RNA–Protein interactions for RNA: ENST00000378198.8

TDP2-202, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TDP2, Length 2,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-202ENST00000378198 MYO5CQ9NQX4 1742 aa24.73■■□□□ 1.55
TDP2-202ENST00000378198 TRPM1Q7Z4N2 1603 aa24.73■■□□□ 1.55
TDP2-202ENST00000378198 SYCP2Q9BX26 1530 aa24.73■■□□□ 1.55
TDP2-202ENST00000378198 TTC37Q6PGP7 1564 aa24.72■■□□□ 1.55
TDP2-202ENST00000378198 KTN1Q86UP2 1357 aaKnown RBP24.71■■□□□ 1.55
TDP2-202ENST00000378198 ARHGAP5Q13017 1502 aa24.71■■□□□ 1.55
TDP2-202ENST00000378198 PLXNC1O60486 1568 aa24.71■■□□□ 1.55
TDP2-202ENST00000378198 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.71■■□□□ 1.55
TDP2-202ENST00000378198 ST20-MTHFSA0A0A6YYL1 179 aa24.7■■□□□ 1.54
TDP2-202ENST00000378198 CCDC144AA2RUR9 1427 aa24.68■■□□□ 1.54
TDP2-202ENST00000378198 PLEKHH2Q8IVE3 1493 aa24.68■■□□□ 1.54
TDP2-202ENST00000378198 IQGAP3Q86VI3 1631 aa24.67■■□□□ 1.54
TDP2-202ENST00000378198 PNISRQ8TF01 805 aaKnown RBP24.66■■□□□ 1.54
TDP2-202ENST00000378198 ABCC2Q92887 1545 aa24.65■■□□□ 1.54
TDP2-202ENST00000378198 PRAG1Q86YV5 1406 aa24.65■■□□□ 1.54
TDP2-202ENST00000378198 NUDCQ9Y266 331 aa24.65■■□□□ 1.54
TDP2-202ENST00000378198 LAMC1P11047 1609 aa24.65■■□□□ 1.54
TDP2-202ENST00000378198 TMC1Q8TDI8 760 aa24.65■■□□□ 1.54
TDP2-202ENST00000378198 CNGB1Q14028 1251 aaPredicted RBP24.64■■□□□ 1.53
TDP2-202ENST00000378198 RALBP1Q15311 655 aa24.63■■□□□ 1.53
TDP2-202ENST00000378198 FANCIQ9NVI1 1328 aa24.63■■□□□ 1.53
TDP2-202ENST00000378198 BRD4O60885 1362 aaPredicted RBP24.63■■□□□ 1.53
TDP2-202ENST00000378198 MYBBP1AQ9BQG0 1328 aaKnown RBP24.61■■□□□ 1.53
TDP2-202ENST00000378198 DUOX2Q9NRD8 1548 aa24.6■■□□□ 1.53
TDP2-202ENST00000378198 PLA2R1Q13018 1463 aa24.6■■□□□ 1.53
TDP2-202ENST00000378198 LRPPRCP42704 1394 aaKnown RBP24.59■■□□□ 1.53
TDP2-202ENST00000378198 RNF123Q5XPI4 1314 aa24.59■■□□□ 1.53
TDP2-202ENST00000378198 GPRASP1Q5JY77 1395 aa24.59■■□□□ 1.53
TDP2-202ENST00000378198 EIF2AK4Q9P2K8 1649 aaKnown RBP24.58■■□□□ 1.53
TDP2-202ENST00000378198 B4GALNT3Q6L9W6 998 aa24.58■■□□□ 1.53
TDP2-202ENST00000378198 A2MP01023 1474 aa24.57■■□□□ 1.52
TDP2-202ENST00000378198 MAGI2Q86UL8 1455 aa24.56■■□□□ 1.52
TDP2-202ENST00000378198 ATP10AO60312 1499 aa24.55■■□□□ 1.52
TDP2-202ENST00000378198 PRDM15P57071 1507 aaPredicted RBP24.55■■□□□ 1.52
TDP2-202ENST00000378198 ERCC6L2Q5T890 1561 aa24.54■■□□□ 1.52
TDP2-202ENST00000378198 ERBINQ96RT1 1412 aa24.54■■□□□ 1.52
TDP2-202ENST00000378198 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.53■■□□□ 1.521e-7■□□□□ 8.2
TDP2-202ENST00000378198 RGL3Q3MIN7 710 aa24.52■■□□□ 1.52
TDP2-202ENST00000378198 ZCCHC11Q5TAX3 1644 aaKnown RBP24.51■■□□□ 1.51
TDP2-202ENST00000378198 PLCH2O75038 1416 aa24.51■■□□□ 1.51
TDP2-202ENST00000378198 COL17A1Q9UMD9 1497 aaPredicted RBP24.5■■□□□ 1.51
TDP2-202ENST00000378198 PARD3Q8TEW0 1356 aa24.49■■□□□ 1.51
TDP2-202ENST00000378198 NBPF1Q3BBV0 1214 aa24.49■■□□□ 1.51
TDP2-202ENST00000378198 MSH5O43196 834 aa24.48■■□□□ 1.51
TDP2-202ENST00000378198 NLRP13Q86W25 1043 aa24.47■■□□□ 1.51
TDP2-202ENST00000378198 UHRF1BP1LA0JNW5 1464 aa24.46■■□□□ 1.51
TDP2-202ENST00000378198 ABCC1P33527 1531 aa24.46■■□□□ 1.51
TDP2-202ENST00000378198 WASHC2CQ9Y4E1 1318 aa24.46■■□□□ 1.51
TDP2-202ENST00000378198 EFCAB2Q5VUJ9 269 aa24.45■■□□□ 1.5
TDP2-202ENST00000378198 RNF17Q9BXT8 1623 aaKnown RBP24.45■■□□□ 1.5
TDP2-202ENST00000378198 PER1O15534 1290 aaPredicted RBP24.44■■□□□ 1.5
TDP2-202ENST00000378198 TESK2Q96S53 571 aa24.42■■□□□ 1.5
TDP2-202ENST00000378198 CLASP1Q7Z460 1538 aa24.4■■□□□ 1.5
TDP2-202ENST00000378198 DISP3Q9P2K9 1392 aa24.39■■□□□ 1.5
TDP2-202ENST00000378198 CCDC136Q96JN2 1154 aa24.39■■□□□ 1.49
TDP2-202ENST00000378198 ARAP3Q8WWN8 1544 aa24.38■■□□□ 1.49
TDP2-202ENST00000378198 PDE3BQ13370 1112 aa24.38■■□□□ 1.49
TDP2-202ENST00000378198 ZMYM4Q5VZL5 1548 aa24.37■■□□□ 1.49
TDP2-202ENST00000378198 TMF1P82094 1093 aa24.37■■□□□ 1.49
TDP2-202ENST00000378198 INSRP06213 1382 aa24.37■■□□□ 1.49
TDP2-202ENST00000378198 CEP152O94986 1710 aa24.37■■□□□ 1.49
TDP2-202ENST00000378198 TRAPPC8Q9Y2L5 1435 aa24.36■■□□□ 1.49
TDP2-202ENST00000378198 RTEL1-TNFRSF6BF6WH68 1400 aa24.36■■□□□ 1.49
TDP2-202ENST00000378198 SENP3-EIF4A1A0A087X0R7 540 aa24.34■■□□□ 1.49
TDP2-202ENST00000378198 MADDQ8WXG6 1647 aa24.34■■□□□ 1.49
TDP2-202ENST00000378198 IQGAP1P46940 1657 aa24.34■■□□□ 1.49
TDP2-202ENST00000378198 SPHKAPQ2M3C7 1700 aa24.34■■□□□ 1.49
TDP2-202ENST00000378198 ERICH6Q7L0X2 663 aa24.33■■□□□ 1.48
TDP2-202ENST00000378198 TRPM2O94759 1503 aa24.32■■□□□ 1.48
TDP2-202ENST00000378198 DEPDC5O75140 1603 aa24.32■■□□□ 1.48
TDP2-202ENST00000378198 PANK3Q9H999 370 aa24.31■■□□□ 1.48
TDP2-202ENST00000378198 ZFYVE16Q7Z3T8 1539 aa24.3■■□□□ 1.48
TDP2-202ENST00000378198 STAC3Q96MF2 364 aa24.3■■□□□ 1.48
TDP2-202ENST00000378198 SPAG9O60271 1321 aaKnown RBP24.3■■□□□ 1.48
TDP2-202ENST00000378198 RRP1P56182 461 aaKnown RBP24.29■■□□□ 1.48
TDP2-202ENST00000378198 TET3O43151 1660 aa24.28■■□□□ 1.48
TDP2-202ENST00000378198 BLMP54132 1417 aaPredicted RBP24.28■■□□□ 1.48
TDP2-202ENST00000378198 CC2D1BQ5T0F9 858 aaKnown RBP24.28■■□□□ 1.48
TDP2-202ENST00000378198 RCAN3Q9UKA8 241 aa24.27■■□□□ 1.48
TDP2-202ENST00000378198 PTPRTO14522 1441 aa24.26■■□□□ 1.47
TDP2-202ENST00000378198 CLTCL1P53675 1640 aa24.25■■□□□ 1.47
TDP2-202ENST00000378198 SCAPERQ9BY12 1400 aa24.23■■□□□ 1.47
TDP2-202ENST00000378198 KIAA1210Q9ULL0 1709 aa24.23■■□□□ 1.47
TDP2-202ENST00000378198 ABCA9Q8IUA7 1624 aa24.22■■□□□ 1.47
TDP2-202ENST00000378198 INO80Q9ULG1 1556 aaPredicted RBP24.22■■□□□ 1.47
TDP2-202ENST00000378198 WDR7Q9Y4E6 1490 aa24.21■■□□□ 1.47
TDP2-202ENST00000378198 SALL2Q9Y467 1007 aaPredicted RBP24.21■■□□□ 1.47
TDP2-202ENST00000378198 SYNMO15061 1565 aa24.21■■□□□ 1.47
TDP2-202ENST00000378198 SCAF11Q99590 1463 aaKnown RBP24.2■■□□□ 1.47
TDP2-202ENST00000378198 AFAP1Q8N556 730 aa24.2■■□□□ 1.47
TDP2-202ENST00000378198 VWDEQ8N2E2 1590 aa24.2■■□□□ 1.46
TDP2-202ENST00000378198 NEURL4Q96JN8 1562 aa24.2■■□□□ 1.46
TDP2-202ENST00000378198 CDCA8Q53HL2 280 aa24.2■■□□□ 1.46
TDP2-202ENST00000378198 ATP7AQ04656 1500 aa24.2■■□□□ 1.46
TDP2-202ENST00000378198 KANK1Q14678 1352 aa24.18■■□□□ 1.46
TDP2-202ENST00000378198 EXOC6Q8TAG9 804 aa24.16■■□□□ 1.46
TDP2-202ENST00000378198 FANCAO15360 1455 aa24.15■■□□□ 1.46
TDP2-202ENST00000378198 CDCA7LQ96GN5 454 aa24.14■■□□□ 1.46
TDP2-202ENST00000378198 KNSTRNQ9Y448 316 aa24.14■■□□□ 1.46
TDP2-202ENST00000378198 MYOM1P52179 1685 aa24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms