RNA–Protein interactions for RNA: ENST00000381867.5

SNPH-201, Transcript of syntaphilin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNPH, Length 5,533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNPH-201ENST00000381867 GBP4Q96PP9 640 aa17.73■□□□□ 0.43
SNPH-201ENST00000381867 IQGAP2Q13576 1575 aa17.72■□□□□ 0.43
SNPH-201ENST00000381867 ARAP1Q96P48 1450 aa17.72■□□□□ 0.43
SNPH-201ENST00000381867 ARHGAP5Q13017 1502 aa17.72■□□□□ 0.43
SNPH-201ENST00000381867 OS9Q13438 667 aaPredicted RBP17.72■□□□□ 0.43
SNPH-201ENST00000381867 BIVM-ERCC5R4GMW8 1640 aa17.72■□□□□ 0.43
SNPH-201ENST00000381867 TCERG1O14776 1098 aaKnown RBP17.72■□□□□ 0.43
SNPH-201ENST00000381867 SOX12O15370 315 aa17.72■□□□□ 0.43
SNPH-201ENST00000381867 DRC7Q8IY82 874 aa17.72■□□□□ 0.43
SNPH-201ENST00000381867 KIF15Q9NS87 1388 aa17.71■□□□□ 0.43
SNPH-201ENST00000381867 VGFO15240 615 aaPredicted RBP17.71■□□□□ 0.43
SNPH-201ENST00000381867 TROQ12816 1431 aaPredicted RBP17.71■□□□□ 0.43
SNPH-201ENST00000381867 RALBP1Q15311 655 aa17.7■□□□□ 0.42
SNPH-201ENST00000381867 L3MBTL2Q969R5 705 aa17.7■□□□□ 0.42
SNPH-201ENST00000381867 TULP1O00294 542 aaPredicted RBP17.7■□□□□ 0.42
SNPH-201ENST00000381867 TERF2IPQ9NYB0 399 aa17.69■□□□□ 0.42
SNPH-201ENST00000381867 STK26Q9P289 416 aa17.69■□□□□ 0.42
SNPH-201ENST00000381867 DHX57Q6P158 1386 aaKnown RBP17.69■□□□□ 0.42
SNPH-201ENST00000381867 KIAA2012Q0VF49 1180 aa17.68■□□□□ 0.42
SNPH-201ENST00000381867 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.68■□□□□ 0.42
SNPH-201ENST00000381867 URB2Q14146 1524 aaKnown RBP17.67■□□□□ 0.42
SNPH-201ENST00000381867 AMER1Q5JTC6 1135 aaPredicted RBP17.67■□□□□ 0.42
SNPH-201ENST00000381867 SAFB2Q14151 953 aaKnown RBP eCLIP17.66■□□□□ 0.42
SNPH-201ENST00000381867 NAP1L2Q9ULW6 460 aaPredicted RBP17.66■□□□□ 0.42
SNPH-201ENST00000381867 PHLDB1Q86UU1 1377 aa17.66■□□□□ 0.42
SNPH-201ENST00000381867 IPO9Q96P70 1041 aaKnown RBP17.66■□□□□ 0.42
SNPH-201ENST00000381867 GRIN2AQ12879 1464 aa17.66■□□□□ 0.42
SNPH-201ENST00000381867 TAOK2Q9UL54 1235 aa17.65■□□□□ 0.42
SNPH-201ENST00000381867 ANKRD50Q9ULJ7 1429 aa17.65■□□□□ 0.42
SNPH-201ENST00000381867 GOLGA2Q08379 1002 aa17.65■□□□□ 0.42
SNPH-201ENST00000381867 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.64■□□□□ 0.42
SNPH-201ENST00000381867 DNAJC5BQ9UF47 199 aa17.64■□□□□ 0.41
SNPH-201ENST00000381867 GOLGA6L3A6NEY3 463 aa17.64■□□□□ 0.41
SNPH-201ENST00000381867 GZF1Q9H116 711 aaPredicted RBP17.64■□□□□ 0.41
SNPH-201ENST00000381867 RRBP1Q9P2E9 1410 aaKnown RBP17.63■□□□□ 0.41
SNPH-201ENST00000381867 SLKQ9H2G2 1235 aaPredicted RBP17.62■□□□□ 0.41
SNPH-201ENST00000381867 RCAN3Q9UKA8 241 aa17.62■□□□□ 0.41
SNPH-201ENST00000381867 TIAM1Q13009 1591 aa17.62■□□□□ 0.41
SNPH-201ENST00000381867 CALD1Q05682 793 aaKnown RBP17.61■□□□□ 0.41
SNPH-201ENST00000381867 CHMP4AQ9BY43 222 aa17.6■□□□□ 0.41
SNPH-201ENST00000381867 SUPT6HQ7KZ85 1726 aaKnown RBP17.6■□□□□ 0.41
SNPH-201ENST00000381867 SYAP1Q96A49 352 aaPredicted RBP17.59■□□□□ 0.41
SNPH-201ENST00000381867 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.59■□□□□ 0.41
SNPH-201ENST00000381867 RWDD1Q9H446 243 aaPredicted RBP17.58■□□□□ 0.4
SNPH-201ENST00000381867 ARID3AQ99856 593 aa17.57■□□□□ 0.4
SNPH-201ENST00000381867 IPO8O15397 1037 aaKnown RBP17.57■□□□□ 0.4
SNPH-201ENST00000381867 PAK3O75914 559 aaPredicted RBP17.56■□□□□ 0.4
SNPH-201ENST00000381867 MAP3K1Q13233 1512 aa17.55■□□□□ 0.4
SNPH-201ENST00000381867 EPRSP07814 1512 aaKnown RBP17.55■□□□□ 0.4
SNPH-201ENST00000381867 ZNF644Q9H582 1327 aaPredicted RBP17.53■□□□□ 0.4
SNPH-201ENST00000381867 TNNT3P45378 269 aaPredicted RBP17.53■□□□□ 0.4
SNPH-201ENST00000381867 EVC2Q86UK5 1308 aa17.53■□□□□ 0.4
SNPH-201ENST00000381867 C9orf84Q5VXU9 1444 aa17.53■□□□□ 0.4
SNPH-201ENST00000381867 CSB-PGBD3P0DP91 1061 aa17.53■□□□□ 0.4
SNPH-201ENST00000381867 RTF1Q92541 710 aaKnown RBP17.53■□□□□ 0.4
SNPH-201ENST00000381867 HFM1A2PYH4 1435 aa17.52■□□□□ 0.4
SNPH-201ENST00000381867 KIAA1211Q6ZU35 1233 aa17.52■□□□□ 0.39
SNPH-201ENST00000381867 USP35Q9P2H5 1018 aa17.52■□□□□ 0.39
SNPH-201ENST00000381867 HTATSF1O43719 755 aaKnown RBP17.52■□□□□ 0.39
SNPH-201ENST00000381867 PMFBP1Q8TBY8 1022 aa17.52■□□□□ 0.39
SNPH-201ENST00000381867 RSPH6AQ9H0K4 717 aa17.5■□□□□ 0.39
SNPH-201ENST00000381867 NGDNQ8NEJ9 315 aaKnown RBP17.49■□□□□ 0.39
SNPH-201ENST00000381867 GNL2Q13823 731 aaKnown RBP17.48■□□□□ 0.39
SNPH-201ENST00000381867 NLRP13Q86W25 1043 aa17.48■□□□□ 0.39
SNPH-201ENST00000381867 MFAP1P55081 439 aaKnown RBP17.48■□□□□ 0.39
SNPH-201ENST00000381867 HSP90AA2PQ14568 343 aaPredicted RBP17.48■□□□□ 0.39
SNPH-201ENST00000381867 ITPRIPQ8IWB1 547 aa17.48■□□□□ 0.39
SNPH-201ENST00000381867 CCDC9Q9Y3X0 531 aaKnown RBP17.47■□□□□ 0.39
SNPH-201ENST00000381867 TRAK1Q9UPV9 953 aa17.47■□□□□ 0.39
SNPH-201ENST00000381867 POGZQ7Z3K3 1410 aa17.47■□□□□ 0.39
SNPH-201ENST00000381867 USP47Q96K76 1375 aa17.47■□□□□ 0.39
SNPH-201ENST00000381867 APBB1O00213 710 aa17.46■□□□□ 0.39
SNPH-201ENST00000381867 KIF14Q15058 1648 aa17.46■□□□□ 0.39
SNPH-201ENST00000381867 ZNF330Q9Y3S2 320 aaPredicted RBP17.45■□□□□ 0.38
SNPH-201ENST00000381867 TPM4P67936 248 aa17.45■□□□□ 0.38
SNPH-201ENST00000381867 LMOD3Q0VAK6 560 aa17.45■□□□□ 0.38
SNPH-201ENST00000381867 ROCK1Q13464 1354 aa17.45■□□□□ 0.38
SNPH-201ENST00000381867 ISY1Q9ULR0 285 aaKnown RBP17.45■□□□□ 0.38
SNPH-201ENST00000381867 AFAP1Q8N556 730 aa17.44■□□□□ 0.38
SNPH-201ENST00000381867 PCF11O94913 1555 aaKnown RBP17.44■□□□□ 0.38
SNPH-201ENST00000381867 U2AF1L5P0DN76 240 aaPredicted RBP17.43■□□□□ 0.38
SNPH-201ENST00000381867 U2AF1Q01081 240 aaKnown RBP eCLIP17.43■□□□□ 0.38
SNPH-201ENST00000381867 DAPK1P53355 1430 aa17.43■□□□□ 0.38
SNPH-201ENST00000381867 ZNF608Q9ULD9 1512 aaPredicted RBP17.43■□□□□ 0.38
SNPH-201ENST00000381867 ST20-MTHFSA0A0A6YYL1 179 aa17.43■□□□□ 0.38
SNPH-201ENST00000381867 CGNL1Q0VF96 1302 aa17.42■□□□□ 0.38
SNPH-201ENST00000381867 CSPP1Q1MSJ5 1256 aa17.42■□□□□ 0.38
SNPH-201ENST00000381867 NUTM2DQ5VT03 806 aaPredicted RBP17.42■□□□□ 0.38
SNPH-201ENST00000381867 SCAPERQ9BY12 1400 aa17.41■□□□□ 0.38
SNPH-201ENST00000381867 DDX11L8A8MPP1 907 aa17.41■□□□□ 0.38
SNPH-201ENST00000381867 CCDC141Q6ZP82 1450 aa17.41■□□□□ 0.38
SNPH-201ENST00000381867 PDE3BQ13370 1112 aa17.41■□□□□ 0.38
SNPH-201ENST00000381867 THOC2Q8NI27 1593 aaKnown RBP17.41■□□□□ 0.38
SNPH-201ENST00000381867 GOLGA6L1Q8N7Z2 621 aa17.41■□□□□ 0.38
SNPH-201ENST00000381867 CDK13Q14004 1512 aaKnown RBP17.4■□□□□ 0.38
SNPH-201ENST00000381867 PHF14O94880 888 aa17.4■□□□□ 0.38
SNPH-201ENST00000381867 MYBBP1AQ9BQG0 1328 aaKnown RBP17.39■□□□□ 0.37
SNPH-201ENST00000381867 KIAA1107Q9UPP5 1409 aa17.39■□□□□ 0.37
SNPH-201ENST00000381867 GSE1Q14687 1217 aa17.39■□□□□ 0.37
SNPH-201ENST00000381867 SLC52A1Q9NWF4 448 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms