RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 FAM161AQ3B820 660 aa13.55□□□□□ -0.24
TRERF1-203ENST00000372917 MAP3K1Q13233 1512 aa13.54□□□□□ -0.24
TRERF1-203ENST00000372917 RRP7BPQ9NSQ0 103 aa13.54□□□□□ -0.24
TRERF1-203ENST00000372917 TAF3Q5VWG9 929 aa13.54□□□□□ -0.24
TRERF1-203ENST00000372917 PRKRIP1Q9H875 184 aaPredicted RBP13.54□□□□□ -0.24
TRERF1-203ENST00000372917 BCCIPQ9P287 314 aaKnown RBP eCLIP13.54□□□□□ -0.24
TRERF1-203ENST00000372917 TRAK2O60296 914 aa13.53□□□□□ -0.24
TRERF1-203ENST00000372917 RNF216Q9NWF9 866 aaPredicted RBP13.53□□□□□ -0.24
TRERF1-203ENST00000372917 KCNG1Q9UIX4 513 aa13.53□□□□□ -0.24
TRERF1-203ENST00000372917 EIF4G2P78344 907 aaKnown RBP eCLIP13.52□□□□□ -0.24
TRERF1-203ENST00000372917 ZSCAN30Q86W11 494 aa13.52□□□□□ -0.24
TRERF1-203ENST00000372917 ZBTB9Q96C00 473 aa13.52□□□□□ -0.24
TRERF1-203ENST00000372917 PLPPR3Q6T4P5 718 aa13.52□□□□□ -0.25
TRERF1-203ENST00000372917 ZNF771Q7L3S4 317 aaPredicted RBP13.52□□□□□ -0.25
TRERF1-203ENST00000372917 PATL2C9JE40 543 aaKnown RBP13.51□□□□□ -0.25
TRERF1-203ENST00000372917 ZBTB7CA1YPR0 619 aa13.51□□□□□ -0.25
TRERF1-203ENST00000372917 KCNJ4P48050 445 aa13.51□□□□□ -0.25
TRERF1-203ENST00000372917 HDAC5Q9UQL6 1122 aa13.51□□□□□ -0.25
TRERF1-203ENST00000372917 TERF1P54274 439 aa13.5□□□□□ -0.25
TRERF1-203ENST00000372917 CHMP4CQ96CF2 233 aa13.5□□□□□ -0.25
TRERF1-203ENST00000372917 DYNC1I1O14576 645 aa13.5□□□□□ -0.25
TRERF1-203ENST00000372917 CARMIL1Q5VZK9 1371 aa13.5□□□□□ -0.25
TRERF1-203ENST00000372917 C14orf37Q86TY3 774 aa13.49□□□□□ -0.25
TRERF1-203ENST00000372917 MCM4P33991 863 aa13.49□□□□□ -0.25
TRERF1-203ENST00000372917 XPCQ01831 940 aaPredicted RBP13.48□□□□□ -0.25
TRERF1-203ENST00000372917 MYCNP04198 464 aaPredicted RBP13.48□□□□□ -0.25
TRERF1-203ENST00000372917 HSPA5P11021 654 aaKnown RBP13.47□□□□□ -0.25
TRERF1-203ENST00000372917 IRX5P78411 483 aaPredicted RBP13.47□□□□□ -0.25
TRERF1-203ENST00000372917 RCAN3Q9UKA8 241 aa13.47□□□□□ -0.25
TRERF1-203ENST00000372917 MTUS2Q5JR59 1369 aa13.46□□□□□ -0.25
TRERF1-203ENST00000372917 CUX1P39880 1505 aa13.46□□□□□ -0.25
TRERF1-203ENST00000372917 PLIN1O60240 522 aa13.46□□□□□ -0.26
TRERF1-203ENST00000372917 C8orf34Q49A92 452 aa13.46□□□□□ -0.26
TRERF1-203ENST00000372917 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.46□□□□□ -0.26
TRERF1-203ENST00000372917 CCDC18Q5T9S5 1454 aa13.46□□□□□ -0.26
TRERF1-203ENST00000372917 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.45□□□□□ -0.26
TRERF1-203ENST00000372917 DNAJC2Q99543 621 aaKnown RBP13.45□□□□□ -0.26
TRERF1-203ENST00000372917 SPDYE4A6NLX3 237 aa13.45□□□□□ -0.26
TRERF1-203ENST00000372917 NGEFQ8N5V2 710 aa13.44□□□□□ -0.26
TRERF1-203ENST00000372917 ZNF777Q9ULD5 760 aaPredicted RBP13.44□□□□□ -0.26
TRERF1-203ENST00000372917 UACAQ9BZF9 1416 aa13.43□□□□□ -0.26
TRERF1-203ENST00000372917 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP13.43□□□□□ -0.26
TRERF1-203ENST00000372917 FAM193AP78312 1265 aa13.43□□□□□ -0.26
TRERF1-203ENST00000372917 IGF1RP08069 1367 aa13.43□□□□□ -0.26
TRERF1-203ENST00000372917 CCDC173Q0VFZ6 552 aa13.42□□□□□ -0.26
TRERF1-203ENST00000372917 CRBNQ96SW2 442 aa13.42□□□□□ -0.26
TRERF1-203ENST00000372917 CLGNO14967 610 aa13.41□□□□□ -0.26
TRERF1-203ENST00000372917 SLC52A1Q9NWF4 448 aa13.41□□□□□ -0.26
TRERF1-203ENST00000372917 TRIM6-TRIM34B2RNG4 842 aa13.4□□□□□ -0.26
TRERF1-203ENST00000372917 TRIM34Q9BYJ4 488 aa13.4□□□□□ -0.26
TRERF1-203ENST00000372917 TSC1Q92574 1164 aa13.4□□□□□ -0.26
TRERF1-203ENST00000372917 VGFO15240 615 aaPredicted RBP13.39□□□□□ -0.27
TRERF1-203ENST00000372917 KTN1Q86UP2 1357 aaKnown RBP13.39□□□□□ -0.27
TRERF1-203ENST00000372917 CNTLNQ9NXG0 1405 aa13.39□□□□□ -0.27
TRERF1-203ENST00000372917 DNAJC5BQ9UF47 199 aa13.39□□□□□ -0.27
TRERF1-203ENST00000372917 FMN1Q68DA7 1419 aa13.39□□□□□ -0.27
TRERF1-203ENST00000372917 NASPP49321 788 aaPredicted RBP13.39□□□□□ -0.27
TRERF1-203ENST00000372917 ATP2B3Q16720 1220 aa13.39□□□□□ -0.27
TRERF1-203ENST00000372917 SASS6Q6UVJ0 657 aa13.39□□□□□ -0.27
TRERF1-203ENST00000372917 FGD6Q6ZV73 1430 aa13.38□□□□□ -0.27
TRERF1-203ENST00000372917 GAS2L3Q86XJ1 694 aa13.38□□□□□ -0.27
TRERF1-203ENST00000372917 ISY1Q9ULR0 285 aaKnown RBP13.38□□□□□ -0.27
TRERF1-203ENST00000372917 JARID2Q92833 1246 aaPredicted RBP13.38□□□□□ -0.27
TRERF1-203ENST00000372917 FHOD3Q2V2M9 1422 aa13.37□□□□□ -0.27
TRERF1-203ENST00000372917 HSP90B1P14625 803 aaKnown RBP13.36□□□□□ -0.27
TRERF1-203ENST00000372917 CSPP1Q1MSJ5 1256 aa13.36□□□□□ -0.27
TRERF1-203ENST00000372917 CNKSR2Q8WXI2 1034 aa13.36□□□□□ -0.27
TRERF1-203ENST00000372917 TRERF1Q96PN7 1200 aa13.35□□□□□ -0.27
TRERF1-203ENST00000372917 KDM2AQ9Y2K7 1162 aa13.35□□□□□ -0.27
TRERF1-203ENST00000372917 HFM1A2PYH4 1435 aa13.35□□□□□ -0.27
TRERF1-203ENST00000372917 PTMSP20962 102 aa13.35□□□□□ -0.27
TRERF1-203ENST00000372917 ANTXR1Q9H6X2 564 aa13.35□□□□□ -0.27
TRERF1-203ENST00000372917 FYCO1Q9BQS8 1478 aa13.35□□□□□ -0.27
TRERF1-203ENST00000372917 TNNT3P45378 269 aaPredicted RBP13.35□□□□□ -0.27
TRERF1-203ENST00000372917 PANK3Q9H999 370 aa13.35□□□□□ -0.27
TRERF1-203ENST00000372917 CC2D2AQ9P2K1 1620 aa13.35□□□□□ -0.27
TRERF1-203ENST00000372917 SOX12O15370 315 aa13.34□□□□□ -0.27
TRERF1-203ENST00000372917 PCF11O94913 1555 aaKnown RBP13.34□□□□□ -0.27
TRERF1-203ENST00000372917 FAM177BA6PVY3 158 aa13.34□□□□□ -0.27
TRERF1-203ENST00000372917 DDX11L8A8MPP1 907 aa13.34□□□□□ -0.27
TRERF1-203ENST00000372917 TMED8Q6PL24 325 aaPredicted RBP13.33□□□□□ -0.27
TRERF1-203ENST00000372917 CASKIN1Q8WXD9 1431 aa13.33□□□□□ -0.28
TRERF1-203ENST00000372917 SLC4A1APQ9BWU0 796 aaKnown RBP13.33□□□□□ -0.28
TRERF1-203ENST00000372917 CFAP43Q8NDM7 1665 aa13.33□□□□□ -0.28
TRERF1-203ENST00000372917 CC2D1BQ5T0F9 858 aaKnown RBP13.33□□□□□ -0.28
TRERF1-203ENST00000372917 CENPQQ7L2Z9 268 aaPredicted RBP13.33□□□□□ -0.28
TRERF1-203ENST00000372917 FBLN2P98095 1184 aa13.32□□□□□ -0.28
TRERF1-203ENST00000372917 UPF2Q9HAU5 1272 aaKnown RBP13.32□□□□□ -0.28
TRERF1-203ENST00000372917 CCDC7Q96M83 1385 aa13.32□□□□□ -0.28
TRERF1-203ENST00000372917 TIGD1Q96MW7 591 aa13.31□□□□□ -0.28
TRERF1-203ENST00000372917 CFTRP13569 1480 aa13.31□□□□□ -0.28
TRERF1-203ENST00000372917 CCDC66A2RUB6 948 aa13.31□□□□□ -0.28
TRERF1-203ENST00000372917 NBPF1Q3BBV0 1214 aa13.31□□□□□ -0.28
TRERF1-203ENST00000372917 CHMP5Q9NZZ3 219 aa13.31□□□□□ -0.28
TRERF1-203ENST00000372917 TBC1D2Q9BYX2 928 aa13.3□□□□□ -0.28
TRERF1-203ENST00000372917 PPP1R9BQ96SB3 815 aa13.3□□□□□ -0.28
TRERF1-203ENST00000372917 PTMAP06454 111 aaKnown RBP13.29□□□□□ -0.28
TRERF1-203ENST00000372917 PRR29P0C7W0 189 aa13.29□□□□□ -0.28
TRERF1-203ENST00000372917 FGD5Q6ZNL6 1462 aa13.29□□□□□ -0.28
TRERF1-203ENST00000372917 LOC102724159A0A0B4J2E5 919 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms