RNA–Protein interactions for RNA: ENST00000366872.9

CAPN8-201, Transcript of calpain 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN8, Length 2,427 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN8-201ENST00000366872 FAM135AQ9P2D6 1515 aa17.21■□□□□ 0.35
CAPN8-201ENST00000366872 ARID3CA6NKF2 412 aa17.21■□□□□ 0.35
CAPN8-201ENST00000366872 NOP58Q9Y2X3 529 aaKnown RBP17.21■□□□□ 0.35
CAPN8-201ENST00000366872 PDE3BQ13370 1112 aa17.2■□□□□ 0.34
CAPN8-201ENST00000366872 PARD3Q8TEW0 1356 aa17.2■□□□□ 0.34
CAPN8-201ENST00000366872 CCDC141Q6ZP82 1450 aa17.2■□□□□ 0.34
CAPN8-201ENST00000366872 RSPH4AQ5TD94 716 aa17.19■□□□□ 0.34
CAPN8-201ENST00000366872 PRDM15P57071 1507 aaPredicted RBP17.19■□□□□ 0.34
CAPN8-201ENST00000366872 PLXNC1O60486 1568 aa17.19■□□□□ 0.34
CAPN8-201ENST00000366872 TMC1Q8TDI8 760 aa17.19■□□□□ 0.34
CAPN8-201ENST00000366872 CCDC136Q96JN2 1154 aa17.19■□□□□ 0.34
CAPN8-201ENST00000366872 SAMD9LQ8IVG5 1584 aa17.19■□□□□ 0.34
CAPN8-201ENST00000366872 IQGAP3Q86VI3 1631 aa17.19■□□□□ 0.34
CAPN8-201ENST00000366872 CARD11Q9BXL7 1154 aa17.18■□□□□ 0.34
CAPN8-201ENST00000366872 MYO5CQ9NQX4 1742 aa17.18■□□□□ 0.34
CAPN8-201ENST00000366872 PRAG1Q86YV5 1406 aa17.18■□□□□ 0.34
CAPN8-201ENST00000366872 PLEKHH2Q8IVE3 1493 aa17.17■□□□□ 0.34
CAPN8-201ENST00000366872 PLEKHD1A6NEE1 506 aa17.17■□□□□ 0.34
CAPN8-201ENST00000366872 ATP10AO60312 1499 aa17.16■□□□□ 0.34
CAPN8-201ENST00000366872 COL17A1Q9UMD9 1497 aaPredicted RBP17.16■□□□□ 0.34
CAPN8-201ENST00000366872 RNF17Q9BXT8 1623 aaKnown RBP17.15■□□□□ 0.34
CAPN8-201ENST00000366872 SLC24A1O60721 1099 aa17.15■□□□□ 0.34
CAPN8-201ENST00000366872 TSPY4P0CV99 314 aa17.13■□□□□ 0.33
CAPN8-201ENST00000366872 TSPY10P0CW01 314 aa17.13■□□□□ 0.33
CAPN8-201ENST00000366872 NLRP13Q86W25 1043 aa17.13■□□□□ 0.33
CAPN8-201ENST00000366872 JPH4Q96JJ6 628 aa17.13■□□□□ 0.33
CAPN8-201ENST00000366872 IPO9Q96P70 1041 aaKnown RBP17.13■□□□□ 0.33
CAPN8-201ENST00000366872 MAGI2Q86UL8 1455 aa17.13■□□□□ 0.33
CAPN8-201ENST00000366872 BLMP54132 1417 aaPredicted RBP17.13■□□□□ 0.33
CAPN8-201ENST00000366872 ANP32AP39687 249 aaKnown RBP17.12■□□□□ 0.33
CAPN8-201ENST00000366872 CHMP7Q8WUX9 453 aaPredicted RBP17.12■□□□□ 0.33
CAPN8-201ENST00000366872 ST20-MTHFSA0A0A6YYL1 179 aa17.11■□□□□ 0.33
CAPN8-201ENST00000366872 RRP1P56182 461 aaKnown RBP17.11■□□□□ 0.33
CAPN8-201ENST00000366872 TCERG1O14776 1098 aaKnown RBP17.1■□□□□ 0.33
CAPN8-201ENST00000366872 ZNF777Q9ULD5 760 aaPredicted RBP17.1■□□□□ 0.33
CAPN8-201ENST00000366872 MS4A1P11836 297 aa17.09■□□□□ 0.33
CAPN8-201ENST00000366872 CCDC144AA2RUR9 1427 aa17.09■□□□□ 0.33
CAPN8-201ENST00000366872 ZNF326Q5BKZ1 582 aaKnown RBP17.08■□□□□ 0.33
CAPN8-201ENST00000366872 A2MP01023 1474 aa17.07■□□□□ 0.32
CAPN8-201ENST00000366872 PER1O15534 1290 aaPredicted RBP17.07■□□□□ 0.32
CAPN8-201ENST00000366872 PLA2R1Q13018 1463 aa17.06■□□□□ 0.32
CAPN8-201ENST00000366872 RCAN3Q9UKA8 241 aa17.06■□□□□ 0.32
CAPN8-201ENST00000366872 DCAF11Q8TEB1 546 aa17.05■□□□□ 0.32
CAPN8-201ENST00000366872 IQGAP1P46940 1657 aa17.05■□□□□ 0.32
CAPN8-201ENST00000366872 DUOX2Q9NRD8 1548 aa17.04■□□□□ 0.32
CAPN8-201ENST00000366872 SHROOM2Q13796 1616 aa17.04■□□□□ 0.32
CAPN8-201ENST00000366872 DEKP35659 375 aaKnown RBP17.04■□□□□ 0.32
CAPN8-201ENST00000366872 CLASP1Q7Z460 1538 aa17.03■□□□□ 0.32
CAPN8-201ENST00000366872 PAK3O75914 559 aaPredicted RBP17.02■□□□□ 0.32
CAPN8-201ENST00000366872 POLR3GLQ9BT43 218 aa17.02■□□□□ 0.32
CAPN8-201ENST00000366872 SYCP2Q9BX26 1530 aa17.02■□□□□ 0.32
CAPN8-201ENST00000366872 ERCC6Q03468 1493 aa17.02■□□□□ 0.32
CAPN8-201ENST00000366872 ERBINQ96RT1 1412 aa17.02■□□□□ 0.32
CAPN8-201ENST00000366872 ZBTB47Q9UFB7 747 aaPredicted RBP17.01■□□□□ 0.31
CAPN8-201ENST00000366872 TTC37Q6PGP7 1564 aa17■□□□□ 0.31
CAPN8-201ENST00000366872 NEURL4Q96JN8 1562 aa17■□□□□ 0.31
CAPN8-201ENST00000366872 SPHKAPQ2M3C7 1700 aa16.99■□□□□ 0.31
CAPN8-201ENST00000366872 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP16.99■□□□□ 0.31
CAPN8-201ENST00000366872 TESK2Q96S53 571 aa16.99■□□□□ 0.31
CAPN8-201ENST00000366872 SYNMO15061 1565 aa16.99■□□□□ 0.31
CAPN8-201ENST00000366872 KIAA1210Q9ULL0 1709 aa16.99■□□□□ 0.31
CAPN8-201ENST00000366872 CEP152O94986 1710 aa16.98■□□□□ 0.31
CAPN8-201ENST00000366872 MADDQ8WXG6 1647 aa16.98■□□□□ 0.31
CAPN8-201ENST00000366872 HNRNPMP52272 730 aaKnown RBP eCLIP16.97■□□□□ 0.31
CAPN8-201ENST00000366872 USP35Q9P2H5 1018 aa16.97■□□□□ 0.31
CAPN8-201ENST00000366872 KDM2AQ9Y2K7 1162 aa16.97■□□□□ 0.31
CAPN8-201ENST00000366872 EXOC6Q8TAG9 804 aa16.96■□□□□ 0.31
CAPN8-201ENST00000366872 STAC3Q96MF2 364 aa16.96■□□□□ 0.31
CAPN8-201ENST00000366872 BACH2Q9BYV9 841 aa16.96■□□□□ 0.3
CAPN8-201ENST00000366872 ARHGAP5Q13017 1502 aa16.95■□□□□ 0.3
CAPN8-201ENST00000366872 DISP3Q9P2K9 1392 aa16.95■□□□□ 0.3
CAPN8-201ENST00000366872 PDE4AP27815 886 aa16.93■□□□□ 0.3
CAPN8-201ENST00000366872 ABCC2Q92887 1545 aa16.93■□□□□ 0.3
CAPN8-201ENST00000366872 NPC1L1Q9UHC9 1359 aa16.93■□□□□ 0.3
CAPN8-201ENST00000366872 DEPDC5O75140 1603 aa16.92■□□□□ 0.3
CAPN8-201ENST00000366872 SCAPERQ9BY12 1400 aa16.92■□□□□ 0.3
CAPN8-201ENST00000366872 WDR7Q9Y4E6 1490 aa16.92■□□□□ 0.3
CAPN8-201ENST00000366872 TMF1P82094 1093 aa16.92■□□□□ 0.3
CAPN8-201ENST00000366872 TRPM2O94759 1503 aa16.92■□□□□ 0.3
CAPN8-201ENST00000366872 RTL5Q5HYW3 569 aaPredicted RBP16.91■□□□□ 0.3
CAPN8-201ENST00000366872 ARAP3Q8WWN8 1544 aa16.91■□□□□ 0.3
CAPN8-201ENST00000366872 MYOM1P52179 1685 aa16.9■□□□□ 0.3
CAPN8-201ENST00000366872 CHD1O14646 1710 aa16.9■□□□□ 0.3
CAPN8-201ENST00000366872 PIK3C2GO75747 1445 aa16.89■□□□□ 0.29
CAPN8-201ENST00000366872 NBPF1Q3BBV0 1214 aa16.89■□□□□ 0.29
CAPN8-201ENST00000366872 ABCC1P33527 1531 aa16.89■□□□□ 0.29
CAPN8-201ENST00000366872 VIRMAQ69YN4 1812 aaKnown RBP16.88■□□□□ 0.29
CAPN8-201ENST00000366872 DDRGK1Q96HY6 314 aa16.87■□□□□ 0.29
CAPN8-201ENST00000366872 PPM1GO15355 546 aaPredicted RBP16.87■□□□□ 0.29
CAPN8-201ENST00000366872 TET3O43151 1660 aa16.87■□□□□ 0.29
CAPN8-201ENST00000366872 ASXL1Q8IXJ9 1541 aa16.86■□□□□ 0.29
CAPN8-201ENST00000366872 PTPRTO14522 1441 aa16.86■□□□□ 0.29
CAPN8-201ENST00000366872 ZNF521Q96K83 1311 aa16.86■□□□□ 0.29
CAPN8-201ENST00000366872 KDM5AP29375 1690 aaKnown RBP16.86■□□□□ 0.29
CAPN8-201ENST00000366872 PANK3Q9H999 370 aa16.86■□□□□ 0.29
CAPN8-201ENST00000366872 RTEL1-TNFRSF6BF6WH68 1400 aa16.86■□□□□ 0.29
CAPN8-201ENST00000366872 KDM2BQ8NHM5 1336 aa16.85■□□□□ 0.29
CAPN8-201ENST00000366872 FBLN2P98095 1184 aa16.85■□□□□ 0.29
CAPN8-201ENST00000366872 CNGB1Q14028 1251 aaPredicted RBP16.85■□□□□ 0.29
CAPN8-201ENST00000366872 NBR1Q14596 966 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms