RNA–Protein interactions for RNA: ENST00000368686.1

CHTOP-201, Transcript of chromatin target of PRMT1, humanhuman

TSL 2 BASIC

Gene CHTOP, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-201ENST00000368686 C20orf194Q5TEA3 1177 aa23.19■■□□□ 1.3
CHTOP-201ENST00000368686 DAPK1P53355 1430 aa23.19■■□□□ 1.3
CHTOP-201ENST00000368686 RAD54L2Q9Y4B4 1467 aa23.18■■□□□ 1.3
CHTOP-201ENST00000368686 GOLGA6L3A6NEY3 463 aa23.17■■□□□ 1.3
CHTOP-201ENST00000368686 ZNF326Q5BKZ1 582 aaKnown RBP23.17■■□□□ 1.3
CHTOP-201ENST00000368686 POLA1P09884 1462 aaPredicted RBP23.17■■□□□ 1.3
CHTOP-201ENST00000368686 DNMT1P26358 1616 aaKnown RBP23.16■■□□□ 1.3
CHTOP-201ENST00000368686 PZPP20742 1482 aa23.16■■□□□ 1.3
CHTOP-201ENST00000368686 FANCD2Q9BXW9 1451 aa23.16■■□□□ 1.3
CHTOP-201ENST00000368686 XRCC6P12956 609 aaKnown RBP eCLIP23.16■■□□□ 1.3
CHTOP-201ENST00000368686 FSD2A1L4K1 749 aa23.15■■□□□ 1.3
CHTOP-201ENST00000368686 RGS3P49796 1198 aa23.13■■□□□ 1.29
CHTOP-201ENST00000368686 KIAA1107Q9UPP5 1409 aa23.13■■□□□ 1.29
CHTOP-201ENST00000368686 USP19O94966 1318 aa23.12■■□□□ 1.29
CHTOP-201ENST00000368686 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.12■■□□□ 1.29
CHTOP-201ENST00000368686 CARD11Q9BXL7 1154 aa23.12■■□□□ 1.29
CHTOP-201ENST00000368686 DNAJC5BQ9UF47 199 aa23.12■■□□□ 1.29
CHTOP-201ENST00000368686 TOPBP1Q92547 1522 aa23.11■■□□□ 1.29
CHTOP-201ENST00000368686 ABCC5O15440 1437 aa23.09■■□□□ 1.29
CHTOP-201ENST00000368686 NESP48681 1621 aa23.09■■□□□ 1.29
CHTOP-201ENST00000368686 ANTXR1Q9H6X2 564 aa23.09■■□□□ 1.29
CHTOP-201ENST00000368686 GAPVD1Q14C86 1478 aa23.09■■□□□ 1.29
CHTOP-201ENST00000368686 ARHGEF12Q9NZN5 1544 aa23.09■■□□□ 1.29
CHTOP-201ENST00000368686 SLKQ9H2G2 1235 aaPredicted RBP23.08■■□□□ 1.29
CHTOP-201ENST00000368686 PODXL2Q9NZ53 605 aa23.07■■□□□ 1.28
CHTOP-201ENST00000368686 ST20-MTHFSA0A0A6YYL1 179 aa23.06■■□□□ 1.28
CHTOP-201ENST00000368686 EPRSP07814 1512 aaKnown RBP23.05■■□□□ 1.28
CHTOP-201ENST00000368686 CENPJQ9HC77 1338 aaPredicted RBP23.05■■□□□ 1.28
CHTOP-201ENST00000368686 EIF3AQ14152 1382 aaKnown RBP23.04■■□□□ 1.28
CHTOP-201ENST00000368686 MRE11P49959 708 aa23.03■■□□□ 1.28
CHTOP-201ENST00000368686 PANK2Q9BZ23 570 aa23.03■■□□□ 1.28
CHTOP-201ENST00000368686 TPM2P07951 284 aa23.03■■□□□ 1.28
CHTOP-201ENST00000368686 ZNF608Q9ULD9 1512 aaPredicted RBP23.03■■□□□ 1.28
CHTOP-201ENST00000368686 NLRP1Q9C000 1473 aa23.01■■□□□ 1.27
CHTOP-201ENST00000368686 MAPK8IP3Q9UPT6 1336 aa23■■□□□ 1.27
CHTOP-201ENST00000368686 ARXQ96QS3 562 aa23■■□□□ 1.27
CHTOP-201ENST00000368686 PDCL3Q9H2J4 239 aa23■■□□□ 1.27
CHTOP-201ENST00000368686 ESPNB1AK53 854 aa22.99■■□□□ 1.27
CHTOP-201ENST00000368686 DUSP27Q5VZP5 1158 aa22.99■■□□□ 1.27
CHTOP-201ENST00000368686 PER1O15534 1290 aaPredicted RBP22.98■■□□□ 1.27
CHTOP-201ENST00000368686 ISY1Q9ULR0 285 aaKnown RBP22.98■■□□□ 1.27
CHTOP-201ENST00000368686 MCM4P33991 863 aa22.98■■□□□ 1.27
CHTOP-201ENST00000368686 ADGBQ8N7X0 1667 aa22.96■■□□□ 1.27
CHTOP-201ENST00000368686 MYH16Q9H6N6 1097 aa22.96■■□□□ 1.27
CHTOP-201ENST00000368686 CDK13Q14004 1512 aaKnown RBP22.95■■□□□ 1.26
CHTOP-201ENST00000368686 SEC24BO95487 1268 aa22.94■■□□□ 1.26
CHTOP-201ENST00000368686 PKD2Q13563 968 aa22.94■■□□□ 1.26
CHTOP-201ENST00000368686 UPF2Q9HAU5 1272 aaKnown RBP22.94■■□□□ 1.26
CHTOP-201ENST00000368686 CALD1Q05682 793 aaKnown RBP22.93■■□□□ 1.26
CHTOP-201ENST00000368686 GZF1Q9H116 711 aaPredicted RBP22.92■■□□□ 1.26
CHTOP-201ENST00000368686 GOLGA2Q08379 1002 aa22.91■■□□□ 1.26
CHTOP-201ENST00000368686 GRPEL1Q9HAV7 217 aa22.91■■□□□ 1.26
CHTOP-201ENST00000368686 CLASP1Q7Z460 1538 aa22.91■■□□□ 1.26
CHTOP-201ENST00000368686 KIAA0586Q9BVV6 1533 aa22.91■■□□□ 1.26
CHTOP-201ENST00000368686 TBC1D2Q9BYX2 928 aa22.91■■□□□ 1.26
CHTOP-201ENST00000368686 ZNF521Q96K83 1311 aa22.9■■□□□ 1.26
CHTOP-201ENST00000368686 PLEKHH1Q9ULM0 1364 aa22.9■■□□□ 1.26
CHTOP-201ENST00000368686 TRAK2O60296 914 aa22.9■■□□□ 1.26
CHTOP-201ENST00000368686 ZMYM3Q14202 1370 aa22.89■■□□□ 1.26
CHTOP-201ENST00000368686 TBC1D32Q96NH3 1257 aa22.89■■□□□ 1.25
CHTOP-201ENST00000368686 WDR62O43379 1518 aa22.88■■□□□ 1.25
CHTOP-201ENST00000368686 CC2D1BQ5T0F9 858 aaKnown RBP22.88■■□□□ 1.25
CHTOP-201ENST00000368686 TRIM44Q96DX7 344 aaPredicted RBP22.88■■□□□ 1.25
CHTOP-201ENST00000368686 ERBB4Q15303 1308 aa22.88■■□□□ 1.25
CHTOP-201ENST00000368686 LAMC3Q9Y6N6 1575 aa22.88■■□□□ 1.25
CHTOP-201ENST00000368686 ADAMTS8Q9UP79 889 aa22.87■■□□□ 1.25
CHTOP-201ENST00000368686 ADGRL2O95490 1459 aa22.86■■□□□ 1.25
CHTOP-201ENST00000368686 IGHDP01880 384 aa22.86■■□□□ 1.25
CHTOP-201ENST00000368686 CEP170Q5SW79 1584 aa22.86■■□□□ 1.25
CHTOP-201ENST00000368686 COL17A1Q9UMD9 1497 aaPredicted RBP22.86■■□□□ 1.25
CHTOP-201ENST00000368686 CHMP5Q9NZZ3 219 aa22.85■■□□□ 1.25
CHTOP-201ENST00000368686 CCDC144AA2RUR9 1427 aa22.85■■□□□ 1.25
CHTOP-201ENST00000368686 CGNL1Q0VF96 1302 aa22.84■■□□□ 1.25
CHTOP-201ENST00000368686 ZNF644Q9H582 1327 aaPredicted RBP22.84■■□□□ 1.25
CHTOP-201ENST00000368686 DDX11L8A8MPP1 907 aa22.84■■□□□ 1.25
CHTOP-201ENST00000368686 SLFN5Q08AF3 891 aa22.84■■□□□ 1.25
CHTOP-201ENST00000368686 TRPM1Q7Z4N2 1603 aa22.82■■□□□ 1.24
CHTOP-201ENST00000368686 NKTRP30414 1462 aaKnown RBP22.82■■□□□ 1.24
CHTOP-201ENST00000368686 NINLQ9Y2I6 1382 aa22.81■■□□□ 1.24
CHTOP-201ENST00000368686 PLEKHG5O94827 1062 aa22.81■■□□□ 1.24
CHTOP-201ENST00000368686 KDM2AQ9Y2K7 1162 aa22.81■■□□□ 1.24
CHTOP-201ENST00000368686 CROCC2H7BZ55 1655 aa22.81■■□□□ 1.24
CHTOP-201ENST00000368686 WDR43Q15061 677 aaKnown RBP eCLIP22.8■■□□□ 1.247e-6■■■■■ 27.3
CHTOP-201ENST00000368686 TRMT2AQ8IZ69 625 aaKnown RBP22.8■■□□□ 1.24
CHTOP-201ENST00000368686 TDRD9Q8NDG6 1382 aaKnown RBP22.8■■□□□ 1.24
CHTOP-201ENST00000368686 PRDM4Q9UKN5 801 aa22.79■■□□□ 1.24
CHTOP-201ENST00000368686 PDE3AQ14432 1141 aa22.78■■□□□ 1.24
CHTOP-201ENST00000368686 KIAA1211Q6ZU35 1233 aa22.78■■□□□ 1.24
CHTOP-201ENST00000368686 CAMSAP2Q08AD1 1489 aa22.77■■□□□ 1.24
CHTOP-201ENST00000368686 URB2Q14146 1524 aaKnown RBP22.77■■□□□ 1.24
CHTOP-201ENST00000368686 IQGAP2Q13576 1575 aa22.77■■□□□ 1.24
CHTOP-201ENST00000368686 CLUAP1Q96AJ1 413 aa22.77■■□□□ 1.24
CHTOP-201ENST00000368686 PANK3Q9H999 370 aa22.77■■□□□ 1.23
CHTOP-201ENST00000368686 LAMC1P11047 1609 aa22.76■■□□□ 1.23
CHTOP-201ENST00000368686 TERF1P54274 439 aa22.76■■□□□ 1.23
CHTOP-201ENST00000368686 MAP7D2Q96T17 732 aa22.76■■□□□ 1.23
CHTOP-201ENST00000368686 ANKRD30AQ9BXX3 1397 aa22.76■■□□□ 1.23
CHTOP-201ENST00000368686 KDM5DQ9BY66 1539 aa22.75■■□□□ 1.23
CHTOP-201ENST00000368686 ANKRD50Q9ULJ7 1429 aa22.74■■□□□ 1.23
CHTOP-201ENST00000368686 ITSN2Q9NZM3 1697 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms