RNA–Protein interactions for RNA: ENST00000390882.1

RNU6-440P-201, Transcript of RNA, U6 small nuclear 440, pseudogene, humanhuman

BASIC

Gene RNU6-440P, Length 105 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-440P-201ENST00000390882 TJAP1Q5JTD0 557 aa5.04□□□□□ -1.6
RNU6-440P-201ENST00000390882 GPHNQ9NQX3 736 aaPredicted RBP5.04□□□□□ -1.6
RNU6-440P-201ENST00000390882 TAOK2Q9UL54 1235 aa5.04□□□□□ -1.6
RNU6-440P-201ENST00000390882 STK24Q9Y6E0 443 aa5.04□□□□□ -1.6
RNU6-440P-201ENST00000390882 PPP1R3GB7ZBB8 358 aa5.03□□□□□ -1.6
RNU6-440P-201ENST00000390882 OXER1Q8TDS5 423 aa5.03□□□□□ -1.6
RNU6-440P-201ENST00000390882 JPH4Q96JJ6 628 aa5.03□□□□□ -1.6
RNU6-440P-201ENST00000390882 ADAM33Q9BZ11 813 aa5.03□□□□□ -1.6
RNU6-440P-201ENST00000390882 HPS5Q9UPZ3 1129 aa5.03□□□□□ -1.6
RNU6-440P-201ENST00000390882 DSG2Q14126 1118 aa5.02□□□□□ -1.61
RNU6-440P-201ENST00000390882 PROX2Q3B8N5 592 aa5.02□□□□□ -1.61
RNU6-440P-201ENST00000390882 CDKN2AIPQ9NXV6 580 aaPredicted RBP5.02□□□□□ -1.61
RNU6-440P-201ENST00000390882 ANO8Q9HCE9 1232 aaPredicted RBP5.01□□□□□ -1.61
RNU6-440P-201ENST00000390882 ONECUT3O60422 494 aaPredicted RBP5□□□□□ -1.61
RNU6-440P-201ENST00000390882 LRCH3Q96II8 777 aa5□□□□□ -1.61
RNU6-440P-201ENST00000390882 IL21Q9HBE4 155 aa5□□□□□ -1.61
RNU6-440P-201ENST00000390882 KIAA1468Q9P260 1216 aa5□□□□□ -1.61
RNU6-440P-201ENST00000390882 FAM181BA6NEQ2 426 aa4.99□□□□□ -1.61
RNU6-440P-201ENST00000390882 TRIM67Q6ZTA4 783 aa4.99□□□□□ -1.61
RNU6-440P-201ENST00000390882 UPF1Q92900 1129 aaKnown RBP eCLIP4.99□□□□□ -1.61
RNU6-440P-201ENST00000390882 PPP1R37O75864 691 aa4.98□□□□□ -1.61
RNU6-440P-201ENST00000390882 PPP4CP60510 307 aa4.98□□□□□ -1.61
RNU6-440P-201ENST00000390882 NFX1Q12986 1120 aaKnown RBP4.98□□□□□ -1.61
RNU6-440P-201ENST00000390882 GGCXP38435 758 aa4.97□□□□□ -1.61
RNU6-440P-201ENST00000390882 FAM98CQ17RN3 349 aaKnown RBP4.97□□□□□ -1.61
RNU6-440P-201ENST00000390882 MTRQ99707 1265 aa4.97□□□□□ -1.61
RNU6-440P-201ENST00000390882 COL9A1P20849 921 aa4.96□□□□□ -1.62
RNU6-440P-201ENST00000390882 PRR20EP86478 221 aa4.96□□□□□ -1.62
RNU6-440P-201ENST00000390882 PRR20CP86479 221 aa4.96□□□□□ -1.62
RNU6-440P-201ENST00000390882 PRR20DP86480 221 aa4.96□□□□□ -1.62
RNU6-440P-201ENST00000390882 PRR20BP86481 221 aa4.96□□□□□ -1.62
RNU6-440P-201ENST00000390882 PRR20AP86496 221 aa4.96□□□□□ -1.62
RNU6-440P-201ENST00000390882 TMUB1Q9BVT8 246 aa4.96□□□□□ -1.62
RNU6-440P-201ENST00000390882 STK25O00506 426 aa4.95□□□□□ -1.62
RNU6-440P-201ENST00000390882 AAASQ9NRG9 546 aa4.95□□□□□ -1.62
RNU6-440P-201ENST00000390882 SEPT9Q9UHD8 586 aaPredicted RBP4.95□□□□□ -1.62
RNU6-440P-201ENST00000390882 FAM187AA6NFU0 413 aa4.94□□□□□ -1.62
RNU6-440P-201ENST00000390882 ZNF516Q92618 1163 aa4.94□□□□□ -1.62
RNU6-440P-201ENST00000390882 ST8SIA5O15466 376 aa4.93□□□□□ -1.62
RNU6-440P-201ENST00000390882 EVI5O60447 810 aa4.93□□□□□ -1.62
RNU6-440P-201ENST00000390882 SLC19A1P41440 591 aa4.93□□□□□ -1.62
RNU6-440P-201ENST00000390882 ZNF598Q86UK7 904 aaKnown RBP4.92□□□□□ -1.62
RNU6-440P-201ENST00000390882 C11orf95C9JLR9 678 aaPredicted RBP4.91□□□□□ -1.62
RNU6-440P-201ENST00000390882 SPRYD7Q5W111 196 aa4.9□□□□□ -1.63
RNU6-440P-201ENST00000390882 NKX2-3Q8TAU0 364 aa4.9□□□□□ -1.63
RNU6-440P-201ENST00000390882 TRIM6-TRIM34B2RNG4 842 aa4.89□□□□□ -1.63
RNU6-440P-201ENST00000390882 FBXW7Q969H0 707 aa4.89□□□□□ -1.63
RNU6-440P-201ENST00000390882 PCDHGA10Q9Y5H3 936 aa4.89□□□□□ -1.63
RNU6-440P-201ENST00000390882 CRIPAKQ8N1N5 446 aa4.88□□□□□ -1.63
RNU6-440P-201ENST00000390882 GMPR2Q9P2T1 348 aaKnown RBP4.88□□□□□ -1.63
RNU6-440P-201ENST00000390882 TERTO14746 1132 aaKnown RBP4.87□□□□□ -1.63
RNU6-440P-201ENST00000390882 GDF9O60383 454 aa4.87□□□□□ -1.63
RNU6-440P-201ENST00000390882 LCE2CQ5TA81 110 aa4.86□□□□□ -1.63
RNU6-440P-201ENST00000390882 TYW1BQ6NUM6 668 aa4.86□□□□□ -1.63
RNU6-440P-201ENST00000390882 EMID1Q96A84 441 aaPredicted RBP4.86□□□□□ -1.63
RNU6-440P-201ENST00000390882 DACH1Q9UI36 760 aa4.86□□□□□ -1.63
RNU6-440P-201ENST00000390882 TNFRSF10AO00220 468 aa4.85□□□□□ -1.63
RNU6-440P-201ENST00000390882 PPP1R15BQ5SWA1 713 aa4.85□□□□□ -1.63
RNU6-440P-201ENST00000390882 ZNF697Q5TEC3 545 aa4.85□□□□□ -1.63
RNU6-440P-201ENST00000390882 ZSCAN1Q8NBB4 408 aa4.85□□□□□ -1.63
RNU6-440P-201ENST00000390882 PHF14O94880 888 aa4.84□□□□□ -1.63
RNU6-440P-201ENST00000390882 MAP3K9P80192 1104 aa4.84□□□□□ -1.63
RNU6-440P-201ENST00000390882 C6orf132Q5T0Z8 1188 aa4.84□□□□□ -1.63
RNU6-440P-201ENST00000390882 SAMD7Q7Z3H4 446 aa4.84□□□□□ -1.63
RNU6-440P-201ENST00000390882 PACS2Q86VP3 889 aa4.84□□□□□ -1.63
RNU6-440P-201ENST00000390882 RNF223E7ERA6 249 aa4.83□□□□□ -1.64
RNU6-440P-201ENST00000390882 AXIN1O15169 862 aa4.82□□□□□ -1.64
RNU6-440P-201ENST00000390882 AVPP01185 164 aa4.82□□□□□ -1.64
RNU6-440P-201ENST00000390882 LORP23490 312 aaPredicted RBP4.81□□□□□ -1.64
RNU6-440P-201ENST00000390882 APLP1P51693 650 aa4.81□□□□□ -1.64
RNU6-440P-201ENST00000390882 CTC1Q2NKJ3 1217 aa4.81□□□□□ -1.64
RNU6-440P-201ENST00000390882 ANKLE1Q8NAG6 615 aa4.81□□□□□ -1.64
RNU6-440P-201ENST00000390882 ZPR1O75312 459 aa4.8□□□□□ -1.64
RNU6-440P-201ENST00000390882 COPS2P61201 443 aa4.8□□□□□ -1.64
RNU6-440P-201ENST00000390882 LIAT1Q6ZQX7 453 aa4.8□□□□□ -1.64
RNU6-440P-201ENST00000390882 CRISPLD2Q9H0B8 497 aa4.8□□□□□ -1.64
RNU6-440P-201ENST00000390882 LMOD2Q6P5Q4 547 aa4.79□□□□□ -1.64
RNU6-440P-201ENST00000390882 KCTD17Q8N5Z5 321 aa4.79□□□□□ -1.64
RNU6-440P-201ENST00000390882 SLC16A10Q8TF71 515 aa4.79□□□□□ -1.64
RNU6-440P-201ENST00000390882 EPAS1Q99814 870 aa4.79□□□□□ -1.64
RNU6-440P-201ENST00000390882 SMCPP49901 116 aaPredicted RBP4.78□□□□□ -1.64
RNU6-440P-201ENST00000390882 HDGFP51858 240 aaKnown RBP4.78□□□□□ -1.64
RNU6-440P-201ENST00000390882 NECTIN2Q92692 538 aa4.78□□□□□ -1.64
RNU6-440P-201ENST00000390882 TSKSQ9UJT2 592 aa4.78□□□□□ -1.64
RNU6-440P-201ENST00000390882 XP32Q5T750 250 aa4.77□□□□□ -1.65
RNU6-440P-201ENST00000390882 KRTAP4-8Q9BYQ9 185 aa4.77□□□□□ -1.65
RNU6-440P-201ENST00000390882 SNRPBP14678 240 aaKnown RBP4.76□□□□□ -1.65
RNU6-440P-201ENST00000390882 PDE4AP27815 886 aa4.76□□□□□ -1.65
RNU6-440P-201ENST00000390882 KCNMA1Q12791 1236 aa4.76□□□□□ -1.65
RNU6-440P-201ENST00000390882 RNF40O75150 1001 aa4.75□□□□□ -1.65
RNU6-440P-201ENST00000390882 GMPRP36959 345 aa4.75□□□□□ -1.65
RNU6-440P-201ENST00000390882 SENP2Q9HC62 589 aa4.75□□□□□ -1.65
RNU6-440P-201ENST00000390882 PKD2L1Q9P0L9 805 aa4.75□□□□□ -1.65
RNU6-440P-201ENST00000390882 SMAPO00193 183 aa4.74□□□□□ -1.65
RNU6-440P-201ENST00000390882 FOXC1Q12948 553 aa4.74□□□□□ -1.65
RNU6-440P-201ENST00000390882 PPEF1O14829 653 aaPredicted RBP4.73□□□□□ -1.65
RNU6-440P-201ENST00000390882 IRF7Q92985 503 aa4.73□□□□□ -1.65
RNU6-440P-201ENST00000390882 TRIM47Q96LD4 638 aa4.73□□□□□ -1.65
RNU6-440P-201ENST00000390882 TOR4AQ9NXH8 423 aa4.73□□□□□ -1.65
RNU6-440P-201ENST00000390882 TMEM151AQ8N4L1 468 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms