST00000394221 SPDYE4A6NLX3 237 aa10.64□□□□□ -0.71
DHFR2-202ENST00000394221 GOLGA6L22H0YM25 854 aa10.64□□□□□ -0.71
DHFR2-202ENST00000394221 USP19O94966 1318 aa10.64□□□□□ -0.71
DHFR2-202ENST00000394221 MCM5P33992 734 aa10.64□□□□□ -0.71
DHFR2-202ENST00000394221 WWC1Q8IX03 1113 aa10.64□□□□□ -0.71
DHFR2-202ENST00000394221 HMGN5P82970 282 aaKnown RBP10.63□□□□□ -0.71
DHFR2-202ENST00000394221 HSCBQ8IWL3 235 aa10.63□□□□□ -0.71
DHFR2-202ENST00000394221 CNPY4Q8N129 248 aa10.63□□□□□ -0.71
DHFR2-202ENST00000394221 TIGD1Q96MW7 591 aa10.63□□□□□ -0.71
DHFR2-202ENST00000394221 PTMAP06454 111 aaKnown RBP10.63□□□□□ -0.71
DHFR2-202ENST00000394221 HOMEZQ8IX15 550 aa10.63□□□□□ -0.71
DHFR2-202ENST00000394221 ZKSCAN5Q9Y2L8 839 aa10.63□□□□□ -0.71
DHFR2-202ENST00000394221 ZBTB7CA1YPR0 619 aa10.62□□□□□ -0.71
DHFR2-202ENST00000394221 TNNT3P45378 269 aaPredicted RBP10.62□□□□□ -0.71
DHFR2-202ENST00000394221 SLC20A2Q08357 652 aa10.62□□□□□ -0.71
DHFR2-202ENST00000394221 MAPK8IP3Q9UPT6 1336 aa10.62□□□□□ -0.71
DHFR2-202ENST00000394221 ATP2B3Q16720 1220 aa10.62□□□□□ -0.71
DHFR2-202ENST00000394221 PDCL2Q8N4E4 241 aa10.62□□□□□ -0.71
DHFR2-202ENST00000394221 MYRIPQ8NFW9 859 aa10.62□□□□□ -0.71
DHFR2-202ENST00000394221 CDCA7LQ96GN5 454 aa10.62□□□□□ -0.71
DHFR2-202ENST00000394221 TSPYL1Q9H0U9 437 aa10.62□□□□□ -0.71
DHFR2-202ENST00000394221 C20orf194Q5TEA3 1177 aa10.62□□□□□ -0.71
DHFR2-202ENST00000394221 TRIM6-TRIM34B2RNG4 842 aa10.61□□□□□ -0.71
DHFR2-202ENST00000394221 SEC24BO95487 1268 aa10.61□□□□□ -0.71
DHFR2-202ENST00000394221 TRIM34Q9BYJ4 488 aa10.61□□□□□ -0.71
DHFR2-202ENST00000394221 PANK3Q9H999 370 aa10.61□□□□□ -0.71
DHFR2-202ENST00000394221 CCDC39Q9UFE4 941 aa10.61□□□□□ -0.71
DHFR2-202ENST00000394221 KIF3AQ9Y496 699 aa10.61□□□□□ -0.71
DHFR2-202ENST00000394221 ATAD2BQ9ULI0 1458 aa10.61□□□□□ -0.71
DHFR2-202ENST00000394221 P3H3Q8IVL6 736 aa10.61□□□□□ -0.71
DHFR2-202ENST00000394221 CC2D2AQ9P2K1 1620 aa10.61□□□□□ -0.71
DHFR2-202ENST00000394221 PRIMPOLQ96LW4 560 aa10.6□□□□□ -0.71
DHFR2-202ENST00000394221 SYNJ1O43426 1573 aa10.59□□□□□ -0.71
DHFR2-202ENST00000394221 KIAA2012Q0VF49 1180 aa10.59□□□□□ -0.71
DHFR2-202ENST00000394221 AXDND1Q5T1B0 1012 aaPredicted RBP10.59□□□□□ -0.71
DHFR2-202ENST00000394221 TBC1D32Q96NH3 1257 aa10.59□□□□□ -0.71
DHFR2-202ENST00000394221 UACAQ9BZF9 1416 aa10.59□□□□□ -0.71
DHFR2-202ENST00000394221 CCDC18Q5T9S5 1454 aa10.59□□□□□ -0.71
DHFR2-202ENST00000394221 PATL2C9JE40 543 aaKnown RBP10.58□□□□□ -0.72
DHFR2-202ENST00000394221 TSC1Q92574 1164 aa10.58□□□□□ -0.72
DHFR2-202ENST00000394221 CALCOCO1Q9P1Z2 691 aa10.58□□□□□ -0.72
DHFR2-202ENST00000394221 DDX49Q9Y6V7 483 aaKnown RBP10.58□□□□□ -0.72
DHFR2-202ENST00000394221 BRD4O60885 1362 aaPredicted RBP10.57□□□□□ -0.72
DHFR2-202ENST00000394221 FAM193AP78312 1265 aa10.57□□□□□ -0.72
DHFR2-202ENST00000394221 GABPB1Q06547 395 aaPredicted RBP10.57□□□□□ -0.72
DHFR2-202ENST00000394221 ZNF622Q969S3 477 aaKnown RBP eCLIP10.57□□□□□ -0.72
DHFR2-202ENST00000394221 MYOM3Q5VTT5 1437 aa10.56□□□□□ -0.72
DHFR2-202ENST00000394221 LRPPRCP42704 1394 aaKnown RBP10.56□□□□□ -0.72
DHFR2-202ENST00000394221 MYBBP1AQ9BQG0 1328 aaKnown RBP10.56□□□□□ -0.72
DHFR2-202ENST00000394221 HSP90B1P14625 803 aaKnown RBP10.56□□□□□ -0.72
DHFR2-202ENST00000394221 TNPO1Q92973 898 aaKnown RBP10.56□□□□□ -0.72
DHFR2-202ENST00000394221 MYCNP04198 464 aaPredicted RBP10.55□□□□□ -0.72
DHFR2-202ENST00000394221 HSP90AB1P08238 724 aaKnown RBP10.55□□□□□ -0.72
DHFR2-202ENST00000394221 RBM25P49756 843 aaKnown RBP10.55□□□□□ -0.72
DHFR2-202ENST00000394221 CC2D1BQ5T0F9 858 aaKnown RBP10.55□□□□□ -0.72
DHFR2-202ENST00000394221 ZNF710Q8N1W2 664 aa10.55□□□□□ -0.72
DHFR2-202ENST00000394221 DHX29Q7Z478 1369 aaKnown RBP10.55□□□□□ -0.72
DHFR2-202ENST00000394221 ZBTB9Q96C00 473 aa10.55□□□□□ -0.72
DHFR2-202ENST00000394221 CHAF1AQ13111 956 aaPredicted RBP10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms