RNA–Protein interactions for RNA: ENST00000378505.6

RPGR-203, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene RPGR, Length 4,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-203ENST00000378505 E9PSI1 815 aa14.22□□□□□ -0.13
RPGR-203ENST00000378505 EXOC6Q8TAG9 804 aa14.22□□□□□ -0.13
RPGR-203ENST00000378505 SYNJ1O43426 1573 aa14.22□□□□□ -0.13
RPGR-203ENST00000378505 PRXQ9BXM0 1461 aa14.22□□□□□ -0.13
RPGR-203ENST00000378505 LMOD3Q0VAK6 560 aa14.22□□□□□ -0.13
RPGR-203ENST00000378505 NCOA2Q15596 1464 aa14.22□□□□□ -0.13
RPGR-203ENST00000378505 GOLGA6L4A6NEF3 574 aa14.22□□□□□ -0.13
RPGR-203ENST00000378505 VGFO15240 615 aaPredicted RBP14.22□□□□□ -0.13
RPGR-203ENST00000378505 CFTRP13569 1480 aa14.22□□□□□ -0.13
RPGR-203ENST00000378505 FYCO1Q9BQS8 1478 aa14.21□□□□□ -0.13
RPGR-203ENST00000378505 NGEFQ8N5V2 710 aa14.21□□□□□ -0.13
RPGR-203ENST00000378505 STK31Q9BXU1 1019 aa14.21□□□□□ -0.13
RPGR-203ENST00000378505 PDE4AP27815 886 aa14.21□□□□□ -0.14
RPGR-203ENST00000378505 STAC3Q96MF2 364 aa14.21□□□□□ -0.14
RPGR-203ENST00000378505 PTMSP20962 102 aa14.2□□□□□ -0.14
RPGR-203ENST00000378505 MFAP1P55081 439 aaKnown RBP14.2□□□□□ -0.14
RPGR-203ENST00000378505 KIAA1211Q6ZU35 1233 aa14.2□□□□□ -0.14
RPGR-203ENST00000378505 CGNL1Q0VF96 1302 aa14.2□□□□□ -0.14
RPGR-203ENST00000378505 PLIN1O60240 522 aa14.19□□□□□ -0.14
RPGR-203ENST00000378505 RRP7AQ9Y3A4 280 aaKnown RBP14.19□□□□□ -0.14
RPGR-203ENST00000378505 HMMRO75330 724 aa14.19□□□□□ -0.14
RPGR-203ENST00000378505 CDK11BP21127 795 aaKnown RBP14.19□□□□□ -0.14
RPGR-203ENST00000378505 PAK3O75914 559 aaPredicted RBP14.19□□□□□ -0.14
RPGR-203ENST00000378505 CNTLNQ9NXG0 1405 aa14.19□□□□□ -0.14
RPGR-203ENST00000378505 ANKRD50Q9ULJ7 1429 aa14.19□□□□□ -0.14
RPGR-203ENST00000378505 APAF1O14727 1248 aa14.18□□□□□ -0.14
RPGR-203ENST00000378505 WASHC2AQ641Q2 1341 aa14.18□□□□□ -0.14
RPGR-203ENST00000378505 EVC2Q86UK5 1308 aa14.18□□□□□ -0.14
RPGR-203ENST00000378505 NAP1L2Q9ULW6 460 aaPredicted RBP14.17□□□□□ -0.14
RPGR-203ENST00000378505 FAM161AQ3B820 660 aa14.17□□□□□ -0.14
RPGR-203ENST00000378505 CRBNQ96SW2 442 aa14.17□□□□□ -0.14
RPGR-203ENST00000378505 TRHP20396 242 aaPredicted RBP14.17□□□□□ -0.14
RPGR-203ENST00000378505 FANCIQ9NVI1 1328 aa14.16□□□□□ -0.14
RPGR-203ENST00000378505 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.16□□□□□ -0.14
RPGR-203ENST00000378505 MIA2Q96PC5 1412 aa14.16□□□□□ -0.14
RPGR-203ENST00000378505 AQRO60306 1485 aaKnown RBP eCLIP14.16□□□□□ -0.149e-8■■■□□ 18.2
RPGR-203ENST00000378505 USP35Q9P2H5 1018 aa14.15□□□□□ -0.14
RPGR-203ENST00000378505 NRDCO43847 1150 aa14.15□□□□□ -0.14
RPGR-203ENST00000378505 MSNP26038 577 aaKnown RBP14.15□□□□□ -0.14
RPGR-203ENST00000378505 HDAC5Q9UQL6 1122 aa14.15□□□□□ -0.14
RPGR-203ENST00000378505 EID1Q9Y6B2 187 aa14.15□□□□□ -0.14
RPGR-203ENST00000378505 ZKSCAN2Q63HK3 967 aa14.14□□□□□ -0.15
RPGR-203ENST00000378505 GZF1Q9H116 711 aaPredicted RBP14.14□□□□□ -0.15
RPGR-203ENST00000378505 NGDNQ8NEJ9 315 aaKnown RBP14.14□□□□□ -0.15
RPGR-203ENST00000378505 GOLGA6L6A8MZA4 724 aa14.14□□□□□ -0.15
RPGR-203ENST00000378505 BCL2L13Q9BXK5 485 aa14.14□□□□□ -0.15
RPGR-203ENST00000378505 COG6Q9Y2V7 657 aa14.12□□□□□ -0.15
RPGR-203ENST00000378505 TOP2BQ02880 1626 aa14.12□□□□□ -0.15
RPGR-203ENST00000378505 AMPHP49418 695 aa14.11□□□□□ -0.15
