RNA–Protein interactions for RNA: ENST00000370021.1

PRPF38B-201, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best) BASIC

Gene PRPF38B, Length 3,728 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-201ENST00000370021 UBE2Q2Q8WVN8 375 aa13.43□□□□□ -0.26
PRPF38B-201ENST00000370021 ADAMTS8Q9UP79 889 aa13.43□□□□□ -0.26
PRPF38B-201ENST00000370021 PBRM1Q86U86 1689 aa13.43□□□□□ -0.26
PRPF38B-201ENST00000370021 TRIM44Q96DX7 344 aaPredicted RBP13.43□□□□□ -0.26
PRPF38B-201ENST00000370021 FOXD4L1Q9NU39 408 aa13.42□□□□□ -0.26
PRPF38B-201ENST00000370021 COG6Q9Y2V7 657 aa13.42□□□□□ -0.26
PRPF38B-201ENST00000370021 ROCK2O75116 1388 aaKnown RBP13.42□□□□□ -0.26
PRPF38B-201ENST00000370021 UGGT2Q9NYU1 1516 aa13.42□□□□□ -0.26
PRPF38B-201ENST00000370021 CENPQQ7L2Z9 268 aaPredicted RBP13.41□□□□□ -0.26
PRPF38B-201ENST00000370021 NUP155O75694 1391 aa13.41□□□□□ -0.26
PRPF38B-201ENST00000370021 PDE3BQ13370 1112 aa13.41□□□□□ -0.26
PRPF38B-201ENST00000370021 DENND4BO75064 1496 aaPredicted RBP13.41□□□□□ -0.26
PRPF38B-201ENST00000370021 GOLGA2Q08379 1002 aa13.4□□□□□ -0.26
PRPF38B-201ENST00000370021 HSP90AA2PQ14568 343 aaPredicted RBP13.4□□□□□ -0.26
PRPF38B-201ENST00000370021 NBPF1Q3BBV0 1214 aa13.4□□□□□ -0.26
PRPF38B-201ENST00000370021 EHBP1L1Q8N3D4 1523 aa13.4□□□□□ -0.27
PRPF38B-201ENST00000370021 BCAR3O75815 825 aa13.39□□□□□ -0.27
PRPF38B-201ENST00000370021 RRP7AQ9Y3A4 280 aaKnown RBP13.39□□□□□ -0.27
PRPF38B-201ENST00000370021 HECW1Q76N89 1606 aa13.39□□□□□ -0.27
PRPF38B-201ENST00000370021 GOLGA6L3A6NEY3 463 aa13.39□□□□□ -0.27
PRPF38B-201ENST00000370021 PKNOX2Q96KN3 472 aa13.38□□□□□ -0.27
PRPF38B-201ENST00000370021 WASHC2CQ9Y4E1 1318 aa13.38□□□□□ -0.27
PRPF38B-201ENST00000370021 APAF1O14727 1248 aa13.38□□□□□ -0.27
PRPF38B-201ENST00000370021 NCLP19338 710 aaKnown RBP13.38□□□□□ -0.27
PRPF38B-201ENST00000370021 MFAP1P55081 439 aaKnown RBP13.38□□□□□ -0.27
PRPF38B-201ENST00000370021 TPRNQ4KMQ1 711 aa13.38□□□□□ -0.27
PRPF38B-201ENST00000370021 TCOF1Q13428 1488 aaKnown RBP13.37□□□□□ -0.27
PRPF38B-201ENST00000370021 PANK1Q8TE04 598 aa13.37□□□□□ -0.27
PRPF38B-201ENST00000370021 L1TD1Q5T7N2 865 aaKnown RBP13.37□□□□□ -0.27
PRPF38B-201ENST00000370021 GAPVD1Q14C86 1478 aa13.36□□□□□ -0.27
PRPF38B-201ENST00000370021 KDM6BO15054 1643 aa13.36□□□□□ -0.27
PRPF38B-201ENST00000370021 FAM43AQ8N2R8 423 aa13.35□□□□□ -0.27
PRPF38B-201ENST00000370021 TMF1P82094 1093 aa13.33□□□□□ -0.28
PRPF38B-201ENST00000370021 ANKRD30BQ9BXX2 1392 aa13.33□□□□□ -0.28
PRPF38B-201ENST00000370021 CHGAP10645 457 aaKnown RBP13.33□□□□□ -0.28
PRPF38B-201ENST00000370021 HNRNPMP52272 730 aaKnown RBP eCLIP13.33□□□□□ -0.28
PRPF38B-201ENST00000370021 ADAMTS12P58397 1594 aa13.33□□□□□ -0.28
PRPF38B-201ENST00000370021 PANK2Q9BZ23 570 aa13.33□□□□□ -0.28
PRPF38B-201ENST00000370021 RNF123Q5XPI4 1314 aa13.32□□□□□ -0.28
PRPF38B-201ENST00000370021 SEC24BO95487 1268 aa13.32□□□□□ -0.28
PRPF38B-201ENST00000370021 BRD4O60885 1362 aaPredicted RBP13.32□□□□□ -0.28
PRPF38B-201ENST00000370021 ANP32BQ92688 251 aaKnown RBP13.31□□□□□ -0.28
PRPF38B-201ENST00000370021 RRAGDQ9NQL2 400 aaPredicted RBP13.31□□□□□ -0.28
PRPF38B-201ENST00000370021 MYH16Q9H6N6 1097 aa13.31□□□□□ -0.28
PRPF38B-201ENST00000370021 DHX29Q7Z478 1369 aaKnown RBP13.31□□□□□ -0.28
PRPF38B-201ENST00000370021 C8orf34Q49A92 452 aa13.3□□□□□ -0.28
PRPF38B-201ENST00000370021 POLR1AO95602 1720 aaPredicted RBP13.3□□□□□ -0.28
PRPF38B-201ENST00000370021 WDR62O43379 1518 aa13.3□□□□□ -0.28
PRPF38B-201ENST00000370021 FTSJ3Q8IY81 847 aaKnown RBP13.29□□□□□ -0.28
PRPF38B-201ENST00000370021 IQGAP2Q13576 1575 aa13.28□□□□□ -0.28
PRPF38B-201ENST00000370021 IGHDP01880 384 aa13.28□□□□□ -0.28
PRPF38B-201ENST00000370021 PLEKHD1A6NEE1 506 aa13.27□□□□□ -0.29
PRPF38B-201ENST00000370021 HSP90AB1P08238 724 aaKnown RBP13.27□□□□□ -0.29
PRPF38B-201ENST00000370021 ZMYND15Q9H091 742 aa13.27□□□□□ -0.29
PRPF38B-201ENST00000370021 HSCBQ8IWL3 235 aa13.25□□□□□ -0.29
PRPF38B-201ENST00000370021 EPRSP07814 1512 aaKnown RBP13.25□□□□□ -0.29
PRPF38B-201ENST00000370021 CENPJQ9HC77 1338 aaPredicted RBP13.24□□□□□ -0.29
PRPF38B-201ENST00000370021 PDS5BQ9NTI5 1447 aa13.24□□□□□ -0.29
PRPF38B-201ENST00000370021 TRAK2O60296 914 aa13.23□□□□□ -0.29
PRPF38B-201ENST00000370021 RBM10P98175 930 aaKnown RBP13.23□□□□□ -0.29
PRPF38B-201ENST00000370021 XRCC6P12956 609 aaKnown RBP eCLIP13.22□□□□□ -0.291e-12■■□□□ 12.4
PRPF38B-201ENST00000370021 DNMT1P26358 1616 aaKnown RBP13.22□□□□□ -0.29
PRPF38B-201ENST00000370021 CDK13Q14004 1512 aaKnown RBP13.22□□□□□ -0.29
PRPF38B-201ENST00000370021 DUSP27Q5VZP5 1158 aa13.21□□□□□ -0.29
PRPF38B-201ENST00000370021 RPRD2Q5VT52 1461 aaKnown RBP13.21□□□□□ -0.29
PRPF38B-201ENST00000370021 PPP2R1AP30153 589 aa13.21□□□□□ -0.29
PRPF38B-201ENST00000370021 CHMP7Q8WUX9 453 aaPredicted RBP13.2□□□□□ -0.3
PRPF38B-201ENST00000370021 MIA2Q96PC5 1412 aa13.2□□□□□ -0.3
PRPF38B-201ENST00000370021 SPINK5Q9NQ38 1064 aaPredicted RBP13.2□□□□□ -0.3
PRPF38B-201ENST00000370021 FAM13BQ9NYF5 915 aa13.2□□□□□ -0.3
PRPF38B-201ENST00000370021 FOXD4L5Q5VV16 416 aaPredicted RBP13.2□□□□□ -0.3
PRPF38B-201ENST00000370021 FOXD4L4Q8WXT5 416 aaPredicted RBP13.2□□□□□ -0.3
PRPF38B-201ENST00000370021 PDZRN3Q9UPQ7 1066 aa13.2□□□□□ -0.3
PRPF38B-201ENST00000370021 ANKRD30AQ9BXX3 1397 aa13.19□□□□□ -0.3
PRPF38B-201ENST00000370021 KIAA0556O60303 1618 aa13.19□□□□□ -0.3
PRPF38B-201ENST00000370021 ITPRIPQ8IWB1 547 aa13.19□□□□□ -0.3
PRPF38B-201ENST00000370021 TBC1D2Q9BYX2 928 aa13.19□□□□□ -0.3
PRPF38B-201ENST00000370021 U2SURPO15042 1029 aaKnown RBP13.19□□□□□ -0.3
PRPF38B-201ENST00000370021 TNNQ9UQP3 1299 aa13.19□□□□□ -0.3
PRPF38B-201ENST00000370021 MCM4P33991 863 aa13.18□□□□□ -0.3
PRPF38B-201ENST00000370021 CROCC2H7BZ55 1655 aa13.18□□□□□ -0.3
PRPF38B-201ENST00000370021 APBB1O00213 710 aa13.17□□□□□ -0.3
PRPF38B-201ENST00000370021 MSNP26038 577 aaKnown RBP13.17□□□□□ -0.3
PRPF38B-201ENST00000370021 RWDD1Q9H446 243 aaPredicted RBP13.17□□□□□ -0.3
PRPF38B-201ENST00000370021 DISP1Q96F81 1524 aa13.17□□□□□ -0.3
PRPF38B-201ENST00000370021 C22orf23Q9BZE7 217 aa13.17□□□□□ -0.3
PRPF38B-201ENST00000370021 SAFB2Q14151 953 aaKnown RBP eCLIP13.16□□□□□ -0.35e-7■□□□□ 8.3
PRPF38B-201ENST00000370021 DNTTIP2Q5QJE6 756 aaKnown RBP13.16□□□□□ -0.3
PRPF38B-201ENST00000370021 MAPK8IP3Q9UPT6 1336 aa13.16□□□□□ -0.3
PRPF38B-201ENST00000370021 TEX14Q8IWB6 1497 aa13.15□□□□□ -0.3
PRPF38B-201ENST00000370021 ADCY10Q96PN6 1610 aa13.15□□□□□ -0.3
PRPF38B-201ENST00000370021 MORC1Q86VD1 984 aa13.15□□□□□ -0.3
PRPF38B-201ENST00000370021 DAPK1P53355 1430 aa13.15□□□□□ -0.3
PRPF38B-201ENST00000370021 SPATA31E1Q6ZUB1 1445 aa13.15□□□□□ -0.3
PRPF38B-201ENST00000370021 MPNDQ8N594 471 aa13.15□□□□□ -0.3
PRPF38B-201ENST00000370021 CHMP5Q9NZZ3 219 aa13.15□□□□□ -0.3
PRPF38B-201ENST00000370021 ADGBQ8N7X0 1667 aa13.15□□□□□ -0.3
PRPF38B-201ENST00000370021 ESPNB1AK53 854 aa13.14□□□□□ -0.31
PRPF38B-201ENST00000370021 GOLGA6L22H0YM25 854 aa13.14□□□□□ -0.31
PRPF38B-201ENST00000370021 U2AF1L5P0DN76 240 aaPredicted RBP13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms