RNA–Protein interactions for RNA: ENST00000379361.4

PTCHD1-201, Transcript of patched domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD1, Length 13,714 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD1-201ENST00000379361 KIF27Q86VH2 1401 aa13.84□□□□□ -0.19
PTCHD1-201ENST00000379361 RWDD1Q9H446 243 aaPredicted RBP13.84□□□□□ -0.19
PTCHD1-201ENST00000379361 VPS37DQ86XT2 251 aa13.84□□□□□ -0.19
PTCHD1-201ENST00000379361 KTN1Q86UP2 1357 aaKnown RBP13.83□□□□□ -0.19
PTCHD1-201ENST00000379361 CT47A1Q5JQC4 288 aaPredicted RBP13.83□□□□□ -0.2
PTCHD1-201ENST00000379361 MSH5O43196 834 aa13.83□□□□□ -0.2
PTCHD1-201ENST00000379361 EPS15P42566 896 aa13.83□□□□□ -0.2
PTCHD1-201ENST00000379361 EEA1Q15075 1411 aa13.83□□□□□ -0.2
PTCHD1-201ENST00000379361 GOLGA6L19H0YKK7 550 aa13.83□□□□□ -0.2
PTCHD1-201ENST00000379361 TCERG1O14776 1098 aaKnown RBP13.83□□□□□ -0.2
PTCHD1-201ENST00000379361 SENP3-EIF4A1A0A087X0R7 540 aa13.82□□□□□ -0.2
PTCHD1-201ENST00000379361 RAD21O60216 631 aa13.82□□□□□ -0.2
PTCHD1-201ENST00000379361 CCAR2Q8N163 923 aaKnown RBP13.82□□□□□ -0.2
PTCHD1-201ENST00000379361 FOXD1Q16676 465 aa13.82□□□□□ -0.2
PTCHD1-201ENST00000379361 ARID3AQ99856 593 aa13.81□□□□□ -0.2
PTCHD1-201ENST00000379361 FHAD1B1AJZ9 1412 aa13.81□□□□□ -0.2
PTCHD1-201ENST00000379361 EVA1CP58658 441 aa13.81□□□□□ -0.2
PTCHD1-201ENST00000379361 FAM184AQ8NB25 1140 aa13.81□□□□□ -0.2
PTCHD1-201ENST00000379361 U2AF1L5P0DN76 240 aaPredicted RBP13.81□□□□□ -0.2
PTCHD1-201ENST00000379361 U2AF1Q01081 240 aaKnown RBP eCLIP13.81□□□□□ -0.2
PTCHD1-201ENST00000379361 PAF1Q8N7H5 531 aa13.81□□□□□ -0.2
PTCHD1-201ENST00000379361 AK7Q96M32 723 aa13.81□□□□□ -0.2
PTCHD1-201ENST00000379361 TEX35Q5T0J7 233 aa13.81□□□□□ -0.2
PTCHD1-201ENST00000379361 AEBP2Q6ZN18 517 aaPredicted RBP13.8□□□□□ -0.2
PTCHD1-201ENST00000379361 CCAR1Q8IX12 1150 aaKnown RBP13.8□□□□□ -0.2
PTCHD1-201ENST00000379361 MYO6Q9UM54 1294 aa13.8□□□□□ -0.2
PTCHD1-201ENST00000379361 ZRSR2Q15696 482 aaKnown RBP13.8□□□□□ -0.2
PTCHD1-201ENST00000379361 ROCK2O75116 1388 aaKnown RBP13.8□□□□□ -0.2
PTCHD1-201ENST00000379361 TERF2IPQ9NYB0 399 aa13.79□□□□□ -0.2
PTCHD1-201ENST00000379361 PMFBP1Q8TBY8 1022 aa13.79□□□□□ -0.2
PTCHD1-201ENST00000379361 TRIM29Q14134 588 aa13.79□□□□□ -0.2
PTCHD1-201ENST00000379361 DHX16O60231 1041 aaKnown RBP13.79□□□□□ -0.2
PTCHD1-201ENST00000379361 PCMTD1Q96MG8 357 aaPredicted RBP13.79□□□□□ -0.2
PTCHD1-201ENST00000379361 DCAF11Q8TEB1 546 aa13.78□□□□□ -0.2
PTCHD1-201ENST00000379361 ATP6V1DQ9Y5K8 247 aa13.78□□□□□ -0.2
PTCHD1-201ENST00000379361 CPLX2Q6PUV4 134 aaKnown RBP13.78□□□□□ -0.2
PTCHD1-201ENST00000379361 SMC4Q9NTJ3 1288 aa13.78□□□□□ -0.2
PTCHD1-201ENST00000379361 C1orf141Q5JVX7 400 aa13.78□□□□□ -0.2
PTCHD1-201ENST00000379361 BAZ1BQ9UIG0 1483 aaKnown RBP13.77□□□□□ -0.21
PTCHD1-201ENST00000379361 BECN2A8MW95 431 aa13.77□□□□□ -0.21
PTCHD1-201ENST00000379361 AMPHP49418 695 aa13.76□□□□□ -0.21
PTCHD1-201ENST00000379361 FBXW7Q969H0 707 aa13.76□□□□□ -0.21
PTCHD1-201ENST00000379361 RUFY1Q96T51 708 aa13.76□□□□□ -0.21
PTCHD1-201ENST00000379361 MCTP1Q6DN14 999 aa13.76□□□□□ -0.21
PTCHD1-201ENST00000379361 DCTN1Q14203 1278 aa13.76□□□□□ -0.21
PTCHD1-201ENST00000379361 KLHL34Q8N239 644 aa13.75□□□□□ -0.21
PTCHD1-201ENST00000379361 NAP1L1P55209 391 aaKnown RBP13.75□□□□□ -0.21
PTCHD1-201ENST00000379361 GOLGA6L3A6NEY3 463 aa13.75□□□□□ -0.21
PTCHD1-201ENST00000379361 RBM33Q96EV2 1170 aaKnown RBP13.74□□□□□ -0.21
PTCHD1-201ENST00000379361 TMEM132AQ24JP5 1023 aa13.74□□□□□ -0.21
PTCHD1-201ENST00000379361 B4GALNT3Q6L9W6 998 aa13.74□□□□□ -0.21
PTCHD1-201ENST00000379361 ACBD3Q9H3P7 528 aa13.74□□□□□ -0.21
PTCHD1-201ENST00000379361 SLC4A10Q6U841 1118 aa13.74□□□□□ -0.21
PTCHD1-201ENST00000379361 DDX11L8A8MPP1 907 aa13.73□□□□□ -0.21
PTCHD1-201ENST00000379361 NGDNQ8NEJ9 315 aaKnown RBP13.73□□□□□ -0.21
PTCHD1-201ENST00000379361 GZF1Q9H116 711 aaPredicted RBP13.73□□□□□ -0.21
PTCHD1-201ENST00000379361 SLKQ9H2G2 1235 aaPredicted RBP13.73□□□□□ -0.21
PTCHD1-201ENST00000379361 GGT6Q6P531 493 aa13.73□□□□□ -0.21
PTCHD1-201ENST00000379361 MYO9BQ13459 2157 aa13.72□□□□□ -0.21
PTCHD1-201ENST00000379361 ERICH2A1L162 156 aa13.72□□□□□ -0.21
PTCHD1-201ENST00000379361 RALBP1Q15311 655 aa13.72□□□□□ -0.21
PTCHD1-201ENST00000379361 PHF23Q9BUL5 403 aaPredicted RBP13.72□□□□□ -0.21
PTCHD1-201ENST00000379361 MFAP1P55081 439 aaKnown RBP13.71□□□□□ -0.21
PTCHD1-201ENST00000379361 CPLX1O14810 134 aa13.71□□□□□ -0.21
PTCHD1-201ENST00000379361 RUFY2Q8WXA3 655 aa13.71□□□□□ -0.21
PTCHD1-201ENST00000379361 TRDNQ13061 729 aa13.71□□□□□ -0.21
PTCHD1-201ENST00000379361 TTC5Q8N0Z6 440 aa13.71□□□□□ -0.21
PTCHD1-201ENST00000379361 HSP90AB2PQ58FF8 381 aa13.71□□□□□ -0.22
PTCHD1-201ENST00000379361 NEXNQ0ZGT2 675 aa13.7□□□□□ -0.22
PTCHD1-201ENST00000379361 CCDC173Q0VFZ6 552 aa13.7□□□□□ -0.22
PTCHD1-201ENST00000379361 CCDC191Q8NCU4 936 aa13.7□□□□□ -0.22
PTCHD1-201ENST00000379361 NFXL1Q6ZNB6 911 aa13.69□□□□□ -0.22
PTCHD1-201ENST00000379361 BRMS1Q9HCU9 246 aa13.69□□□□□ -0.22
PTCHD1-201ENST00000379361 DIAPH3Q9NSV4 1193 aa13.69□□□□□ -0.22
PTCHD1-201ENST00000379361 CEP164Q9UPV0 1460 aa13.69□□□□□ -0.22
PTCHD1-201ENST00000379361 ANKRD18AQ8IVF6 992 aa13.68□□□□□ -0.22
PTCHD1-201ENST00000379361 MAP7D2Q96T17 732 aa13.68□□□□□ -0.22
PTCHD1-201ENST00000379361 NOM1Q5C9Z4 860 aaKnown RBP13.68□□□□□ -0.22
PTCHD1-201ENST00000379361 CARMIL2Q6F5E8 1435 aa13.68□□□□□ -0.22
PTCHD1-201ENST00000379361 SAFBQ15424 915 aaKnown RBP eCLIP13.68□□□□□ -0.22
PTCHD1-201ENST00000379361 APPP05067 770 aa13.67□□□□□ -0.22
PTCHD1-201ENST00000379361 ZFYVE27Q5T4F4 411 aa13.67□□□□□ -0.22
PTCHD1-201ENST00000379361 CEP162Q5TB80 1403 aa13.67□□□□□ -0.22
PTCHD1-201ENST00000379361 LTV1Q96GA3 475 aaPredicted RBP13.67□□□□□ -0.22
PTCHD1-201ENST00000379361 PRDM2Q13029 1718 aa13.66□□□□□ -0.22
PTCHD1-201ENST00000379361 RCAN3Q9UKA8 241 aa13.66□□□□□ -0.22
PTCHD1-201ENST00000379361 NOL8Q76FK4 1167 aaKnown RBP13.66□□□□□ -0.22
PTCHD1-201ENST00000379361 SETD1BQ9UPS6 1966 aaKnown RBP13.66□□□□□ -0.22
PTCHD1-201ENST00000379361 DEKP35659 375 aaKnown RBP13.66□□□□□ -0.22
PTCHD1-201ENST00000379361 OFD1O75665 1012 aa13.66□□□□□ -0.22
PTCHD1-201ENST00000379361 RNF20Q5VTR2 975 aa13.65□□□□□ -0.22
PTCHD1-201ENST00000379361 ARHGAP35Q9NRY4 1499 aa13.65□□□□□ -0.22
PTCHD1-201ENST00000379361 ZKSCAN1P17029 563 aaPredicted RBP13.64□□□□□ -0.23
PTCHD1-201ENST00000379361 PHLDB1Q86UU1 1377 aa13.64□□□□□ -0.23
PTCHD1-201ENST00000379361 ROCK1Q13464 1354 aa13.64□□□□□ -0.23
PTCHD1-201ENST00000379361 SYTL4Q96C24 671 aaPredicted RBP13.64□□□□□ -0.23
PTCHD1-201ENST00000379361 DESP17661 470 aa13.63□□□□□ -0.23
PTCHD1-201ENST00000379361 C9orf78Q9NZ63 289 aaPredicted RBP13.63□□□□□ -0.23
PTCHD1-201ENST00000379361 TRIM21P19474 475 aaKnown RBP13.63□□□□□ -0.23
PTCHD1-201ENST00000379361 RILPL2Q969X0 211 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms