RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 WFS1O76024 890 aa2.43□□□□□ -2.02
RNU6-54P-201ENST00000365563 PTCD2Q8WV60 388 aaKnown RBP2.43□□□□□ -2.02
RNU6-54P-201ENST00000365563 ZBED2Q9BTP6 218 aa2.43□□□□□ -2.02
RNU6-54P-201ENST00000365563 BCL2L12Q9HB09 334 aa2.43□□□□□ -2.02
RNU6-54P-201ENST00000365563 CIZ1Q9ULV3 898 aaPredicted RBP2.43□□□□□ -2.02
RNU6-54P-201ENST00000365563 KDM4FA0A1W2PPD8 638 aa2.42□□□□□ -2.02
RNU6-54P-201ENST00000365563 SOWAHBA6NEL2 793 aa2.42□□□□□ -2.02
RNU6-54P-201ENST00000365563 DGAT1O75907 488 aa2.42□□□□□ -2.02
RNU6-54P-201ENST00000365563 ARID1BQ8NFD5 2236 aaPredicted RBP2.42□□□□□ -2.02
RNU6-54P-201ENST00000365563 BCAMP50895 628 aa2.41□□□□□ -2.02
RNU6-54P-201ENST00000365563 LAPTM4BQ86VI4 370 aa2.41□□□□□ -2.02
RNU6-54P-201ENST00000365563 Q8N3U1 123 aa2.41□□□□□ -2.02
RNU6-54P-201ENST00000365563 ZNF454Q8N9F8 522 aa2.41□□□□□ -2.02
RNU6-54P-201ENST00000365563 GGCXP38435 758 aa2.4□□□□□ -2.03
RNU6-54P-201ENST00000365563 MYT1Q01538 1121 aa2.4□□□□□ -2.03
RNU6-54P-201ENST00000365563 SPOCK2Q92563 424 aa2.39□□□□□ -2.03
RNU6-54P-201ENST00000365563 WBP1LQ9NX94 342 aa2.39□□□□□ -2.03
RNU6-54P-201ENST00000365563 RABGEF1Q9UJ41 708 aa2.39□□□□□ -2.03
RNU6-54P-201ENST00000365563 TSR3Q9UJK0 312 aaKnown RBP2.39□□□□□ -2.03
RNU6-54P-201ENST00000365563 VGFO15240 615 aaPredicted RBP2.38□□□□□ -2.03
RNU6-54P-201ENST00000365563 VASPP50552 380 aaPredicted RBP2.38□□□□□ -2.03
RNU6-54P-201ENST00000365563 PPP1R18Q6NYC8 613 aa2.38□□□□□ -2.03
RNU6-54P-201ENST00000365563 LRCH3Q96II8 777 aa2.38□□□□□ -2.03
RNU6-54P-201ENST00000365563 EIF4ENIF1Q9NRA8 985 aaKnown RBP2.38□□□□□ -2.03
RNU6-54P-201ENST00000365563 TAOK2Q9UL54 1235 aa2.38□□□□□ -2.03
RNU6-54P-201ENST00000365563 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP2.37□□□□□ -2.03
RNU6-54P-201ENST00000365563 FAM187AA6NFU0 413 aa2.37□□□□□ -2.03
RNU6-54P-201ENST00000365563 POTECB2RU33 542 aa2.37□□□□□ -2.03
RNU6-54P-201ENST00000365563 PPP1R3GB7ZBB8 358 aa2.37□□□□□ -2.03
RNU6-54P-201ENST00000365563 RIOK3O14730 519 aaKnown RBP2.37□□□□□ -2.03
RNU6-54P-201ENST00000365563 FBXO22Q8NEZ5 403 aa2.37□□□□□ -2.03
RNU6-54P-201ENST00000365563 JPH4Q96JJ6 628 aa2.37□□□□□ -2.03
RNU6-54P-201ENST00000365563 ZFP91Q96JP5 570 aaPredicted RBP2.37□□□□□ -2.03
RNU6-54P-201ENST00000365563 ZFRQ96KR1 1074 aaKnown RBP2.37□□□□□ -2.03
RNU6-54P-201ENST00000365563 IL21Q9HBE4 155 aa2.37□□□□□ -2.03
RNU6-54P-201ENST00000365563 CDKN2AIPQ9NXV6 580 aaPredicted RBP2.37□□□□□ -2.03
RNU6-54P-201ENST00000365563 HPS5Q9UPZ3 1129 aa2.37□□□□□ -2.03
RNU6-54P-201ENST00000365563 FOSBP53539 338 aa2.36□□□□□ -2.03
RNU6-54P-201ENST00000365563 PRR20EP86478 221 aa2.36□□□□□ -2.03
RNU6-54P-201ENST00000365563 PRR20CP86479 221 aa2.36□□□□□ -2.03
RNU6-54P-201ENST00000365563 PRR20DP86480 221 aa2.36□□□□□ -2.03
RNU6-54P-201ENST00000365563 PRR20BP86481 221 aa2.36□□□□□ -2.03
RNU6-54P-201ENST00000365563 PRR20AP86496 221 aa2.36□□□□□ -2.03
RNU6-54P-201ENST00000365563 WDR26Q9H7D7 661 aa2.36□□□□□ -2.03
RNU6-54P-201ENST00000365563 C11orf95C9JLR9 678 aaPredicted RBP2.35□□□□□ -2.03
RNU6-54P-201ENST00000365563 FOXK1P85037 733 aa2.35□□□□□ -2.03
RNU6-54P-201ENST00000365563 NFX1Q12986 1120 aaKnown RBP2.35□□□□□ -2.03
RNU6-54P-201ENST00000365563 PLPP6Q8IY26 295 aa2.35□□□□□ -2.03
RNU6-54P-201ENST00000365563 ZDHHC16Q969W1 377 aa2.35□□□□□ -2.03
RNU6-54P-201ENST00000365563 PPP4CP60510 307 aa2.34□□□□□ -2.03
RNU6-54P-201ENST00000365563 FAM98CQ17RN3 349 aaKnown RBP2.34□□□□□ -2.03
RNU6-54P-201ENST00000365563 TJAP1Q5JTD0 557 aa2.34□□□□□ -2.03
RNU6-54P-201ENST00000365563 TMUB1Q9BVT8 246 aa2.34□□□□□ -2.03
RNU6-54P-201ENST00000365563 ST8SIA5O15466 376 aa2.33□□□□□ -2.04
RNU6-54P-201ENST00000365563 ONECUT3O60422 494 aaPredicted RBP2.33□□□□□ -2.04
RNU6-54P-201ENST00000365563 CRIPAKQ8N1N5 446 aa2.33□□□□□ -2.04
RNU6-54P-201ENST00000365563 ZSCAN1Q8NBB4 408 aa2.33□□□□□ -2.04
RNU6-54P-201ENST00000365563 MTRQ99707 1265 aa2.33□□□□□ -2.04
RNU6-54P-201ENST00000365563 AAASQ9NRG9 546 aa2.33□□□□□ -2.04
RNU6-54P-201ENST00000365563 TERTO14746 1132 aaKnown RBP2.32□□□□□ -2.04
RNU6-54P-201ENST00000365563 SLC19A1P41440 591 aa2.32□□□□□ -2.04
RNU6-54P-201ENST00000365563 PROX2Q3B8N5 592 aa2.32□□□□□ -2.04
RNU6-54P-201ENST00000365563 TRIM67Q6ZTA4 783 aa2.32□□□□□ -2.04
RNU6-54P-201ENST00000365563 ZNF598Q86UK7 904 aaKnown RBP2.32□□□□□ -2.04
RNU6-54P-201ENST00000365563 SLC16A10Q8TF71 515 aa2.32□□□□□ -2.04
RNU6-54P-201ENST00000365563 NECTIN2Q92692 538 aa2.32□□□□□ -2.04
RNU6-54P-201ENST00000365563 MFRPQ9BY79 579 aa2.32□□□□□ -2.04
RNU6-54P-201ENST00000365563 ADAM33Q9BZ11 813 aa2.32□□□□□ -2.04
RNU6-54P-201ENST00000365563 FKBP8Q14318 412 aa2.31□□□□□ -2.04
RNU6-54P-201ENST00000365563 CTC1Q2NKJ3 1217 aa2.31□□□□□ -2.04
RNU6-54P-201ENST00000365563 OXER1Q8TDS5 423 aa2.31□□□□□ -2.04
RNU6-54P-201ENST00000365563 BCL11BQ9C0K0 894 aaPredicted RBP2.31□□□□□ -2.04
RNU6-54P-201ENST00000365563 GPHNQ9NQX3 736 aaPredicted RBP2.31□□□□□ -2.04
RNU6-54P-201ENST00000365563 KIAA1468Q9P260 1216 aa2.31□□□□□ -2.04
RNU6-54P-201ENST00000365563 SEPT9Q9UHD8 586 aaPredicted RBP2.31□□□□□ -2.04
RNU6-54P-201ENST00000365563 STK24Q9Y6E0 443 aa2.31□□□□□ -2.04
RNU6-54P-201ENST00000365563 AXIN1O15169 862 aa2.3□□□□□ -2.04
RNU6-54P-201ENST00000365563 ZNF697Q5TEC3 545 aa2.3□□□□□ -2.04
RNU6-54P-201ENST00000365563 SPRYD7Q5W111 196 aa2.3□□□□□ -2.04
RNU6-54P-201ENST00000365563 LMOD2Q6P5Q4 547 aa2.3□□□□□ -2.04
RNU6-54P-201ENST00000365563 UPF1Q92900 1129 aaKnown RBP eCLIP2.3□□□□□ -2.04
RNU6-54P-201ENST00000365563 FBXW7Q969H0 707 aa2.3□□□□□ -2.04
RNU6-54P-201ENST00000365563 GMPR2Q9P2T1 348 aaKnown RBP2.3□□□□□ -2.04
RNU6-54P-201ENST00000365563 RNF225M0QZC1 329 aaPredicted RBP2.29□□□□□ -2.04
RNU6-54P-201ENST00000365563 DSG2Q14126 1118 aa2.29□□□□□ -2.04
RNU6-54P-201ENST00000365563 SENP2Q9HC62 589 aa2.29□□□□□ -2.04
RNU6-54P-201ENST00000365563 TRIM6-TRIM34B2RNG4 842 aa2.28□□□□□ -2.04
RNU6-54P-201ENST00000365563 TNFRSF10AO00220 468 aa2.28□□□□□ -2.04
RNU6-54P-201ENST00000365563 COL9A1P20849 921 aa2.28□□□□□ -2.04
RNU6-54P-201ENST00000365563 KCNMA1Q12791 1236 aa2.28□□□□□ -2.04
RNU6-54P-201ENST00000365563 TMEM151AQ8N4L1 468 aa2.28□□□□□ -2.04
RNU6-54P-201ENST00000365563 CCER1Q8TC90 406 aaPredicted RBP2.28□□□□□ -2.04
RNU6-54P-201ENST00000365563 IRF7Q92985 503 aa2.28□□□□□ -2.04
RNU6-54P-201ENST00000365563 KIFC2Q96AC6 838 aa2.28□□□□□ -2.04
RNU6-54P-201ENST00000365563 STK25O00506 426 aa2.27□□□□□ -2.05
RNU6-54P-201ENST00000365563 GDF9O60383 454 aa2.27□□□□□ -2.05
RNU6-54P-201ENST00000365563 EVI5O60447 810 aa2.27□□□□□ -2.05
RNU6-54P-201ENST00000365563 AVPP01185 164 aa2.27□□□□□ -2.05
RNU6-54P-201ENST00000365563 IGHA1P01876 353 aa2.27□□□□□ -2.05
RNU6-54P-201ENST00000365563 TYW1BQ6NUM6 668 aa2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms