RNA–Protein interactions for RNA: ENST00000372237.7

TMEM53-202, Transcript of transmembrane protein 53, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM53, Length 2,310 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-202ENST00000372237 CDC42BPBQ9Y5S2 1711 aa25.96■■□□□ 1.75
TMEM53-202ENST00000372237 FANCIQ9NVI1 1328 aa25.96■■□□□ 1.75
TMEM53-202ENST00000372237 TTC37Q6PGP7 1564 aa25.96■■□□□ 1.75
TMEM53-202ENST00000372237 ST20-MTHFSA0A0A6YYL1 179 aa25.96■■□□□ 1.75
TMEM53-202ENST00000372237 SAMD9LQ8IVG5 1584 aa25.95■■□□□ 1.74
TMEM53-202ENST00000372237 TMC1Q8TDI8 760 aa25.94■■□□□ 1.74
TMEM53-202ENST00000372237 ZCCHC11Q5TAX3 1644 aaKnown RBP25.94■■□□□ 1.74
TMEM53-202ENST00000372237 NUDCQ9Y266 331 aa25.93■■□□□ 1.74
TMEM53-202ENST00000372237 FAM135AQ9P2D6 1515 aa25.93■■□□□ 1.74
TMEM53-202ENST00000372237 RSPH4AQ5TD94 716 aa25.92■■□□□ 1.74
TMEM53-202ENST00000372237 PNISRQ8TF01 805 aaKnown RBP25.92■■□□□ 1.74
TMEM53-202ENST00000372237 MSH5O43196 834 aa25.91■■□□□ 1.74
TMEM53-202ENST00000372237 OSCARQ8IYS5 282 aa25.91■■□□□ 1.74
TMEM53-202ENST00000372237 ARHGAP5Q13017 1502 aa25.9■■□□□ 1.74
TMEM53-202ENST00000372237 CCDC144AA2RUR9 1427 aa25.86■■□□□ 1.73
TMEM53-202ENST00000372237 KTN1Q86UP2 1357 aaKnown RBP25.85■■□□□ 1.73
TMEM53-202ENST00000372237 PLCH2O75038 1416 aa25.84■■□□□ 1.73
TMEM53-202ENST00000372237 MYBBP1AQ9BQG0 1328 aaKnown RBP25.84■■□□□ 1.73
TMEM53-202ENST00000372237 SYCP2Q9BX26 1530 aa25.84■■□□□ 1.73
TMEM53-202ENST00000372237 RALBP1Q15311 655 aa25.83■■□□□ 1.73
TMEM53-202ENST00000372237 E9PCH4 1651 aa25.83■■□□□ 1.73
TMEM53-202ENST00000372237 BRD4O60885 1362 aaPredicted RBP25.82■■□□□ 1.72
TMEM53-202ENST00000372237 RNF123Q5XPI4 1314 aa25.82■■□□□ 1.72
TMEM53-202ENST00000372237 TRPM1Q7Z4N2 1603 aa25.82■■□□□ 1.72
TMEM53-202ENST00000372237 MYO5CQ9NQX4 1742 aa25.82■■□□□ 1.72
TMEM53-202ENST00000372237 PRAG1Q86YV5 1406 aa25.81■■□□□ 1.72
TMEM53-202ENST00000372237 SENP3-EIF4A1A0A087X0R7 540 aa25.81■■□□□ 1.72
TMEM53-202ENST00000372237 LRPPRCP42704 1394 aaKnown RBP25.79■■□□□ 1.72
TMEM53-202ENST00000372237 PLEKHH2Q8IVE3 1493 aa25.79■■□□□ 1.72
TMEM53-202ENST00000372237 RGL3Q3MIN7 710 aa25.79■■□□□ 1.72
TMEM53-202ENST00000372237 EFCAB2Q5VUJ9 269 aa25.79■■□□□ 1.72
TMEM53-202ENST00000372237 UNC13BO14795 1591 aa25.78■■□□□ 1.72
TMEM53-202ENST00000372237 MAST1Q9Y2H9 1570 aa25.78■■□□□ 1.72
TMEM53-202ENST00000372237 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.77■■□□□ 1.72
TMEM53-202ENST00000372237 ERICH6Q7L0X2 663 aa25.76■■□□□ 1.71
TMEM53-202ENST00000372237 WDR7Q9Y4E6 1490 aa25.74■■□□□ 1.71
TMEM53-202ENST00000372237 PLA2R1Q13018 1463 aa25.73■■□□□ 1.71
TMEM53-202ENST00000372237 CCDC136Q96JN2 1154 aa25.73■■□□□ 1.71
TMEM53-202ENST00000372237 NBPF1Q3BBV0 1214 aa25.72■■□□□ 1.71
TMEM53-202ENST00000372237 A2MP01023 1474 aa25.72■■□□□ 1.71
TMEM53-202ENST00000372237 PLXNC1O60486 1568 aa25.71■■□□□ 1.71
TMEM53-202ENST00000372237 IQGAP3Q86VI3 1631 aa25.7■■□□□ 1.7
TMEM53-202ENST00000372237 GPRASP1Q5JY77 1395 aa25.7■■□□□ 1.7
TMEM53-202ENST00000372237 NLRP13Q86W25 1043 aa25.7■■□□□ 1.7
TMEM53-202ENST00000372237 PARD3Q8TEW0 1356 aa25.68■■□□□ 1.7
TMEM53-202ENST00000372237 LAMC1P11047 1609 aa25.66■■□□□ 1.7
TMEM53-202ENST00000372237 PRDM15P57071 1507 aaPredicted RBP25.65■■□□□ 1.7
TMEM53-202ENST00000372237 ARAP3Q8WWN8 1544 aa25.65■■□□□ 1.7
TMEM53-202ENST00000372237 ABCC1P33527 1531 aa25.65■■□□□ 1.7
TMEM53-202ENST00000372237 DUOX2Q9NRD8 1548 aa25.65■■□□□ 1.7
TMEM53-202ENST00000372237 ASXL2Q76L83 1435 aa25.65■■□□□ 1.7
TMEM53-202ENST00000372237 COL17A1Q9UMD9 1497 aaPredicted RBP25.65■■□□□ 1.7
TMEM53-202ENST00000372237 PER1O15534 1290 aaPredicted RBP25.64■■□□□ 1.7
TMEM53-202ENST00000372237 TRAPPC8Q9Y2L5 1435 aa25.64■■□□□ 1.69
TMEM53-202ENST00000372237 EIF2AK4Q9P2K8 1649 aaKnown RBP25.64■■□□□ 1.69
TMEM53-202ENST00000372237 TESK2Q96S53 571 aa25.61■■□□□ 1.69
TMEM53-202ENST00000372237 DISP3Q9P2K9 1392 aa25.6■■□□□ 1.69
TMEM53-202ENST00000372237 ERBINQ96RT1 1412 aa25.6■■□□□ 1.69
TMEM53-202ENST00000372237 ATP10AO60312 1499 aa25.6■■□□□ 1.69
TMEM53-202ENST00000372237 NPM1P06748 294 aaKnown RBP eCLIP25.59■■□□□ 1.69
TMEM53-202ENST00000372237 SALL2Q9Y467 1007 aaPredicted RBP25.59■■□□□ 1.69
TMEM53-202ENST00000372237 WASHC2CQ9Y4E1 1318 aa25.59■■□□□ 1.69
TMEM53-202ENST00000372237 MAGI2Q86UL8 1455 aa25.59■■□□□ 1.69
TMEM53-202ENST00000372237 AFAP1Q8N556 730 aa25.58■■□□□ 1.69
TMEM53-202ENST00000372237 ABCA9Q8IUA7 1624 aa25.58■■□□□ 1.68
TMEM53-202ENST00000372237 RRP1P56182 461 aaKnown RBP25.57■■□□□ 1.68
TMEM53-202ENST00000372237 TMF1P82094 1093 aa25.56■■□□□ 1.68
TMEM53-202ENST00000372237 PDE3BQ13370 1112 aa25.56■■□□□ 1.68
TMEM53-202ENST00000372237 CC2D1BQ5T0F9 858 aaKnown RBP25.56■■□□□ 1.68
TMEM53-202ENST00000372237 FANCAO15360 1455 aa25.56■■□□□ 1.68
TMEM53-202ENST00000372237 RCAN3Q9UKA8 241 aa25.55■■□□□ 1.68
TMEM53-202ENST00000372237 PANK3Q9H999 370 aa25.54■■□□□ 1.68
TMEM53-202ENST00000372237 SPAG9O60271 1321 aaKnown RBP25.54■■□□□ 1.68
TMEM53-202ENST00000372237 RTEL1-TNFRSF6BF6WH68 1400 aa25.51■■□□□ 1.67
TMEM53-202ENST00000372237 RNF17Q9BXT8 1623 aaKnown RBP25.49■■□□□ 1.67
TMEM53-202ENST00000372237 EXOC6Q8TAG9 804 aa25.47■■□□□ 1.67
TMEM53-202ENST00000372237 SCAPERQ9BY12 1400 aa25.46■■□□□ 1.67
TMEM53-202ENST00000372237 INSRP06213 1382 aa25.46■■□□□ 1.67
TMEM53-202ENST00000372237 ADGRL1O94910 1474 aa25.46■■□□□ 1.67
TMEM53-202ENST00000372237 ZMYM4Q5VZL5 1548 aa25.45■■□□□ 1.66
TMEM53-202ENST00000372237 ZFYVE16Q7Z3T8 1539 aa25.45■■□□□ 1.66
TMEM53-202ENST00000372237 NOP58Q9Y2X3 529 aaKnown RBP25.45■■□□□ 1.66
TMEM53-202ENST00000372237 BLMP54132 1417 aaPredicted RBP25.45■■□□□ 1.66
TMEM53-202ENST00000372237 CDCA7LQ96GN5 454 aa25.45■■□□□ 1.66
TMEM53-202ENST00000372237 ANP32AP39687 249 aaKnown RBP25.42■■□□□ 1.66
TMEM53-202ENST00000372237 MADDQ8WXG6 1647 aa25.41■■□□□ 1.66
TMEM53-202ENST00000372237 CD109Q6YHK3 1445 aa25.38■■□□□ 1.65
TMEM53-202ENST00000372237 IQGAP1P46940 1657 aa25.38■■□□□ 1.65
TMEM53-202ENST00000372237 TRPM2O94759 1503 aa25.37■■□□□ 1.65
TMEM53-202ENST00000372237 ATP7AQ04656 1500 aa25.37■■□□□ 1.65
TMEM53-202ENST00000372237 KNSTRNQ9Y448 316 aa25.36■■□□□ 1.65
TMEM53-202ENST00000372237 CEP152O94986 1710 aa25.35■■□□□ 1.65
TMEM53-202ENST00000372237 SPHKAPQ2M3C7 1700 aa25.35■■□□□ 1.65
TMEM53-202ENST00000372237 INO80Q9ULG1 1556 aaPredicted RBP25.35■■□□□ 1.65
TMEM53-202ENST00000372237 IPO9Q96P70 1041 aaKnown RBP25.35■■□□□ 1.65
TMEM53-202ENST00000372237 MYT1LQ9UL68 1186 aa25.34■■□□□ 1.65
TMEM53-202ENST00000372237 PAK3O75914 559 aaPredicted RBP25.34■■□□□ 1.65
TMEM53-202ENST00000372237 CDCA8Q53HL2 280 aa25.33■■□□□ 1.65
TMEM53-202ENST00000372237 STAC3Q96MF2 364 aa25.33■■□□□ 1.65
TMEM53-202ENST00000372237 TCERG1O14776 1098 aaKnown RBP25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms