RNA–Protein interactions for RNA: ENST00000376227.3

CCDC22-201, Transcript of coiled-coil domain containing 22, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC22, Length 2,319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC22-201ENST00000376227 KDM2AQ9Y2K7 1162 aa20.46■□□□□ 0.87
CCDC22-201ENST00000376227 MYBBP1AQ9BQG0 1328 aaKnown RBP20.46■□□□□ 0.87
CCDC22-201ENST00000376227 ST20-MTHFSA0A0A6YYL1 179 aa20.45■□□□□ 0.87
CCDC22-201ENST00000376227 CCDC141Q6ZP82 1450 aa20.45■□□□□ 0.86
CCDC22-201ENST00000376227 HNRNPMP52272 730 aaKnown RBP eCLIP20.45■□□□□ 0.86
CCDC22-201ENST00000376227 CCDC136Q96JN2 1154 aa20.42■□□□□ 0.86
CCDC22-201ENST00000376227 LRPPRCP42704 1394 aaKnown RBP20.42■□□□□ 0.86
CCDC22-201ENST00000376227 FAM135AQ9P2D6 1515 aa20.41■□□□□ 0.86
CCDC22-201ENST00000376227 CCDC144AA2RUR9 1427 aa20.4■□□□□ 0.86
CCDC22-201ENST00000376227 PREX2Q70Z35 1606 aa20.37■□□□□ 0.85
CCDC22-201ENST00000376227 MYT1LQ9UL68 1186 aa20.37■□□□□ 0.85
CCDC22-201ENST00000376227 SAMD9LQ8IVG5 1584 aa20.37■□□□□ 0.85
CCDC22-201ENST00000376227 PRAG1Q86YV5 1406 aa20.36■□□□□ 0.85
CCDC22-201ENST00000376227 E9PCH4 1651 aa20.36■□□□□ 0.85
CCDC22-201ENST00000376227 NLRP13Q86W25 1043 aa20.35■□□□□ 0.85
CCDC22-201ENST00000376227 TRPM1Q7Z4N2 1603 aa20.33■□□□□ 0.84
CCDC22-201ENST00000376227 MAST1Q9Y2H9 1570 aa20.32■□□□□ 0.84
CCDC22-201ENST00000376227 CDC42BPBQ9Y5S2 1711 aa20.32■□□□□ 0.84
CCDC22-201ENST00000376227 PDE3BQ13370 1112 aa20.31■□□□□ 0.84
CCDC22-201ENST00000376227 GPRASP1Q5JY77 1395 aa20.31■□□□□ 0.84
CCDC22-201ENST00000376227 PARD3Q8TEW0 1356 aa20.31■□□□□ 0.84
CCDC22-201ENST00000376227 WASHC2CQ9Y4E1 1318 aa20.31■□□□□ 0.84
CCDC22-201ENST00000376227 UNC13BO14795 1591 aa20.31■□□□□ 0.84
CCDC22-201ENST00000376227 PLEKHH2Q8IVE3 1493 aa20.29■□□□□ 0.84
CCDC22-201ENST00000376227 SYCP2Q9BX26 1530 aa20.28■□□□□ 0.84
CCDC22-201ENST00000376227 LAMC1P11047 1609 aa20.28■□□□□ 0.84
CCDC22-201ENST00000376227 ARHGAP5Q13017 1502 aa20.28■□□□□ 0.84
CCDC22-201ENST00000376227 RRP1P56182 461 aaKnown RBP20.27■□□□□ 0.84
CCDC22-201ENST00000376227 NOP58Q9Y2X3 529 aaKnown RBP20.27■□□□□ 0.84
CCDC22-201ENST00000376227 ANP32AP39687 249 aaKnown RBP20.26■□□□□ 0.83
CCDC22-201ENST00000376227 RGL3Q3MIN7 710 aa20.26■□□□□ 0.83
CCDC22-201ENST00000376227 EIF2AK4Q9P2K8 1649 aaKnown RBP20.26■□□□□ 0.83
CCDC22-201ENST00000376227 A2MP01023 1474 aa20.25■□□□□ 0.83
CCDC22-201ENST00000376227 COL17A1Q9UMD9 1497 aaPredicted RBP20.25■□□□□ 0.83
CCDC22-201ENST00000376227 INSRP06213 1382 aa20.25■□□□□ 0.83
CCDC22-201ENST00000376227 PLXNC1O60486 1568 aa20.25■□□□□ 0.83
CCDC22-201ENST00000376227 RCAN3Q9UKA8 241 aa20.25■□□□□ 0.83
CCDC22-201ENST00000376227 BCL11AQ9H165 835 aa20.24■□□□□ 0.83
CCDC22-201ENST00000376227 PRDM15P57071 1507 aaPredicted RBP20.24■□□□□ 0.83
CCDC22-201ENST00000376227 SENP3-EIF4A1A0A087X0R7 540 aa20.24■□□□□ 0.83
CCDC22-201ENST00000376227 GRWD1Q9BQ67 446 aaKnown RBP eCLIP20.24■□□□□ 0.83
CCDC22-201ENST00000376227 PLA2R1Q13018 1463 aa20.23■□□□□ 0.83
CCDC22-201ENST00000376227 IQGAP3Q86VI3 1631 aa20.23■□□□□ 0.83
CCDC22-201ENST00000376227 PER1O15534 1290 aaPredicted RBP20.22■□□□□ 0.83
CCDC22-201ENST00000376227 NBPF1Q3BBV0 1214 aa20.22■□□□□ 0.83
CCDC22-201ENST00000376227 ZMYM4Q5VZL5 1548 aa20.22■□□□□ 0.83
CCDC22-201ENST00000376227 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.21■□□□□ 0.83
CCDC22-201ENST00000376227 DUOX2Q9NRD8 1548 aa20.21■□□□□ 0.83
CCDC22-201ENST00000376227 TMF1P82094 1093 aa20.21■□□□□ 0.83
CCDC22-201ENST00000376227 ATP10AO60312 1499 aa20.21■□□□□ 0.83
CCDC22-201ENST00000376227 TTC37Q6PGP7 1564 aa20.21■□□□□ 0.83
CCDC22-201ENST00000376227 ERBINQ96RT1 1412 aa20.2■□□□□ 0.82
CCDC22-201ENST00000376227 TESK2Q96S53 571 aa20.19■□□□□ 0.82
CCDC22-201ENST00000376227 IPO9Q96P70 1041 aaKnown RBP20.18■□□□□ 0.82
CCDC22-201ENST00000376227 DISP3Q9P2K9 1392 aa20.17■□□□□ 0.82
CCDC22-201ENST00000376227 MAGI2Q86UL8 1455 aa20.17■□□□□ 0.82
CCDC22-201ENST00000376227 MYO5CQ9NQX4 1742 aa20.17■□□□□ 0.82
CCDC22-201ENST00000376227 TCERG1O14776 1098 aaKnown RBP20.15■□□□□ 0.82
CCDC22-201ENST00000376227 SALL2Q9Y467 1007 aaPredicted RBP20.15■□□□□ 0.82
CCDC22-201ENST00000376227 CC2D1BQ5T0F9 858 aaKnown RBP20.15■□□□□ 0.82
CCDC22-201ENST00000376227 EXOC6Q8TAG9 804 aa20.15■□□□□ 0.82
CCDC22-201ENST00000376227 PANK3Q9H999 370 aa20.15■□□□□ 0.82
CCDC22-201ENST00000376227 BLMP54132 1417 aaPredicted RBP20.15■□□□□ 0.82
CCDC22-201ENST00000376227 ABCC2Q92887 1545 aa20.15■□□□□ 0.82
CCDC22-201ENST00000376227 SHROOM2Q13796 1616 aa20.13■□□□□ 0.81
CCDC22-201ENST00000376227 ZBTB47Q9UFB7 747 aaPredicted RBP20.12■□□□□ 0.81
CCDC22-201ENST00000376227 EFCAB2Q5VUJ9 269 aa20.1■□□□□ 0.81
CCDC22-201ENST00000376227 PLCH2O75038 1416 aa20.1■□□□□ 0.81
CCDC22-201ENST00000376227 STAC3Q96MF2 364 aa20.09■□□□□ 0.81
CCDC22-201ENST00000376227 RNF17Q9BXT8 1623 aaKnown RBP20.09■□□□□ 0.81
CCDC22-201ENST00000376227 PAK3O75914 559 aaPredicted RBP20.08■□□□□ 0.81
CCDC22-201ENST00000376227 MS4A1P11836 297 aa20.08■□□□□ 0.81
CCDC22-201ENST00000376227 CDCA8Q53HL2 280 aa20.08■□□□□ 0.81
CCDC22-201ENST00000376227 CHD1O14646 1710 aa20.08■□□□□ 0.81
CCDC22-201ENST00000376227 CDCA7LQ96GN5 454 aa20.07■□□□□ 0.8
CCDC22-201ENST00000376227 KNSTRNQ9Y448 316 aa20.05■□□□□ 0.8
CCDC22-201ENST00000376227 ABCC1P33527 1531 aa20.03■□□□□ 0.8
CCDC22-201ENST00000376227 DEKP35659 375 aaKnown RBP20.02■□□□□ 0.8
CCDC22-201ENST00000376227 NBR1Q14596 966 aa20.02■□□□□ 0.8
CCDC22-201ENST00000376227 WDR43Q15061 677 aaKnown RBP eCLIP20.01■□□□□ 0.79
CCDC22-201ENST00000376227 PDE4AP27815 886 aa20.01■□□□□ 0.79
CCDC22-201ENST00000376227 RTL5Q5HYW3 569 aaPredicted RBP20.01■□□□□ 0.79
CCDC22-201ENST00000376227 RTEL1-TNFRSF6BF6WH68 1400 aa20■□□□□ 0.79
CCDC22-201ENST00000376227 WDR7Q9Y4E6 1490 aa20■□□□□ 0.79
CCDC22-201ENST00000376227 MADDQ8WXG6 1647 aa20■□□□□ 0.79
CCDC22-201ENST00000376227 TRPM2O94759 1503 aa19.99■□□□□ 0.79
CCDC22-201ENST00000376227 SCAF11Q99590 1463 aaKnown RBP19.99■□□□□ 0.79
CCDC22-201ENST00000376227 SCAPERQ9BY12 1400 aa19.99■□□□□ 0.79
CCDC22-201ENST00000376227 SPAG9O60271 1321 aaKnown RBP19.99■□□□□ 0.79
CCDC22-201ENST00000376227 UHRF1BP1LA0JNW5 1464 aa19.99■□□□□ 0.79
CCDC22-201ENST00000376227 BACH2Q9BYV9 841 aa19.98■□□□□ 0.79
CCDC22-201ENST00000376227 TRAPPC8Q9Y2L5 1435 aa19.98■□□□□ 0.79
CCDC22-201ENST00000376227 EIF3AQ14152 1382 aaKnown RBP19.98■□□□□ 0.79
CCDC22-201ENST00000376227 ADAMTS8Q9UP79 889 aa19.98■□□□□ 0.79
CCDC22-201ENST00000376227 SYNMO15061 1565 aa19.98■□□□□ 0.79
CCDC22-201ENST00000376227 IQGAP1P46940 1657 aa19.97■□□□□ 0.79
CCDC22-201ENST00000376227 PPP2R1AP30153 589 aa19.97■□□□□ 0.79
CCDC22-201ENST00000376227 SLC24A1O60721 1099 aa19.96■□□□□ 0.79
CCDC22-201ENST00000376227 CRBNQ96SW2 442 aa19.96■□□□□ 0.79
CCDC22-201ENST00000376227 ZCCHC11Q5TAX3 1644 aaKnown RBP19.96■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 84.9 ms