RNA–Protein interactions for RNA: ENST00000368935.1

PRUNE1-203, Transcript of prune exopolyphosphatase 1, humanhuman

TSL 1 (best) BASIC

Gene PRUNE1, Length 2,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRUNE1-203ENST00000368935 MSH5O43196 834 aa13.5□□□□□ -0.25
PRUNE1-203ENST00000368935 NUDCQ9Y266 331 aa13.5□□□□□ -0.25
PRUNE1-203ENST00000368935 SYCP2Q9BX26 1530 aa13.5□□□□□ -0.25
PRUNE1-203ENST00000368935 TTC37Q6PGP7 1564 aa13.49□□□□□ -0.25
PRUNE1-203ENST00000368935 MAST1Q9Y2H9 1570 aa13.49□□□□□ -0.25
PRUNE1-203ENST00000368935 KDM2AQ9Y2K7 1162 aa13.49□□□□□ -0.25
PRUNE1-203ENST00000368935 DCAF11Q8TEB1 546 aa13.48□□□□□ -0.25
PRUNE1-203ENST00000368935 CHD1O14646 1710 aa13.48□□□□□ -0.25
PRUNE1-203ENST00000368935 ST20-MTHFSA0A0A6YYL1 179 aa13.48□□□□□ -0.25
PRUNE1-203ENST00000368935 PNISRQ8TF01 805 aaKnown RBP13.47□□□□□ -0.25
PRUNE1-203ENST00000368935 KTN1Q86UP2 1357 aaKnown RBP13.47□□□□□ -0.25
PRUNE1-203ENST00000368935 MYO5CQ9NQX4 1742 aa13.47□□□□□ -0.25
PRUNE1-203ENST00000368935 CCDC144AA2RUR9 1427 aa13.46□□□□□ -0.25
PRUNE1-203ENST00000368935 PRAG1Q86YV5 1406 aa13.46□□□□□ -0.25
PRUNE1-203ENST00000368935 ARHGAP5Q13017 1502 aa13.46□□□□□ -0.25
PRUNE1-203ENST00000368935 PLXNC1O60486 1568 aa13.46□□□□□ -0.25
PRUNE1-203ENST00000368935 TMC1Q8TDI8 760 aa13.46□□□□□ -0.25
PRUNE1-203ENST00000368935 RNF123Q5XPI4 1314 aa13.46□□□□□ -0.25
PRUNE1-203ENST00000368935 BRD4O60885 1362 aaPredicted RBP13.45□□□□□ -0.26
PRUNE1-203ENST00000368935 LRPPRCP42704 1394 aaKnown RBP13.45□□□□□ -0.26
PRUNE1-203ENST00000368935 LAMC1P11047 1609 aa13.45□□□□□ -0.26
PRUNE1-203ENST00000368935 IQGAP3Q86VI3 1631 aa13.45□□□□□ -0.26
PRUNE1-203ENST00000368935 SHROOM2Q13796 1616 aa13.44□□□□□ -0.26
PRUNE1-203ENST00000368935 RSPH4AQ5TD94 716 aa13.44□□□□□ -0.26
PRUNE1-203ENST00000368935 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.44□□□□□ -0.26
PRUNE1-203ENST00000368935 MYBBP1AQ9BQG0 1328 aaKnown RBP13.44□□□□□ -0.26
PRUNE1-203ENST00000368935 RALBP1Q15311 655 aa13.43□□□□□ -0.26
PRUNE1-203ENST00000368935 A2MP01023 1474 aa13.42□□□□□ -0.26
PRUNE1-203ENST00000368935 EIF2AK4Q9P2K8 1649 aaKnown RBP13.42□□□□□ -0.26
PRUNE1-203ENST00000368935 PLA2R1Q13018 1463 aa13.42□□□□□ -0.26
PRUNE1-203ENST00000368935 PRDM15P57071 1507 aaPredicted RBP13.41□□□□□ -0.26
PRUNE1-203ENST00000368935 GPRASP1Q5JY77 1395 aa13.41□□□□□ -0.26
PRUNE1-203ENST00000368935 COL17A1Q9UMD9 1497 aaPredicted RBP13.4□□□□□ -0.26
PRUNE1-203ENST00000368935 SENP3-EIF4A1A0A087X0R7 540 aa13.4□□□□□ -0.26
PRUNE1-203ENST00000368935 SENP3Q9H4L4 574 aaPredicted RBP13.4□□□□□ -0.26
PRUNE1-203ENST00000368935 ABCC2Q92887 1545 aa13.4□□□□□ -0.26
PRUNE1-203ENST00000368935 PLEKHH2Q8IVE3 1493 aa13.4□□□□□ -0.26
PRUNE1-203ENST00000368935 ERICH6Q7L0X2 663 aa13.4□□□□□ -0.26
PRUNE1-203ENST00000368935 PARD3Q8TEW0 1356 aa13.4□□□□□ -0.27
PRUNE1-203ENST00000368935 MAGI2Q86UL8 1455 aa13.39□□□□□ -0.27
PRUNE1-203ENST00000368935 DUOX2Q9NRD8 1548 aa13.39□□□□□ -0.27
PRUNE1-203ENST00000368935 RNF17Q9BXT8 1623 aaKnown RBP13.38□□□□□ -0.27
PRUNE1-203ENST00000368935 CCDC136Q96JN2 1154 aa13.37□□□□□ -0.27
PRUNE1-203ENST00000368935 RGL3Q3MIN7 710 aa13.37□□□□□ -0.27
PRUNE1-203ENST00000368935 NLRP13Q86W25 1043 aa13.37□□□□□ -0.27
PRUNE1-203ENST00000368935 NBPF1Q3BBV0 1214 aa13.36□□□□□ -0.27
PRUNE1-203ENST00000368935 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.36□□□□□ -0.27
PRUNE1-203ENST00000368935 ERBINQ96RT1 1412 aa13.36□□□□□ -0.27
PRUNE1-203ENST00000368935 ERCC6L2Q5T890 1561 aa13.36□□□□□ -0.27
PRUNE1-203ENST00000368935 ATP10AO60312 1499 aa13.36□□□□□ -0.27
PRUNE1-203ENST00000368935 DISP3Q9P2K9 1392 aa13.35□□□□□ -0.27
PRUNE1-203ENST00000368935 ZCCHC11Q5TAX3 1644 aaKnown RBP13.33□□□□□ -0.28
PRUNE1-203ENST00000368935 ABCC1P33527 1531 aa13.33□□□□□ -0.28
PRUNE1-203ENST00000368935 PER1O15534 1290 aaPredicted RBP13.32□□□□□ -0.28
PRUNE1-203ENST00000368935 TESK2Q96S53 571 aa13.32□□□□□ -0.28
PRUNE1-203ENST00000368935 ZMYM4Q5VZL5 1548 aa13.31□□□□□ -0.28
PRUNE1-203ENST00000368935 RRP1P56182 461 aaKnown RBP13.31□□□□□ -0.28
PRUNE1-203ENST00000368935 WASHC2CQ9Y4E1 1318 aa13.31□□□□□ -0.28
PRUNE1-203ENST00000368935 MADDQ8WXG6 1647 aa13.3□□□□□ -0.28
PRUNE1-203ENST00000368935 PLCH2O75038 1416 aa13.3□□□□□ -0.28
PRUNE1-203ENST00000368935 BLMP54132 1417 aaPredicted RBP13.3□□□□□ -0.28
PRUNE1-203ENST00000368935 IQGAP1P46940 1657 aa13.3□□□□□ -0.28
PRUNE1-203ENST00000368935 SPHKAPQ2M3C7 1700 aa13.29□□□□□ -0.28
PRUNE1-203ENST00000368935 PDE3BQ13370 1112 aa13.29□□□□□ -0.28
PRUNE1-203ENST00000368935 RCAN3Q9UKA8 241 aa13.29□□□□□ -0.28
PRUNE1-203ENST00000368935 CEP152O94986 1710 aa13.29□□□□□ -0.28
PRUNE1-203ENST00000368935 INSRP06213 1382 aa13.28□□□□□ -0.28
PRUNE1-203ENST00000368935 TMF1P82094 1093 aa13.28□□□□□ -0.28
PRUNE1-203ENST00000368935 CC2D1BQ5T0F9 858 aaKnown RBP13.28□□□□□ -0.28
PRUNE1-203ENST00000368935 SALL2Q9Y467 1007 aaPredicted RBP13.27□□□□□ -0.28
PRUNE1-203ENST00000368935 TRPM2O94759 1503 aa13.27□□□□□ -0.29
PRUNE1-203ENST00000368935 PANK3Q9H999 370 aa13.27□□□□□ -0.29
PRUNE1-203ENST00000368935 NOP58Q9Y2X3 529 aaKnown RBP13.26□□□□□ -0.29
PRUNE1-203ENST00000368935 TRAPPC8Q9Y2L5 1435 aa13.26□□□□□ -0.29
PRUNE1-203ENST00000368935 ZFYVE16Q7Z3T8 1539 aa13.26□□□□□ -0.29
PRUNE1-203ENST00000368935 UHRF1BP1LA0JNW5 1464 aa13.26□□□□□ -0.29
PRUNE1-203ENST00000368935 DEPDC5O75140 1603 aa13.25□□□□□ -0.29
PRUNE1-203ENST00000368935 EFCAB2Q5VUJ9 269 aa13.25□□□□□ -0.29
PRUNE1-203ENST00000368935 EXOC6Q8TAG9 804 aa13.25□□□□□ -0.29
PRUNE1-203ENST00000368935 SYNMO15061 1565 aa13.24□□□□□ -0.29
PRUNE1-203ENST00000368935 CLASP1Q7Z460 1538 aa13.24□□□□□ -0.29
PRUNE1-203ENST00000368935 CLTCL1P53675 1640 aa13.24□□□□□ -0.29
PRUNE1-203ENST00000368935 WDR7Q9Y4E6 1490 aa13.24□□□□□ -0.29
PRUNE1-203ENST00000368935 ANP32AP39687 249 aaKnown RBP13.23□□□□□ -0.29
PRUNE1-203ENST00000368935 TET3O43151 1660 aa13.23□□□□□ -0.29
PRUNE1-203ENST00000368935 ARAP3Q8WWN8 1544 aa13.23□□□□□ -0.29
PRUNE1-203ENST00000368935 CDCA7LQ96GN5 454 aa13.23□□□□□ -0.29
PRUNE1-203ENST00000368935 BCL11AQ9H165 835 aa13.21□□□□□ -0.29
PRUNE1-203ENST00000368935 RTEL1-TNFRSF6BF6WH68 1400 aa13.21□□□□□ -0.29
PRUNE1-203ENST00000368935 MYOM1P52179 1685 aa13.21□□□□□ -0.29
PRUNE1-203ENST00000368935 MYT1LQ9UL68 1186 aa13.21□□□□□ -0.29
PRUNE1-203ENST00000368935 SCAF11Q99590 1463 aaKnown RBP13.2□□□□□ -0.3
PRUNE1-203ENST00000368935 INO80Q9ULG1 1556 aaPredicted RBP13.2□□□□□ -0.3
PRUNE1-203ENST00000368935 PTPRTO14522 1441 aa13.2□□□□□ -0.3
PRUNE1-203ENST00000368935 PAK3O75914 559 aaPredicted RBP13.2□□□□□ -0.3
PRUNE1-203ENST00000368935 SPAG9O60271 1321 aaKnown RBP13.2□□□□□ -0.3
PRUNE1-203ENST00000368935 SCAPERQ9BY12 1400 aa13.19□□□□□ -0.3
PRUNE1-203ENST00000368935 IPO9Q96P70 1041 aaKnown RBP13.19□□□□□ -0.3
PRUNE1-203ENST00000368935 KIAA1210Q9ULL0 1709 aa13.19□□□□□ -0.3
PRUNE1-203ENST00000368935 ATP7AQ04656 1500 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms