RNA–Protein interactions for RNA: ENST00000377534.7

LMO7-205, Transcript of LIM domain 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LMO7, Length 4,896 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO7-205ENST00000377534 PREX2Q70Z35 1606 aa10.28□□□□□ -0.76
LMO7-205ENST00000377534 LMOD2Q6P5Q4 547 aa10.28□□□□□ -0.76
LMO7-205ENST00000377534 SAMD9LQ8IVG5 1584 aa10.27□□□□□ -0.77
LMO7-205ENST00000377534 TTC37Q6PGP7 1564 aa10.27□□□□□ -0.77
LMO7-205ENST00000377534 DENND4BO75064 1496 aaPredicted RBP10.27□□□□□ -0.77
LMO7-205ENST00000377534 PLCH2O75038 1416 aa10.27□□□□□ -0.77
LMO7-205ENST00000377534 THEMISQ8N1K5 641 aaPredicted RBP10.27□□□□□ -0.77
LMO7-205ENST00000377534 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.26□□□□□ -0.77
LMO7-205ENST00000377534 MBD5Q9P267 1494 aa10.26□□□□□ -0.77
LMO7-205ENST00000377534 DCAF11Q8TEB1 546 aa10.26□□□□□ -0.77
LMO7-205ENST00000377534 ZCCHC11Q5TAX3 1644 aaKnown RBP10.26□□□□□ -0.77
LMO7-205ENST00000377534 MEX3CQ5U5Q3 659 aaKnown RBP10.26□□□□□ -0.77
LMO7-205ENST00000377534 RGL3Q3MIN7 710 aa10.25□□□□□ -0.77
LMO7-205ENST00000377534 NBPF8Q3BBV2 869 aa10.25□□□□□ -0.77
LMO7-205ENST00000377534 KDM5BQ9UGL1 1544 aa10.25□□□□□ -0.77
LMO7-205ENST00000377534 MYO5CQ9NQX4 1742 aa10.25□□□□□ -0.77
LMO7-205ENST00000377534 CARD11Q9BXL7 1154 aa10.24□□□□□ -0.77
LMO7-205ENST00000377534 CCER2I3L3R5 266 aa10.24□□□□□ -0.77
LMO7-205ENST00000377534 RAPGEF3O95398 923 aa10.24□□□□□ -0.77
LMO7-205ENST00000377534 ASXL2Q76L83 1435 aa10.24□□□□□ -0.77
LMO7-205ENST00000377534 CCDC144AA2RUR9 1427 aa10.24□□□□□ -0.77
LMO7-205ENST00000377534 SCAPERQ9BY12 1400 aa10.24□□□□□ -0.77
LMO7-205ENST00000377534 CNGB1Q14028 1251 aaPredicted RBP10.23□□□□□ -0.77
LMO7-205ENST00000377534 CDC42BPBQ9Y5S2 1711 aa10.23□□□□□ -0.77
LMO7-205ENST00000377534 WDR7Q9Y4E6 1490 aa10.23□□□□□ -0.77
LMO7-205ENST00000377534 AFAP1Q8N556 730 aa10.23□□□□□ -0.77
LMO7-205ENST00000377534 ANKLE2Q86XL3 938 aa10.22□□□□□ -0.77
LMO7-205ENST00000377534 ZBTB7CA1YPR0 619 aa10.21□□□□□ -0.77
LMO7-205ENST00000377534 WASHC2AQ641Q2 1341 aa10.21□□□□□ -0.77
LMO7-205ENST00000377534 PPP6R1Q9UPN7 881 aa10.2□□□□□ -0.78
LMO7-205ENST00000377534 NPM2Q86SE8 214 aaKnown RBP10.2□□□□□ -0.78
LMO7-205ENST00000377534 DUOX2Q9NRD8 1548 aa10.2□□□□□ -0.78
LMO7-205ENST00000377534 FAM135AQ9P2D6 1515 aa10.2□□□□□ -0.78
LMO7-205ENST00000377534 PLEKHG5O94827 1062 aa10.2□□□□□ -0.78
LMO7-205ENST00000377534 USP47Q96K76 1375 aa10.2□□□□□ -0.78
LMO7-205ENST00000377534 FANCAO15360 1455 aa10.19□□□□□ -0.78
LMO7-205ENST00000377534 TRAPPC8Q9Y2L5 1435 aa10.19□□□□□ -0.78
LMO7-205ENST00000377534 ROCK2O75116 1388 aaKnown RBP10.19□□□□□ -0.78
LMO7-205ENST00000377534 CCDC7Q96M83 1385 aa10.19□□□□□ -0.78
LMO7-205ENST00000377534 NEFLP07196 543 aa10.18□□□□□ -0.78
LMO7-205ENST00000377534 ATF3P18847 181 aa10.18□□□□□ -0.78
LMO7-205ENST00000377534 ERBINQ96RT1 1412 aa10.18□□□□□ -0.78
LMO7-205ENST00000377534 KDM5DQ9BY66 1539 aa10.17□□□□□ -0.78
LMO7-205ENST00000377534 PODXL2Q9NZ53 605 aa10.17□□□□□ -0.78
LMO7-205ENST00000377534 MAST1Q9Y2H9 1570 aa10.17□□□□□ -0.78
LMO7-205ENST00000377534 ADGRL1O94910 1474 aa10.17□□□□□ -0.78
LMO7-205ENST00000377534 CCDC9Q9Y3X0 531 aaKnown RBP10.17□□□□□ -0.78
LMO7-205ENST00000377534 CNTLNQ9NXG0 1405 aa10.16□□□□□ -0.78
LMO7-205ENST00000377534 CDCA8Q53HL2 280 aa10.16□□□□□ -0.78
LMO7-205ENST00000377534 KIF7Q2M1P5 1343 aa10.16□□□□□ -0.78
LMO7-205ENST00000377534 ABCC1P33527 1531 aa10.16□□□□□ -0.78
LMO7-205ENST00000377534 ARHGEF12Q9NZN5 1544 aa10.16□□□□□ -0.78
LMO7-205ENST00000377534 HNRNPUQ00839 825 aaKnown RBP eCLIP10.15□□□□□ -0.78
LMO7-205ENST00000377534 MRS2Q9HD23 443 aa10.15□□□□□ -0.78
LMO7-205ENST00000377534 PLXNC1O60486 1568 aa10.14□□□□□ -0.79
LMO7-205ENST00000377534 RTEL1-TNFRSF6BF6WH68 1400 aa10.14□□□□□ -0.79
LMO7-205ENST00000377534 VGFO15240 615 aaPredicted RBP10.14□□□□□ -0.79
LMO7-205ENST00000377534 DCAF8L1A6NGE4 600 aa10.13□□□□□ -0.79
LMO7-205ENST00000377534 C11orf95C9JLR9 678 aaPredicted RBP10.13□□□□□ -0.79
LMO7-205ENST00000377534 FAM9BQ8IZU0 186 aa10.13□□□□□ -0.79
LMO7-205ENST00000377534 PROSER2Q86WR7 435 aaPredicted RBP10.13□□□□□ -0.79
LMO7-205ENST00000377534 ST20-MTHFSA0A0A6YYL1 179 aa10.13□□□□□ -0.79
LMO7-205ENST00000377534 TXNDC2Q86VQ3 553 aa10.13□□□□□ -0.79
LMO7-205ENST00000377534 ARAP3Q8WWN8 1544 aa10.12□□□□□ -0.79
LMO7-205ENST00000377534 TOM1O60784 492 aa10.11□□□□□ -0.79
LMO7-205ENST00000377534 RALGAPBQ86X10 1494 aa10.11□□□□□ -0.79
LMO7-205ENST00000377534 RTN4Q9NQC3 1192 aaKnown RBP10.11□□□□□ -0.79
LMO7-205ENST00000377534 UNC13BO14795 1591 aa10.11□□□□□ -0.79
LMO7-205ENST00000377534 UHRF1BP1Q6BDS2 1440 aa10.1□□□□□ -0.79
LMO7-205ENST00000377534 PRKRIP1Q9H875 184 aaPredicted RBP10.1□□□□□ -0.79
LMO7-205ENST00000377534 ATP7AQ04656 1500 aa10.1□□□□□ -0.79
LMO7-205ENST00000377534 PIP4K2BP78356 416 aa10.09□□□□□ -0.79
LMO7-205ENST00000377534 DHX29Q7Z478 1369 aaKnown RBP10.09□□□□□ -0.79
LMO7-205ENST00000377534 TMC1Q8TDI8 760 aa10.09□□□□□ -0.79
LMO7-205ENST00000377534 ABCA9Q8IUA7 1624 aa10.08□□□□□ -0.8
LMO7-205ENST00000377534 IQGAP3Q86VI3 1631 aa10.08□□□□□ -0.8
LMO7-205ENST00000377534 STK26Q9P289 416 aa10.08□□□□□ -0.8
LMO7-205ENST00000377534 SPATA31E1Q6ZUB1 1445 aa10.08□□□□□ -0.8
LMO7-205ENST00000377534 ZFYVE16Q7Z3T8 1539 aa10.08□□□□□ -0.8
LMO7-205ENST00000377534 SLC52A1Q9NWF4 448 aa10.08□□□□□ -0.8
LMO7-205ENST00000377534 ZNF518AQ6AHZ1 1483 aa10.08□□□□□ -0.8
LMO7-205ENST00000377534 TMF1P82094 1093 aa10.07□□□□□ -0.8
LMO7-205ENST00000377534 NBPF1Q3BBV0 1214 aa10.07□□□□□ -0.8
LMO7-205ENST00000377534 UBAP1LF5GYI3 381 aa10.06□□□□□ -0.8
LMO7-205ENST00000377534 PRAG1Q86YV5 1406 aa10.06□□□□□ -0.8
LMO7-205ENST00000377534 PAK3O75914 559 aaPredicted RBP10.06□□□□□ -0.8
LMO7-205ENST00000377534 SF3B2Q13435 895 aaKnown RBP10.06□□□□□ -0.8
LMO7-205ENST00000377534 FKBP8Q14318 412 aa10.06□□□□□ -0.8
LMO7-205ENST00000377534 SRPK2P78362 688 aaKnown RBP10.05□□□□□ -0.8
LMO7-205ENST00000377534 NGDNQ8NEJ9 315 aaKnown RBP10.05□□□□□ -0.8
LMO7-205ENST00000377534 STAC3Q96MF2 364 aa10.05□□□□□ -0.8
LMO7-205ENST00000377534 A2MP01023 1474 aa10.04□□□□□ -0.8
LMO7-205ENST00000377534 PLA2R1Q13018 1463 aa10.04□□□□□ -0.8
LMO7-205ENST00000377534 CSB-PGBD3P0DP91 1061 aa10.04□□□□□ -0.8
LMO7-205ENST00000377534 SUPT16HQ9Y5B9 1047 aaKnown RBP10.04□□□□□ -0.8
LMO7-205ENST00000377534 CFAP74Q9C0B2 1584 aa10.04□□□□□ -0.8
LMO7-205ENST00000377534 KDM5CP41229 1560 aa10.03□□□□□ -0.8
LMO7-205ENST00000377534 MAGI2Q86UL8 1455 aa10.03□□□□□ -0.8
LMO7-205ENST00000377534 HDGFL2Q7Z4V5 671 aaPredicted RBP10.02□□□□□ -0.81
LMO7-205ENST00000377534 EIF2AK4Q9P2K8 1649 aaKnown RBP10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 8.9 ms