RPGR-203ENST00000378505 SLC4A10Q6U841 1118 aa14.11□□□□□ -0.15
RPGR-203ENST00000378505 TAOK2Q9UL54 1235 aa14.11□□□□□ -0.15
RPGR-203ENST00000378505 GRIN2BQ13224 1484 aa14.1□□□□□ -0.15
RPGR-203ENST00000378505 BRD4O60885 1362 aaPredicted RBP14.1□□□□□ -0.15
RPGR-203ENST00000378505 EFCAB5A4FU69 1503 aa14.1□□□□□ -0.15
RPGR-203ENST00000378505 GOLGA6L3A6NEY3 463 aa14.09□□□□□ -0.15
RPGR-203ENST00000378505 TRIM6-TRIM34B2RNG4 842 aa14.08□□□□□ -0.16
RPGR-203ENST00000378505 ELL2O00472 640 aaPredicted RBP14.08□□□□□ -0.16
RPGR-203ENST00000378505 CSB-PGBD3P0DP91 1061 aa14.08□□□□□ -0.16
RPGR-203ENST00000378505 COG3Q96JB2 828 aa14.08□□□□□ -0.16
RPGR-203ENST00000378505 HFM1A2PYH4 1435 aa14.08□□□□□ -0.16
RPGR-203ENST00000378505 MINK1Q8N4C8 1332 aaPredicted RBP14.08□□□□□ -0.16
RPGR-203ENST00000378505 NPHP1O15259 732 aa14.08□□□□□ -0.16
RPGR-203ENST00000378505 CHAF1AQ13111 956 aaPredicted RBP14.08□□□□□ -0.16
RPGR-203ENST00000378505 SYAP1Q96A49 352 aaPredicted RBP14.07□□□□□ -0.16
RPGR-203ENST00000378505 NUTM2FA1L443 756 aa14.07□□□□□ -0.16
RPGR-203ENST00000378505 RUNDC1Q96C34 613 aa14.06□□□□□ -0.16
RPGR-203ENST00000378505 GPATCH3Q96I76 525 aa14.06□□□□□ -0.16
RPGR-203ENST00000378505 DIAPH1O60610 1272 aaKnown RBP14.06□□□□□ -0.16
RPGR-203ENST00000378505 DDX19BQ9UMR2 479 aa14.06□□□□□ -0.16
RPGR-203ENST00000378505 ST18O60284 1047 aa14.05□□□□□ -0.16
RPGR-203ENST00000378505 ANKRD45Q5TZF3 282 aa14.05□□□□□ -0.16
RPGR-203ENST00000378505 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP14.05□□□□□ -0.16
RPGR-203ENST00000378505 SLC4A3P48751 1232 aa14.04□□□□□ -0.16
RPGR-203ENST00000378505 HMGXB3Q12766 1538 aa14.04□□□□□ -0.16
RPGR-203ENST00000378505 TIAM1Q13009 1591 aa14.04□□□□□ -0.16
RPGR-203ENST00000378505 NBPF8Q3BBV2 869 aa14.04□□□□□ -0.16
RPGR-203ENST00000378505 DZIP1LQ8IYY4 767 aaKnown RBP14.04□□□□□ -0.16
RPGR-203ENST00000378505 PRDM2Q13029 1718 aa14.04□□□□□ -0.16
RPGR-203ENST00000378505 HTATSF1O43719 755 aaKnown RBP14.03□□□□□ -0.16
RPGR-203ENST00000378505 LTV1Q96GA3 475 aaPredicted RBP14.03□□□□□ -0.16
RPGR-203ENST00000378505 DRC7Q8IY82 874 aa14.03□□□□□ -0.16
RPGR-203ENST00000378505 EHBP1L1Q8N3D4 1523 aa14.02□□□□□ -0.16
RPGR-203ENST00000378505 RIPK4P57078 832 aa14.02□□□□□ -0.16
RPGR-203ENST00000378505 ADAMTS8Q9UP79 889 aa14.02□□□□□ -0.16
RPGR-203ENST00000378505 TOPBP1Q92547 1522 aa14.02□□□□□ -0.17
RPGR-203ENST00000378505 KIAA2012Q0VF49 1180 aa14.02□□□□□ -0.17
RPGR-203ENST00000378505 OSCARQ8IYS5 282 aa14.02□□□□□ -0.17
RPGR-203ENST00000378505 KIAA1107Q9UPP5 1409 aa14.02□□□□□ -0.17
RPGR-203ENST00000378505 AAMPQ13685 434 aa14.02□□□□□ -0.17
RPGR-203ENST00000378505 POLA1P09884 1462 aaPredicted RBP14.01□□□□□ -0.17
RPGR-203ENST00000378505 FOXD4L1Q9NU39 408 aa14.01□□□□□ -0.17
RPGR-203ENST00000378505 DDX11L8A8MPP1 907 aa14.01□□□□□ -0.17
RPGR-203ENST00000378505 AFAP1Q8N556 730 aa14.01□□□□□ -0.17
RPGR-203ENST00000378505 API5Q9BZZ5 524 aaKnown RBP14.01□□□□□ -0.17
RPGR-203ENST00000378505 SYNJ2O15056 1496 aa14□□□□□ -0.17
RPGR-203ENST00000378505 TROQ12816 1431 aaPredicted RBP14□□□□□ -0.17
RPGR-203ENST00000378505 GNL2Q13823 731 aaKnown RBP13.99□□□□□ -0.17
RPGR-203ENST00000378505 ZNF330Q9Y3S2 320 aaPredicted RBP13.99□□□□□ -0.17
RPGR-203ENST00000378505 NESP48681 1621 aa13.99□□□□□ -0.17
RPGR-203ENST00000378505 GSE1Q14687 1217 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms