RNA–Protein interactions for RNA: ENST00000374232.7

SNX30-201, Transcript of sorting nexin family member 30, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SNX30, Length 7,622 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX30-201ENST00000374232 GPATCH3Q96I76 525 aa18.07■□□□□ 0.48
SNX30-201ENST00000374232 TPD52L1Q16890 204 aaPredicted RBP18.07■□□□□ 0.48
SNX30-201ENST00000374232 KANK4Q5T7N3 995 aaPredicted RBP18.06■□□□□ 0.48
SNX30-201ENST00000374232 ANKRD45Q5TZF3 282 aa18.06■□□□□ 0.48
SNX30-201ENST00000374232 SYAP1Q96A49 352 aaPredicted RBP18.06■□□□□ 0.48
SNX30-201ENST00000374232 STK31Q9BXU1 1019 aa18.05■□□□□ 0.48
SNX30-201ENST00000374232 H3BQV1 296 aa18.05■□□□□ 0.48
SNX30-201ENST00000374232 HDGFP51858 240 aaKnown RBP18.05■□□□□ 0.48
SNX30-201ENST00000374232 IFFO2Q5TF58 517 aa18.05■□□□□ 0.48
SNX30-201ENST00000374232 HTATSF1O43719 755 aaKnown RBP18.05■□□□□ 0.48
SNX30-201ENST00000374232 KANK1Q14678 1352 aa18.04■□□□□ 0.48
SNX30-201ENST00000374232 ERCC6Q03468 1493 aa18.02■□□□□ 0.48
SNX30-201ENST00000374232 DHX37Q8IY37 1157 aaKnown RBP18.02■□□□□ 0.48
SNX30-201ENST00000374232 TPM3P06753 285 aa18.02■□□□□ 0.47
SNX30-201ENST00000374232 ZNF771Q7L3S4 317 aaPredicted RBP18.02■□□□□ 0.47
SNX30-201ENST00000374232 PMFBP1Q8TBY8 1022 aa18.01■□□□□ 0.47
SNX30-201ENST00000374232 KIF16BQ96L93 1317 aa18.01■□□□□ 0.47
SNX30-201ENST00000374232 SPAG9O60271 1321 aaKnown RBP18.01■□□□□ 0.47
SNX30-201ENST00000374232 DDX49Q9Y6V7 483 aaKnown RBP18■□□□□ 0.47
SNX30-201ENST00000374232 EIF2S2P20042 333 aaKnown RBP18■□□□□ 0.47
SNX30-201ENST00000374232 EXOC6Q8TAG9 804 aa18■□□□□ 0.47
SNX30-201ENST00000374232 TRAK1Q9UPV9 953 aa18■□□□□ 0.47
SNX30-201ENST00000374232 PCMTD1Q96MG8 357 aaPredicted RBP17.99■□□□□ 0.47
SNX30-201ENST00000374232 KLHL34Q8N239 644 aa17.99■□□□□ 0.47
SNX30-201ENST00000374232 FAM13BQ9NYF5 915 aa17.99■□□□□ 0.47
SNX30-201ENST00000374232 AMPHP49418 695 aa17.99■□□□□ 0.47
SNX30-201ENST00000374232 TCEAL9Q9UHQ7 104 aa17.99■□□□□ 0.47
SNX30-201ENST00000374232 SKIDA1Q1XH10 827 aa17.98■□□□□ 0.47
SNX30-201ENST00000374232 CRBNQ96SW2 442 aa17.98■□□□□ 0.47
SNX30-201ENST00000374232 CCDC34Q96HJ3 373 aa17.98■□□□□ 0.47
SNX30-201ENST00000374232 MTMR7Q9Y216 660 aa17.98■□□□□ 0.47
SNX30-201ENST00000374232 NGDNQ8NEJ9 315 aaKnown RBP17.97■□□□□ 0.47
SNX30-201ENST00000374232 CENPJQ9HC77 1338 aaPredicted RBP17.97■□□□□ 0.47
SNX30-201ENST00000374232 FAM184AQ8NB25 1140 aa17.97■□□□□ 0.47
SNX30-201ENST00000374232 CFAP44Q96MT7 982 aa17.96■□□□□ 0.47
SNX30-201ENST00000374232 HNRNPMP52272 730 aaKnown RBP eCLIP17.95■□□□□ 0.46
SNX30-201ENST00000374232 COG6Q9Y2V7 657 aa17.95■□□□□ 0.46
SNX30-201ENST00000374232 CCER2I3L3R5 266 aa17.94■□□□□ 0.46
SNX30-201ENST00000374232 MPHOSPH9Q99550 1183 aa17.94■□□□□ 0.46
SNX30-201ENST00000374232 TSR1Q2NL82 804 aaKnown RBP17.94■□□□□ 0.46
SNX30-201ENST00000374232 WRNQ14191 1432 aaPredicted RBP eCLIP17.93■□□□□ 0.46
SNX30-201ENST00000374232 GOLGA6L19H0YKK7 550 aa17.93■□□□□ 0.46
SNX30-201ENST00000374232 ST18O60284 1047 aa17.93■□□□□ 0.46
SNX30-201ENST00000374232 SYTL4Q96C24 671 aaPredicted RBP17.92■□□□□ 0.46
SNX30-201ENST00000374232 FYB1O15117 783 aa17.92■□□□□ 0.46
SNX30-201ENST00000374232 TTLL5Q6EMB2 1281 aa17.91■□□□□ 0.46
SNX30-201ENST00000374232 APPP05067 770 aa17.91■□□□□ 0.46
SNX30-201ENST00000374232 EVA1CP58658 441 aa17.91■□□□□ 0.46
SNX30-201ENST00000374232 BECN2A8MW95 431 aa17.9■□□□□ 0.46
SNX30-201ENST00000374232 TRIM34Q9BYJ4 488 aa17.9■□□□□ 0.46
SNX30-201ENST00000374232 CTDP1Q9Y5B0 961 aaPredicted RBP17.9■□□□□ 0.46
SNX30-201ENST00000374232 SETD5Q9C0A6 1442 aa17.9■□□□□ 0.46
SNX30-201ENST00000374232 PDE4AP27815 886 aa17.9■□□□□ 0.46
SNX30-201ENST00000374232 AKAP17AQ02040 695 aaKnown RBP17.9■□□□□ 0.46
SNX30-201ENST00000374232 CSPP1Q1MSJ5 1256 aa17.89■□□□□ 0.45
SNX30-201ENST00000374232 SOGA1O94964 1423 aa17.89■□□□□ 0.45
SNX30-201ENST00000374232 ANO2Q9NQ90 1003 aa17.89■□□□□ 0.45
SNX30-201ENST00000374232 NUP155O75694 1391 aa17.88■□□□□ 0.45
SNX30-201ENST00000374232 DHX16O60231 1041 aaKnown RBP17.88■□□□□ 0.45
SNX30-201ENST00000374232 HMMRO75330 724 aa17.88■□□□□ 0.45
SNX30-201ENST00000374232 KIF27Q86VH2 1401 aa17.87■□□□□ 0.45
SNX30-201ENST00000374232 SETQ01105 290 aaPredicted RBP17.87■□□□□ 0.45
SNX30-201ENST00000374232 STK11IPQ8N1F8 1099 aa17.87■□□□□ 0.45
SNX30-201ENST00000374232 RAB3GAP2Q9H2M9 1393 aa17.87■□□□□ 0.45
SNX30-201ENST00000374232 KIF3BO15066 747 aa17.87■□□□□ 0.45
SNX30-201ENST00000374232 MPNDQ8N594 471 aa17.86■□□□□ 0.45
SNX30-201ENST00000374232 PANK3Q9H999 370 aa17.86■□□□□ 0.45
SNX30-201ENST00000374232 GSE1Q14687 1217 aa17.86■□□□□ 0.45
SNX30-201ENST00000374232 HOMER1Q86YM7 354 aa17.85■□□□□ 0.45
SNX30-201ENST00000374232 L3MBTL2Q969R5 705 aa17.85■□□□□ 0.45
SNX30-201ENST00000374232 CWC22Q9HCG8 908 aaKnown RBP17.85■□□□□ 0.45
SNX30-201ENST00000374232 PHF14O94880 888 aa17.85■□□□□ 0.45
SNX30-201ENST00000374232 NAP1L1P55209 391 aaKnown RBP17.84■□□□□ 0.45
SNX30-201ENST00000374232 TNIKQ9UKE5 1360 aa17.84■□□□□ 0.45
SNX30-201ENST00000374232 EEA1Q15075 1411 aa17.84■□□□□ 0.45
SNX30-201ENST00000374232 RALBP1Q15311 655 aa17.83■□□□□ 0.44
SNX30-201ENST00000374232 CEP164Q9UPV0 1460 aa17.83■□□□□ 0.44
SNX30-201ENST00000374232 VPS37CA5D8V6 355 aaPredicted RBP17.82■□□□□ 0.44
SNX30-201ENST00000374232 PHF23Q9BUL5 403 aaPredicted RBP17.82■□□□□ 0.44
SNX30-201ENST00000374232 TPM2P07951 284 aa17.82■□□□□ 0.44
SNX30-201ENST00000374232 BICD2Q8TD16 824 aa17.82■□□□□ 0.44
SNX30-201ENST00000374232 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.81■□□□□ 0.44
SNX30-201ENST00000374232 VPS37DQ86XT2 251 aa17.81■□□□□ 0.44
SNX30-201ENST00000374232 NUTM2GQ5VZR2 741 aa17.81■□□□□ 0.44
SNX30-201ENST00000374232 CCDC27Q2M243 656 aa17.81■□□□□ 0.44
SNX30-201ENST00000374232 DDX11L8A8MPP1 907 aa17.8■□□□□ 0.44
SNX30-201ENST00000374232 ARHGAP35Q9NRY4 1499 aa17.8■□□□□ 0.44
SNX30-201ENST00000374232 FAM177BA6PVY3 158 aa17.79■□□□□ 0.44
SNX30-201ENST00000374232 RNF214Q8ND24 703 aa17.79■□□□□ 0.44
SNX30-201ENST00000374232 MAPK8IP2Q13387 824 aaPredicted RBP17.79■□□□□ 0.44
SNX30-201ENST00000374232 DIAPH3Q9NSV4 1193 aa17.79■□□□□ 0.44
SNX30-201ENST00000374232 NFXL1Q6ZNB6 911 aa17.78■□□□□ 0.44
SNX30-201ENST00000374232 CHMP4CQ96CF2 233 aa17.78■□□□□ 0.44
SNX30-201ENST00000374232 FAM161AQ3B820 660 aa17.78■□□□□ 0.44
SNX30-201ENST00000374232 ST20-MTHFSA0A0A6YYL1 179 aa17.78■□□□□ 0.44
SNX30-201ENST00000374232 AIMP1Q12904 312 aaKnown RBP17.78■□□□□ 0.44
SNX30-201ENST00000374232 TPM1P09493 284 aa17.78■□□□□ 0.44
SNX30-201ENST00000374232 SYNE3Q6ZMZ3 975 aa17.78■□□□□ 0.44
SNX30-201ENST00000374232 MEX3CQ5U5Q3 659 aaKnown RBP17.77■□□□□ 0.44
SNX30-201ENST00000374232 NOL10Q9BSC4 688 aaKnown RBP17.77■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms