RNA–Protein interactions for RNA: ENST00000381998.8

MSR1-204, Transcript of macrophage scavenger receptor 1, humanhuman

TSL 1 (best) BASIC

Gene MSR1, Length 2,826 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSR1-204ENST00000381998 GRIN2BQ13224 1484 aa8.42□□□□□ -1.06
MSR1-204ENST00000381998 KIF12Q96FN5 646 aa8.42□□□□□ -1.06
MSR1-204ENST00000381998 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP8.42□□□□□ -1.06
MSR1-204ENST00000381998 PSEN1P49768 467 aa8.42□□□□□ -1.06
MSR1-204ENST00000381998 CADPS2Q86UW7 1296 aa8.42□□□□□ -1.06
MSR1-204ENST00000381998 HIRIP3Q9BW71 556 aaPredicted RBP8.42□□□□□ -1.06
MSR1-204ENST00000381998 PPP1R15AO75807 674 aaPredicted RBP8.41□□□□□ -1.06
MSR1-204ENST00000381998 MFRPQ9BY79 579 aa8.4□□□□□ -1.06
MSR1-204ENST00000381998 MTUS2Q5JR59 1369 aa8.4□□□□□ -1.06
MSR1-204ENST00000381998 FGD6Q6ZV73 1430 aa8.4□□□□□ -1.06
MSR1-204ENST00000381998 PBRM1Q86U86 1689 aa8.4□□□□□ -1.06
MSR1-204ENST00000381998 LRRIQ1Q96JM4 1722 aa8.4□□□□□ -1.06
MSR1-204ENST00000381998 ZNF467Q7Z7K2 595 aaPredicted RBP8.4□□□□□ -1.06
MSR1-204ENST00000381998 BCL11AQ9H165 835 aa8.4□□□□□ -1.06
MSR1-204ENST00000381998 PPP1R37O75864 691 aa8.39□□□□□ -1.07
MSR1-204ENST00000381998 PDAP1Q13442 181 aaKnown RBP8.39□□□□□ -1.07
MSR1-204ENST00000381998 CABP2Q9NPB3 220 aa8.39□□□□□ -1.07
MSR1-204ENST00000381998 ADAMTS12P58397 1594 aa8.39□□□□□ -1.07
MSR1-204ENST00000381998 EFCAB3Q8N7B9 438 aa8.39□□□□□ -1.07
MSR1-204ENST00000381998 THOC2Q8NI27 1593 aaKnown RBP8.38□□□□□ -1.07
MSR1-204ENST00000381998 SGIP1Q9BQI5 828 aa8.38□□□□□ -1.07
MSR1-204ENST00000381998 ZNF608Q9ULD9 1512 aaPredicted RBP8.38□□□□□ -1.07
MSR1-204ENST00000381998 NCOA2Q15596 1464 aa8.38□□□□□ -1.07
MSR1-204ENST00000381998 EVX2Q03828 476 aa8.37□□□□□ -1.07
MSR1-204ENST00000381998 IQGAP2Q13576 1575 aa8.37□□□□□ -1.07
MSR1-204ENST00000381998 IFT140Q96RY7 1462 aa8.37□□□□□ -1.07
MSR1-204ENST00000381998 PDE4CQ08493 712 aa8.37□□□□□ -1.07
MSR1-204ENST00000381998 TRIM52Q96A61 297 aa8.37□□□□□ -1.07
MSR1-204ENST00000381998 PTPRKQ15262 1439 aa8.37□□□□□ -1.07
MSR1-204ENST00000381998 WDR62O43379 1518 aa8.37□□□□□ -1.07
MSR1-204ENST00000381998 NEUROD2Q15784 382 aa8.36□□□□□ -1.07
MSR1-204ENST00000381998 KCTD17Q8N5Z5 321 aa8.36□□□□□ -1.07
MSR1-204ENST00000381998 MAGI3Q5TCQ9 1506 aa8.36□□□□□ -1.07
MSR1-204ENST00000381998 MYOM3Q5VTT5 1437 aa8.36□□□□□ -1.07
MSR1-204ENST00000381998 EHBP1L1Q8N3D4 1523 aa8.35□□□□□ -1.07
MSR1-204ENST00000381998 PAK3O75914 559 aaPredicted RBP8.35□□□□□ -1.07
MSR1-204ENST00000381998 ANP32EQ9BTT0 268 aa8.35□□□□□ -1.07
MSR1-204ENST00000381998 TAF7LQ5H9L4 462 aa8.35□□□□□ -1.07
MSR1-204ENST00000381998 ZNF579Q8NAF0 562 aaKnown RBP8.35□□□□□ -1.07
MSR1-204ENST00000381998 PHF8Q9UPP1 1060 aa8.35□□□□□ -1.07
MSR1-204ENST00000381998 ARHGEF11O15085 1522 aa8.35□□□□□ -1.07
MSR1-204ENST00000381998 RAD21O60216 631 aa8.35□□□□□ -1.07
MSR1-204ENST00000381998 CCDC18Q5T9S5 1454 aa8.34□□□□□ -1.07
MSR1-204ENST00000381998 MS4A3Q96HJ5 214 aa8.34□□□□□ -1.07
MSR1-204ENST00000381998 SUPT6HQ7KZ85 1726 aaKnown RBP8.34□□□□□ -1.07
MSR1-204ENST00000381998 UGGT2Q9NYU1 1516 aa8.34□□□□□ -1.07
MSR1-204ENST00000381998 CCER2I3L3R5 266 aa8.34□□□□□ -1.07
MSR1-204ENST00000381998 ANP32CO43423 234 aa8.33□□□□□ -1.08
MSR1-204ENST00000381998 RGS22Q8NE09 1264 aa8.33□□□□□ -1.08
MSR1-204ENST00000381998 HFM1A2PYH4 1435 aa8.33□□□□□ -1.08
MSR1-204ENST00000381998 HECW1Q76N89 1606 aa8.33□□□□□ -1.08
MSR1-204ENST00000381998 EPRSP07814 1512 aaKnown RBP8.33□□□□□ -1.08
MSR1-204ENST00000381998 NAIPQ13075 1403 aa8.31□□□□□ -1.08
MSR1-204ENST00000381998 CDK13Q14004 1512 aaKnown RBP8.31□□□□□ -1.08
MSR1-204ENST00000381998 KIAA0586Q9BVV6 1533 aa8.31□□□□□ -1.08
MSR1-204ENST00000381998 TONSLQ96HA7 1378 aa8.31□□□□□ -1.08
MSR1-204ENST00000381998 PTPN23Q9H3S7 1636 aa8.31□□□□□ -1.08
MSR1-204ENST00000381998 NEFLP07196 543 aa8.31□□□□□ -1.08
MSR1-204ENST00000381998 TCOF1Q13428 1488 aaKnown RBP8.3□□□□□ -1.08
MSR1-204ENST00000381998 DISP1Q96F81 1524 aa8.3□□□□□ -1.08
MSR1-204ENST00000381998 EIF4G3O43432 1585 aaKnown RBP8.3□□□□□ -1.08
MSR1-204ENST00000381998 UACAQ9BZF9 1416 aa8.3□□□□□ -1.08
MSR1-204ENST00000381998 GRIN2AQ12879 1464 aa8.3□□□□□ -1.08
MSR1-204ENST00000381998 ARID3CA6NKF2 412 aa8.3□□□□□ -1.08
MSR1-204ENST00000381998 POLR3GLQ9BT43 218 aa8.3□□□□□ -1.08
MSR1-204ENST00000381998 RBM19Q9Y4C8 960 aaKnown RBP8.3□□□□□ -1.08
MSR1-204ENST00000381998 ERCC6Q03468 1493 aa8.29□□□□□ -1.08
MSR1-204ENST00000381998 FBXO22Q8NEZ5 403 aa8.29□□□□□ -1.08
MSR1-204ENST00000381998 KIAA0556O60303 1618 aa8.29□□□□□ -1.08
MSR1-204ENST00000381998 MS4A4AQ96JQ5 239 aa8.28□□□□□ -1.08
MSR1-204ENST00000381998 GALR2O43603 387 aaPredicted RBP8.28□□□□□ -1.08
MSR1-204ENST00000381998 LMOD2Q6P5Q4 547 aa8.28□□□□□ -1.08
MSR1-204ENST00000381998 KDM5BQ9UGL1 1544 aa8.28□□□□□ -1.08
MSR1-204ENST00000381998 TMEM106CQ9BVX2 250 aa8.27□□□□□ -1.09
MSR1-204ENST00000381998 MTMR7Q9Y216 660 aa8.27□□□□□ -1.09
MSR1-204ENST00000381998 RRP7BPQ9NSQ0 103 aa8.27□□□□□ -1.09
MSR1-204ENST00000381998 CHIC2Q9UKJ5 165 aa8.27□□□□□ -1.09
MSR1-204ENST00000381998 MIA2Q96PC5 1412 aa8.27□□□□□ -1.09
MSR1-204ENST00000381998 C19orf67A6NJJ6 358 aa8.26□□□□□ -1.09
MSR1-204ENST00000381998 NUP153P49790 1475 aaKnown RBP8.26□□□□□ -1.09
MSR1-204ENST00000381998 ZNF428Q96B54 188 aa8.26□□□□□ -1.09
MSR1-204ENST00000381998 MAGI1Q96QZ7 1491 aaPredicted RBP8.26□□□□□ -1.09
MSR1-204ENST00000381998 RBM25P49756 843 aaKnown RBP8.25□□□□□ -1.09
MSR1-204ENST00000381998 CHMP7Q8WUX9 453 aaPredicted RBP8.25□□□□□ -1.09
MSR1-204ENST00000381998 SYNJ2O15056 1496 aa8.25□□□□□ -1.09
MSR1-204ENST00000381998 APBB1O00213 710 aa8.25□□□□□ -1.09
MSR1-204ENST00000381998 KCNV2Q8TDN2 545 aa8.25□□□□□ -1.09
MSR1-204ENST00000381998 CEP170Q5SW79 1584 aa8.24□□□□□ -1.09
MSR1-204ENST00000381998 AKNAQ7Z591 1439 aa8.24□□□□□ -1.09
MSR1-204ENST00000381998 HAX1O00165 279 aa8.24□□□□□ -1.09
MSR1-204ENST00000381998 HNRNPUQ00839 825 aaKnown RBP eCLIP8.24□□□□□ -1.09
MSR1-204ENST00000381998 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.24□□□□□ -1.09
MSR1-204ENST00000381998 RAPGEF6Q8TEU7 1601 aa8.24□□□□□ -1.09
MSR1-204ENST00000381998 WASHC2AQ641Q2 1341 aa8.23□□□□□ -1.09
MSR1-204ENST00000381998 KDM6BO15054 1643 aa8.23□□□□□ -1.09
MSR1-204ENST00000381998 IRX6P78412 446 aaPredicted RBP8.23□□□□□ -1.09
MSR1-204ENST00000381998 DENND4BO75064 1496 aaPredicted RBP8.23□□□□□ -1.09
MSR1-204ENST00000381998 GCC2Q8IWJ2 1684 aa8.23□□□□□ -1.09
MSR1-204ENST00000381998 HSPA5P11021 654 aaKnown RBP8.22□□□□□ -1.09
MSR1-204ENST00000381998 NUP160Q12769 1436 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms