RNA–Protein interactions for RNA: ENST00000369454.3

RAB39B-201, Transcript of RAB39B, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39B, Length 3,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39B-201ENST00000369454 RALGAPBQ86X10 1494 aa15.6■□□□□ 0.09
RAB39B-201ENST00000369454 CC2D1BQ5T0F9 858 aaKnown RBP15.6■□□□□ 0.09
RAB39B-201ENST00000369454 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.59■□□□□ 0.09
RAB39B-201ENST00000369454 EFCAB2Q5VUJ9 269 aa15.59■□□□□ 0.09
RAB39B-201ENST00000369454 PPP4R2Q9NY27 417 aa15.58■□□□□ 0.08
RAB39B-201ENST00000369454 UHRF1BP1Q6BDS2 1440 aa15.58■□□□□ 0.08
RAB39B-201ENST00000369454 PNISRQ8TF01 805 aaKnown RBP15.57■□□□□ 0.08
RAB39B-201ENST00000369454 PREX2Q70Z35 1606 aa15.57■□□□□ 0.08
RAB39B-201ENST00000369454 ARHGEF5Q12774 1597 aa15.57■□□□□ 0.08
RAB39B-201ENST00000369454 ARHGEF12Q9NZN5 1544 aa15.55■□□□□ 0.08
RAB39B-201ENST00000369454 PLA2R1Q13018 1463 aa15.54■□□□□ 0.08
RAB39B-201ENST00000369454 ARID4BQ4LE39 1312 aaPredicted RBP15.53■□□□□ 0.08
RAB39B-201ENST00000369454 SPAG9O60271 1321 aaKnown RBP15.53■□□□□ 0.08
RAB39B-201ENST00000369454 ABCC2Q92887 1545 aa15.53■□□□□ 0.08
RAB39B-201ENST00000369454 PRAG1Q86YV5 1406 aa15.52■□□□□ 0.08
RAB39B-201ENST00000369454 TRAPPC8Q9Y2L5 1435 aa15.52■□□□□ 0.08
RAB39B-201ENST00000369454 NUDCQ9Y266 331 aa15.52■□□□□ 0.08
RAB39B-201ENST00000369454 KDM5DQ9BY66 1539 aa15.52■□□□□ 0.08
RAB39B-201ENST00000369454 POLR1AO95602 1720 aaPredicted RBP15.52■□□□□ 0.07
RAB39B-201ENST00000369454 MYBBP1AQ9BQG0 1328 aaKnown RBP15.51■□□□□ 0.07
RAB39B-201ENST00000369454 PANK3Q9H999 370 aa15.51■□□□□ 0.07
RAB39B-201ENST00000369454 A2MP01023 1474 aa15.5■□□□□ 0.07
RAB39B-201ENST00000369454 DISP3Q9P2K9 1392 aa15.5■□□□□ 0.07
RAB39B-201ENST00000369454 ANP32EQ9BTT0 268 aa15.49■□□□□ 0.07
RAB39B-201ENST00000369454 RALBP1Q15311 655 aa15.48■□□□□ 0.07
RAB39B-201ENST00000369454 PLCH2O75038 1416 aa15.48■□□□□ 0.07
RAB39B-201ENST00000369454 KIF3BO15066 747 aa15.48■□□□□ 0.07
RAB39B-201ENST00000369454 KTN1Q86UP2 1357 aaKnown RBP15.47■□□□□ 0.07
RAB39B-201ENST00000369454 CCDC136Q96JN2 1154 aa15.47■□□□□ 0.07
RAB39B-201ENST00000369454 TESK2Q96S53 571 aa15.47■□□□□ 0.07
RAB39B-201ENST00000369454 MYO5CQ9NQX4 1742 aa15.47■□□□□ 0.07
RAB39B-201ENST00000369454 MYT1Q01538 1121 aa15.46■□□□□ 0.07
RAB39B-201ENST00000369454 TMF1P82094 1093 aa15.46■□□□□ 0.06
RAB39B-201ENST00000369454 NLRP13Q86W25 1043 aa15.45■□□□□ 0.06
RAB39B-201ENST00000369454 SHROOM2Q13796 1616 aa15.44■□□□□ 0.06
RAB39B-201ENST00000369454 SMG6Q86US8 1419 aaKnown RBP15.44■□□□□ 0.06
RAB39B-201ENST00000369454 SENP3Q9H4L4 574 aaPredicted RBP15.44■□□□□ 0.06
RAB39B-201ENST00000369454 PER1O15534 1290 aaPredicted RBP15.44■□□□□ 0.06
RAB39B-201ENST00000369454 MSH5O43196 834 aa15.43■□□□□ 0.06
RAB39B-201ENST00000369454 ERICH6BQ5W0A0 696 aa15.43■□□□□ 0.06
RAB39B-201ENST00000369454 CDCA7LQ96GN5 454 aa15.43■□□□□ 0.06
RAB39B-201ENST00000369454 CHGAP10645 457 aaKnown RBP15.43■□□□□ 0.06
RAB39B-201ENST00000369454 ZCCHC11Q5TAX3 1644 aaKnown RBP15.43■□□□□ 0.06
RAB39B-201ENST00000369454 BRD4O60885 1362 aaPredicted RBP15.42■□□□□ 0.06
RAB39B-201ENST00000369454 DUOX2Q9NRD8 1548 aa15.42■□□□□ 0.06
RAB39B-201ENST00000369454 ERBINQ96RT1 1412 aa15.41■□□□□ 0.06
RAB39B-201ENST00000369454 SCAPERQ9BY12 1400 aa15.41■□□□□ 0.06
RAB39B-201ENST00000369454 TRPM1Q7Z4N2 1603 aa15.41■□□□□ 0.06
RAB39B-201ENST00000369454 UNC13BO14795 1591 aa15.4■□□□□ 0.06
RAB39B-201ENST00000369454 ERICH6Q7L0X2 663 aa15.38■□□□□ 0.05
RAB39B-201ENST00000369454 KNSTRNQ9Y448 316 aa15.38■□□□□ 0.05
RAB39B-201ENST00000369454 MAST1Q9Y2H9 1570 aa15.38■□□□□ 0.05
RAB39B-201ENST00000369454 PLIN1O60240 522 aa15.37■□□□□ 0.05
RAB39B-201ENST00000369454 LRPPRCP42704 1394 aaKnown RBP15.37■□□□□ 0.05
RAB39B-201ENST00000369454 PARD3Q8TEW0 1356 aa15.37■□□□□ 0.05
RAB39B-201ENST00000369454 IQGAP3Q86VI3 1631 aa15.37■□□□□ 0.05
RAB39B-201ENST00000369454 GPRASP1Q5JY77 1395 aa15.36■□□□□ 0.05
RAB39B-201ENST00000369454 ABCC1P33527 1531 aa15.36■□□□□ 0.05
RAB39B-201ENST00000369454 RCAN3Q9UKA8 241 aa15.36■□□□□ 0.05
RAB39B-201ENST00000369454 PLXNC1O60486 1568 aa15.36■□□□□ 0.05
RAB39B-201ENST00000369454 CFAP70Q5T0N1 1121 aa15.36■□□□□ 0.05
RAB39B-201ENST00000369454 EXOC6Q8TAG9 804 aa15.36■□□□□ 0.05
RAB39B-201ENST00000369454 COL17A1Q9UMD9 1497 aaPredicted RBP15.35■□□□□ 0.05
RAB39B-201ENST00000369454 FANCAO15360 1455 aa15.35■□□□□ 0.05
RAB39B-201ENST00000369454 GGT6Q6P531 493 aa15.35■□□□□ 0.05
RAB39B-201ENST00000369454 ADAMTS8Q9UP79 889 aa15.34■□□□□ 0.05
RAB39B-201ENST00000369454 KANK1Q14678 1352 aa15.33■□□□□ 0.04
RAB39B-201ENST00000369454 RRP1P56182 461 aaKnown RBP15.33■□□□□ 0.04
RAB39B-201ENST00000369454 CLASP1Q7Z460 1538 aa15.33■□□□□ 0.04
RAB39B-201ENST00000369454 NUTM2DQ5VT03 806 aaPredicted RBP15.32■□□□□ 0.04
RAB39B-201ENST00000369454 NPM1P06748 294 aaKnown RBP eCLIP15.31■□□□□ 0.04
RAB39B-201ENST00000369454 ATP10AO60312 1499 aa15.31■□□□□ 0.04
RAB39B-201ENST00000369454 PRDM15P57071 1507 aaPredicted RBP15.31■□□□□ 0.04
RAB39B-201ENST00000369454 ADGRL1O94910 1474 aa15.31■□□□□ 0.04
RAB39B-201ENST00000369454 WDR7Q9Y4E6 1490 aa15.3■□□□□ 0.04
RAB39B-201ENST00000369454 ADGRF5Q8IZF2 1346 aa15.3■□□□□ 0.04
RAB39B-201ENST00000369454 WDR43Q15061 677 aaKnown RBP eCLIP15.3■□□□□ 0.04
RAB39B-201ENST00000369454 RNF123Q5XPI4 1314 aa15.3■□□□□ 0.04
RAB39B-201ENST00000369454 CCDC146Q8IYE0 955 aa15.3■□□□□ 0.04
RAB39B-201ENST00000369454 UGGT1Q9NYU2 1555 aa15.3■□□□□ 0.04
RAB39B-201ENST00000369454 UHRF1BP1LA0JNW5 1464 aa15.3■□□□□ 0.04
RAB39B-201ENST00000369454 E9PCH4 1651 aa15.29■□□□□ 0.04
RAB39B-201ENST00000369454 MAGI2Q86UL8 1455 aa15.29■□□□□ 0.04
RAB39B-201ENST00000369454 PPP2R1AP30153 589 aa15.29■□□□□ 0.04
RAB39B-201ENST00000369454 ZFYVE16Q7Z3T8 1539 aa15.28■□□□□ 0.04
RAB39B-201ENST00000369454 FANCIQ9NVI1 1328 aa15.28■□□□□ 0.04
RAB39B-201ENST00000369454 TNNT2P45379 298 aaPredicted RBP15.28■□□□□ 0.04
RAB39B-201ENST00000369454 ASXL2Q76L83 1435 aa15.27■□□□□ 0.04
RAB39B-201ENST00000369454 SKAP1Q86WV1 359 aa15.27■□□□□ 0.04
RAB39B-201ENST00000369454 TRAK1Q9UPV9 953 aa15.26■□□□□ 0.03
RAB39B-201ENST00000369454 EIF2AK4Q9P2K8 1649 aaKnown RBP15.26■□□□□ 0.03
RAB39B-201ENST00000369454 ATP7AQ04656 1500 aa15.25■□□□□ 0.03
RAB39B-201ENST00000369454 NPM2Q86SE8 214 aaKnown RBP15.25■□□□□ 0.03
RAB39B-201ENST00000369454 AMER1Q5JTC6 1135 aaPredicted RBP15.25■□□□□ 0.03
RAB39B-201ENST00000369454 TMEM132EQ6IEE7 984 aa15.25■□□□□ 0.03
RAB39B-201ENST00000369454 RTEL1-TNFRSF6BF6WH68 1400 aa15.25■□□□□ 0.03
RAB39B-201ENST00000369454 CDCA8Q53HL2 280 aa15.25■□□□□ 0.03
RAB39B-201ENST00000369454 WASHC2CQ9Y4E1 1318 aa15.24■□□□□ 0.03
RAB39B-201ENST00000369454 CFAP65Q6ZU64 1925 aaKnown RBP15.24■□□□□ 0.03
RAB39B-201ENST00000369454 CLTCL1P53675 1640 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms