RNA–Protein interactions for RNA: ENST00000366690.4

RAB4A-201, Transcript of RAB4A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB4A, Length 2,966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4A-201ENST00000366690 SHANK2Q9UPX8 1470 aa24.94■■□□□ 1.58
RAB4A-201ENST00000366690 MYBBP1AQ9BQG0 1328 aaKnown RBP24.92■■□□□ 1.58
RAB4A-201ENST00000366690 CCDC144AA2RUR9 1427 aa24.92■■□□□ 1.58
RAB4A-201ENST00000366690 FAM135AQ9P2D6 1515 aa24.92■■□□□ 1.58
RAB4A-201ENST00000366690 ARID4BQ4LE39 1312 aaPredicted RBP24.92■■□□□ 1.58
RAB4A-201ENST00000366690 SAMD9LQ8IVG5 1584 aa24.92■■□□□ 1.58
RAB4A-201ENST00000366690 CCDC141Q6ZP82 1450 aa24.89■■□□□ 1.58
RAB4A-201ENST00000366690 SYCP2Q9BX26 1530 aa24.89■■□□□ 1.58
RAB4A-201ENST00000366690 ARHGEF12Q9NZN5 1544 aa24.88■■□□□ 1.57
RAB4A-201ENST00000366690 CDC42BPBQ9Y5S2 1711 aa24.88■■□□□ 1.57
RAB4A-201ENST00000366690 ARHGAP5Q13017 1502 aa24.86■■□□□ 1.57
RAB4A-201ENST00000366690 CDCA7LQ96GN5 454 aa24.86■■□□□ 1.57
RAB4A-201ENST00000366690 RALBP1Q15311 655 aa24.84■■□□□ 1.57
RAB4A-201ENST00000366690 KDM5DQ9BY66 1539 aa24.84■■□□□ 1.57
RAB4A-201ENST00000366690 PRAG1Q86YV5 1406 aa24.84■■□□□ 1.57
RAB4A-201ENST00000366690 EXOC6Q8TAG9 804 aa24.84■■□□□ 1.57
RAB4A-201ENST00000366690 DISP3Q9P2K9 1392 aa24.83■■□□□ 1.57
RAB4A-201ENST00000366690 PAK3O75914 559 aaPredicted RBP24.82■■□□□ 1.56
RAB4A-201ENST00000366690 RNF123Q5XPI4 1314 aa24.82■■□□□ 1.56
RAB4A-201ENST00000366690 PLEKHH2Q8IVE3 1493 aa24.82■■□□□ 1.56
RAB4A-201ENST00000366690 BRD4O60885 1362 aaPredicted RBP24.82■■□□□ 1.56
RAB4A-201ENST00000366690 KTN1Q86UP2 1357 aaKnown RBP24.81■■□□□ 1.56
RAB4A-201ENST00000366690 PLA2R1Q13018 1463 aa24.81■■□□□ 1.56
RAB4A-201ENST00000366690 LRPPRCP42704 1394 aaKnown RBP24.81■■□□□ 1.56
RAB4A-201ENST00000366690 TTC37Q6PGP7 1564 aa24.81■■□□□ 1.56
RAB4A-201ENST00000366690 NBR1Q14596 966 aa24.81■■□□□ 1.56
RAB4A-201ENST00000366690 PANK3Q9H999 370 aa24.81■■□□□ 1.56
RAB4A-201ENST00000366690 ARHGEF5Q12774 1597 aa24.8■■□□□ 1.56
RAB4A-201ENST00000366690 PLIN1O60240 522 aa24.79■■□□□ 1.56
RAB4A-201ENST00000366690 NLRP13Q86W25 1043 aa24.79■■□□□ 1.56
RAB4A-201ENST00000366690 A2MP01023 1474 aa24.78■■□□□ 1.56
RAB4A-201ENST00000366690 BCL11AQ9H165 835 aa24.78■■□□□ 1.56
RAB4A-201ENST00000366690 RCAN3Q9UKA8 241 aa24.78■■□□□ 1.56
RAB4A-201ENST00000366690 PREX2Q70Z35 1606 aa24.77■■□□□ 1.56
RAB4A-201ENST00000366690 RRP1P56182 461 aaKnown RBP24.77■■□□□ 1.56
RAB4A-201ENST00000366690 PER1O15534 1290 aaPredicted RBP24.77■■□□□ 1.56
RAB4A-201ENST00000366690 ERCC6L2Q5T890 1561 aa24.76■■□□□ 1.55
RAB4A-201ENST00000366690 TESK2Q96S53 571 aa24.75■■□□□ 1.55
RAB4A-201ENST00000366690 NPM2Q86SE8 214 aaKnown RBP24.75■■□□□ 1.55
RAB4A-201ENST00000366690 SKAP1Q86WV1 359 aa24.75■■□□□ 1.55
RAB4A-201ENST00000366690 TRPM1Q7Z4N2 1603 aa24.75■■□□□ 1.55
RAB4A-201ENST00000366690 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.73■■□□□ 1.557e-7■■□□□ 14.3
RAB4A-201ENST00000366690 PARD3Q8TEW0 1356 aa24.72■■□□□ 1.55
RAB4A-201ENST00000366690 NOP58Q9Y2X3 529 aaKnown RBP24.72■■□□□ 1.55
RAB4A-201ENST00000366690 E9PCH4 1651 aa24.72■■□□□ 1.55
RAB4A-201ENST00000366690 RSPH4AQ5TD94 716 aa24.71■■□□□ 1.55
RAB4A-201ENST00000366690 CHD1O14646 1710 aa24.69■■□□□ 1.54
RAB4A-201ENST00000366690 TMF1P82094 1093 aa24.66■■□□□ 1.54
RAB4A-201ENST00000366690 ERBINQ96RT1 1412 aa24.66■■□□□ 1.54
RAB4A-201ENST00000366690 AFAP1Q8N556 730 aa24.65■■□□□ 1.54
RAB4A-201ENST00000366690 ANP32AP39687 249 aaKnown RBP24.65■■□□□ 1.54
RAB4A-201ENST00000366690 MYT1LQ9UL68 1186 aa24.65■■□□□ 1.54
RAB4A-201ENST00000366690 COL17A1Q9UMD9 1497 aaPredicted RBP24.64■■□□□ 1.54
RAB4A-201ENST00000366690 MYO5CQ9NQX4 1742 aa24.64■■□□□ 1.53
RAB4A-201ENST00000366690 ADAMTS8Q9UP79 889 aa24.61■■□□□ 1.53
RAB4A-201ENST00000366690 GPRASP1Q5JY77 1395 aa24.6■■□□□ 1.53
RAB4A-201ENST00000366690 UNC13BO14795 1591 aa24.6■■□□□ 1.53
RAB4A-201ENST00000366690 TRAPPC8Q9Y2L5 1435 aa24.59■■□□□ 1.53
RAB4A-201ENST00000366690 PRDM15P57071 1507 aaPredicted RBP24.57■■□□□ 1.52
RAB4A-201ENST00000366690 C20orf194Q5TEA3 1177 aa24.57■■□□□ 1.52
RAB4A-201ENST00000366690 CRBNQ96SW2 442 aa24.57■■□□□ 1.52
RAB4A-201ENST00000366690 EFCAB2Q5VUJ9 269 aa24.57■■□□□ 1.52
RAB4A-201ENST00000366690 IPO9Q96P70 1041 aaKnown RBP24.57■■□□□ 1.52
RAB4A-201ENST00000366690 KNSTRNQ9Y448 316 aa24.55■■□□□ 1.52
RAB4A-201ENST00000366690 IQGAP3Q86VI3 1631 aa24.54■■□□□ 1.52
RAB4A-201ENST00000366690 ZBTB47Q9UFB7 747 aaPredicted RBP24.54■■□□□ 1.52
RAB4A-201ENST00000366690 ABCC2Q92887 1545 aa24.52■■□□□ 1.52
RAB4A-201ENST00000366690 DEKP35659 375 aaKnown RBP24.52■■□□□ 1.52
RAB4A-201ENST00000366690 CCDC146Q8IYE0 955 aa24.52■■□□□ 1.52
RAB4A-201ENST00000366690 SPAG9O60271 1321 aaKnown RBP24.52■■□□□ 1.52
RAB4A-201ENST00000366690 DUOX2Q9NRD8 1548 aa24.52■■□□□ 1.52
RAB4A-201ENST00000366690 PDE3BQ13370 1112 aa24.52■■□□□ 1.52
RAB4A-201ENST00000366690 MAGI2Q86UL8 1455 aa24.51■■□□□ 1.51
RAB4A-201ENST00000366690 MAST1Q9Y2H9 1570 aa24.5■■□□□ 1.51
RAB4A-201ENST00000366690 PPP2R1AP30153 589 aa24.5■■□□□ 1.51
RAB4A-201ENST00000366690 WDR43Q15061 677 aaKnown RBP eCLIP24.5■■□□□ 1.51
RAB4A-201ENST00000366690 PDE4AP27815 886 aa24.48■■□□□ 1.51
RAB4A-201ENST00000366690 PLXNC1O60486 1568 aa24.48■■□□□ 1.51
RAB4A-201ENST00000366690 PLCH2O75038 1416 aa24.48■■□□□ 1.51
RAB4A-201ENST00000366690 BLMP54132 1417 aaPredicted RBP24.45■■□□□ 1.51
RAB4A-201ENST00000366690 PLEKHH1Q9ULM0 1364 aa24.45■■□□□ 1.5
RAB4A-201ENST00000366690 KIF3BO15066 747 aa24.45■■□□□ 1.5
RAB4A-201ENST00000366690 LAS1LQ9Y4W2 734 aaKnown RBP24.45■■□□□ 1.5
RAB4A-201ENST00000366690 EIF2AK4Q9P2K8 1649 aaKnown RBP24.44■■□□□ 1.5
RAB4A-201ENST00000366690 WDR7Q9Y4E6 1490 aa24.44■■□□□ 1.5
RAB4A-201ENST00000366690 WASHC2CQ9Y4E1 1318 aa24.43■■□□□ 1.5
RAB4A-201ENST00000366690 AMER1Q5JTC6 1135 aaPredicted RBP24.43■■□□□ 1.5
RAB4A-201ENST00000366690 ZCCHC11Q5TAX3 1644 aaKnown RBP24.42■■□□□ 1.5
RAB4A-201ENST00000366690 TCERG1O14776 1098 aaKnown RBP24.42■■□□□ 1.5
RAB4A-201ENST00000366690 CFAP70Q5T0N1 1121 aa24.42■■□□□ 1.5
RAB4A-201ENST00000366690 SHROOM2Q13796 1616 aa24.41■■□□□ 1.5
RAB4A-201ENST00000366690 SENP3Q9H4L4 574 aaPredicted RBP24.4■■□□□ 1.5
RAB4A-201ENST00000366690 ATP10AO60312 1499 aa24.39■■□□□ 1.5
RAB4A-201ENST00000366690 ABCC1P33527 1531 aa24.39■■□□□ 1.5
RAB4A-201ENST00000366690 CHGAP10645 457 aaKnown RBP24.38■■□□□ 1.49
RAB4A-201ENST00000366690 LAMC1P11047 1609 aa24.38■■□□□ 1.49
RAB4A-201ENST00000366690 BACH2Q9BYV9 841 aa24.38■■□□□ 1.49
RAB4A-201ENST00000366690 MADDQ8WXG6 1647 aa24.37■■□□□ 1.49
RAB4A-201ENST00000366690 UGGT1Q9NYU2 1555 aa24.37■■□□□ 1.49
RAB4A-201ENST00000366690 DUSP27Q5VZP5 1158 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms