RNA–Protein interactions for RNA: ENST00000389138.7

ERCC4-202, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 2,106 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-202ENST00000389138 CFTRP13569 1480 aa8.71□□□□□ -1.01
ERCC4-202ENST00000389138 POTEFA5A3E0 1075 aa8.71□□□□□ -1.01
ERCC4-202ENST00000389138 RSF1Q96T23 1441 aaPredicted RBP8.71□□□□□ -1.02
ERCC4-202ENST00000389138 AEBP1Q8IUX7 1158 aa8.71□□□□□ -1.02
ERCC4-202ENST00000389138 BOLA1Q9Y3E2 137 aa8.71□□□□□ -1.02
ERCC4-202ENST00000389138 IFT140Q96RY7 1462 aa8.7□□□□□ -1.02
ERCC4-202ENST00000389138 BRD2P25440 801 aaKnown RBP8.7□□□□□ -1.02
ERCC4-202ENST00000389138 DPY19L2Q6NUT2 758 aa8.7□□□□□ -1.02
ERCC4-202ENST00000389138 UBE2Q2Q8WVN8 375 aa8.69□□□□□ -1.02
ERCC4-202ENST00000389138 TRAIPQ9BWF2 469 aa8.69□□□□□ -1.02
ERCC4-202ENST00000389138 MFAP1P55081 439 aaKnown RBP8.68□□□□□ -1.02
ERCC4-202ENST00000389138 TMEM121BQ9BXQ6 578 aaPredicted RBP8.68□□□□□ -1.02
ERCC4-202ENST00000389138 MICALL2Q8IY33 904 aa8.68□□□□□ -1.02
ERCC4-202ENST00000389138 TMCO4Q5TGY1 634 aa8.66□□□□□ -1.02
ERCC4-202ENST00000389138 ZMYND10O75800 440 aa8.64□□□□□ -1.03
ERCC4-202ENST00000389138 CLASP1Q7Z460 1538 aa8.63□□□□□ -1.03
ERCC4-202ENST00000389138 MAMSTRQ6ZN01 415 aa8.63□□□□□ -1.03
ERCC4-202ENST00000389138 PDE4AP27815 886 aa8.62□□□□□ -1.03
ERCC4-202ENST00000389138 C3orf67Q6ZVT6 689 aa8.62□□□□□ -1.03
ERCC4-202ENST00000389138 GZF1Q9H116 711 aaPredicted RBP8.62□□□□□ -1.03
ERCC4-202ENST00000389138 TARBP1Q13395 1621 aaKnown RBP8.62□□□□□ -1.03
ERCC4-202ENST00000389138 TOPBP1Q92547 1522 aa8.6□□□□□ -1.03
ERCC4-202ENST00000389138 CADPS2Q86UW7 1296 aa8.6□□□□□ -1.03
ERCC4-202ENST00000389138 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.6□□□□□ -1.03
ERCC4-202ENST00000389138 FAM177A1Q8N128 213 aaPredicted RBP8.59□□□□□ -1.03
ERCC4-202ENST00000389138 WDR70Q9NW82 654 aa8.59□□□□□ -1.03
ERCC4-202ENST00000389138 USP35Q9P2H5 1018 aa8.59□□□□□ -1.03
ERCC4-202ENST00000389138 E9PSI1 815 aa8.59□□□□□ -1.03
ERCC4-202ENST00000389138 TMC2Q8TDI7 906 aa8.58□□□□□ -1.04
ERCC4-202ENST00000389138 CRISPLD2Q9H0B8 497 aa8.58□□□□□ -1.04
ERCC4-202ENST00000389138 POLR3GLQ9BT43 218 aa8.57□□□□□ -1.04
ERCC4-202ENST00000389138 SCUBE2Q9NQ36 999 aa8.57□□□□□ -1.04
ERCC4-202ENST00000389138 DNMBPQ6XZF7 1577 aa8.57□□□□□ -1.04
ERCC4-202ENST00000389138 KIF13AQ9H1H9 1805 aa8.57□□□□□ -1.04
ERCC4-202ENST00000389138 GPHNQ9NQX3 736 aaPredicted RBP8.57□□□□□ -1.04
ERCC4-202ENST00000389138 SYNJ1O43426 1573 aa8.56□□□□□ -1.04
ERCC4-202ENST00000389138 AQRO60306 1485 aaKnown RBP eCLIP8.56□□□□□ -1.04
ERCC4-202ENST00000389138 KDM4CQ9H3R0 1056 aa8.56□□□□□ -1.04
ERCC4-202ENST00000389138 TOP2AP11388 1531 aaKnown RBP8.56□□□□□ -1.04
ERCC4-202ENST00000389138 POTEB2H3BUK9 544 aa8.56□□□□□ -1.04
ERCC4-202ENST00000389138 MFSD10Q14728 455 aa8.56□□□□□ -1.04
ERCC4-202ENST00000389138 FAM9AQ8IZU1 332 aaPredicted RBP8.56□□□□□ -1.04
ERCC4-202ENST00000389138 CLUAP1Q96AJ1 413 aa8.56□□□□□ -1.04
ERCC4-202ENST00000389138 NCKAP5LQ9HCH0 1330 aa8.55□□□□□ -1.04
ERCC4-202ENST00000389138 ABCC8Q09428 1581 aa8.55□□□□□ -1.04
ERCC4-202ENST00000389138 SEMA3EO15041 775 aa8.54□□□□□ -1.04
ERCC4-202ENST00000389138 TRAK2O60296 914 aa8.54□□□□□ -1.04
ERCC4-202ENST00000389138 LARP6Q9BRS8 491 aaKnown RBP8.54□□□□□ -1.04
ERCC4-202ENST00000389138 KIF3CO14782 793 aa8.53□□□□□ -1.04
ERCC4-202ENST00000389138 POTEJP0CG39 1038 aa8.53□□□□□ -1.04
ERCC4-202ENST00000389138 IRF5Q13568 498 aa8.53□□□□□ -1.04
ERCC4-202ENST00000389138 DDX27Q96GQ7 796 aaKnown RBP8.53□□□□□ -1.04
ERCC4-202ENST00000389138 ONECUT3O60422 494 aaPredicted RBP8.52□□□□□ -1.05
ERCC4-202ENST00000389138 WDR97A6NE52 1622 aa8.52□□□□□ -1.05
ERCC4-202ENST00000389138 C2orf72A6NCS6 295 aa8.51□□□□□ -1.05
ERCC4-202ENST00000389138 FOXK1P85037 733 aa8.51□□□□□ -1.05
ERCC4-202ENST00000389138 GAPVD1Q14C86 1478 aa8.51□□□□□ -1.05
ERCC4-202ENST00000389138 PPP1R15BQ5SWA1 713 aa8.5□□□□□ -1.05
ERCC4-202ENST00000389138 TMEM92Q6UXU6 159 aa8.5□□□□□ -1.05
ERCC4-202ENST00000389138 RETREG2Q8NC44 543 aa8.5□□□□□ -1.05
ERCC4-202ENST00000389138 SNAPC4Q5SXM2 1469 aa8.5□□□□□ -1.05
ERCC4-202ENST00000389138 BARGINQ6ZT62 677 aa8.5□□□□□ -1.05
ERCC4-202ENST00000389138 TESPA1A2RU30 521 aaPredicted RBP8.49□□□□□ -1.05
ERCC4-202ENST00000389138 PDE4CQ08493 712 aa8.48□□□□□ -1.05
ERCC4-202ENST00000389138 POLA1P09884 1462 aaPredicted RBP8.48□□□□□ -1.05
ERCC4-202ENST00000389138 SLAIN1Q8ND83 568 aa8.48□□□□□ -1.05
ERCC4-202ENST00000389138 DSG2Q14126 1118 aa8.47□□□□□ -1.05
ERCC4-202ENST00000389138 RSPH4AQ5TD94 716 aa8.47□□□□□ -1.05
ERCC4-202ENST00000389138 MAGI1Q96QZ7 1491 aaPredicted RBP8.47□□□□□ -1.05
ERCC4-202ENST00000389138 A6NJR5 290 aa8.47□□□□□ -1.05
ERCC4-202ENST00000389138 E2F4Q16254 413 aa8.47□□□□□ -1.05
ERCC4-202ENST00000389138 PLPP6Q8IY26 295 aa8.47□□□□□ -1.05
ERCC4-202ENST00000389138 PBRM1Q86U86 1689 aa8.46□□□□□ -1.05
ERCC4-202ENST00000389138 FLIIQ13045 1269 aa8.46□□□□□ -1.06
ERCC4-202ENST00000389138 FAM117AQ9C073 453 aa8.46□□□□□ -1.06
ERCC4-202ENST00000389138 TAF7LQ5H9L4 462 aa8.45□□□□□ -1.06
ERCC4-202ENST00000389138 CAMK2BQ13554 666 aa8.45□□□□□ -1.06
ERCC4-202ENST00000389138 AK7Q96M32 723 aa8.45□□□□□ -1.06
ERCC4-202ENST00000389138 CWC22Q9HCG8 908 aaKnown RBP8.45□□□□□ -1.06
ERCC4-202ENST00000389138 PLSCR2Q9NRY7 297 aa8.45□□□□□ -1.06
ERCC4-202ENST00000389138 FBXW7Q969H0 707 aa8.44□□□□□ -1.06
ERCC4-202ENST00000389138 OTUD5Q96G74 571 aa8.44□□□□□ -1.06
ERCC4-202ENST00000389138 ZNF777Q9ULD5 760 aaPredicted RBP8.44□□□□□ -1.06
ERCC4-202ENST00000389138 SYNJ2O15056 1496 aa8.44□□□□□ -1.06
ERCC4-202ENST00000389138 ERCC6L2Q5T890 1561 aa8.44□□□□□ -1.06
ERCC4-202ENST00000389138 RAD54L2Q9Y4B4 1467 aa8.43□□□□□ -1.06
ERCC4-202ENST00000389138 SNPHO15079 494 aa8.43□□□□□ -1.06
ERCC4-202ENST00000389138 KDM4FA0A1W2PPD8 638 aa8.42□□□□□ -1.06
ERCC4-202ENST00000389138 ZNF316A6NFI3 1004 aaPredicted RBP8.42□□□□□ -1.06
ERCC4-202ENST00000389138 PPM1GO15355 546 aaPredicted RBP8.42□□□□□ -1.06
ERCC4-202ENST00000389138 ARIH1Q9Y4X5 557 aaPredicted RBP8.42□□□□□ -1.06
ERCC4-202ENST00000389138 CCDC88BA6NC98 1476 aa8.41□□□□□ -1.06
ERCC4-202ENST00000389138 TDRD9Q8NDG6 1382 aaKnown RBP8.41□□□□□ -1.06
ERCC4-202ENST00000389138 SLC34A2O95436 690 aa8.41□□□□□ -1.06
ERCC4-202ENST00000389138 ARHGEF1Q92888 912 aaKnown RBP8.41□□□□□ -1.06
ERCC4-202ENST00000389138 DOK7Q18PE1 504 aa8.41□□□□□ -1.06
ERCC4-202ENST00000389138 CHMP7Q8WUX9 453 aaPredicted RBP8.41□□□□□ -1.06
ERCC4-202ENST00000389138 KDM6BO15054 1643 aa8.4□□□□□ -1.06
ERCC4-202ENST00000389138 PLEKHG3A1L390 1219 aa8.4□□□□□ -1.06
ERCC4-202ENST00000389138 GRIN2BQ13224 1484 aa8.4□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms