RNA–Protein interactions for RNA: ENST00000364005.1

RNU6-340P-201, Transcript of RNA, U6 small nuclear 340, pseudogene, humanhuman

BASIC

Gene RNU6-340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-340P-201ENST00000364005 EIF4ENIF1Q9NRA8 985 aaKnown RBP3.08□□□□□ -1.92
RNU6-340P-201ENST00000364005 AAASQ9NRG9 546 aa3.08□□□□□ -1.92
RNU6-340P-201ENST00000364005 TBC1D12O60347 775 aa3.07□□□□□ -1.92
RNU6-340P-201ENST00000364005 TJAP1Q5JTD0 557 aa3.07□□□□□ -1.92
RNU6-340P-201ENST00000364005 KCTD17Q8N5Z5 321 aa3.07□□□□□ -1.92
RNU6-340P-201ENST00000364005 ZFRQ96KR1 1074 aaKnown RBP3.07□□□□□ -1.92
RNU6-340P-201ENST00000364005 KRTAP4-9Q9BYQ8 210 aa3.07□□□□□ -1.92
RNU6-340P-201ENST00000364005 RABGEF1Q9UJ41 708 aa3.07□□□□□ -1.92
RNU6-340P-201ENST00000364005 CIZ1Q9ULV3 898 aaPredicted RBP3.07□□□□□ -1.92
RNU6-340P-201ENST00000364005 FAM187AA6NFU0 413 aa3.06□□□□□ -1.92
RNU6-340P-201ENST00000364005 C11orf95C9JLR9 678 aaPredicted RBP3.06□□□□□ -1.92
RNU6-340P-201ENST00000364005 FBXO22Q8NEZ5 403 aa3.06□□□□□ -1.92
RNU6-340P-201ENST00000364005 TSR3Q9UJK0 312 aaKnown RBP3.06□□□□□ -1.92
RNU6-340P-201ENST00000364005 LAPTM4BQ86VI4 370 aa3.05□□□□□ -1.92
RNU6-340P-201ENST00000364005 DACH1Q9UI36 760 aa3.05□□□□□ -1.92
RNU6-340P-201ENST00000364005 LORP23490 312 aaPredicted RBP3.04□□□□□ -1.92
RNU6-340P-201ENST00000364005 PROX2Q3B8N5 592 aa3.04□□□□□ -1.92
RNU6-340P-201ENST00000364005 ZSCAN1Q8NBB4 408 aa3.04□□□□□ -1.92
RNU6-340P-201ENST00000364005 GMPR2Q9P2T1 348 aaKnown RBP3.04□□□□□ -1.92
RNU6-340P-201ENST00000364005 HPS5Q9UPZ3 1129 aa3.04□□□□□ -1.92
RNU6-340P-201ENST00000364005 TERTO14746 1132 aaKnown RBP3.03□□□□□ -1.92
RNU6-340P-201ENST00000364005 FOSBP53539 338 aa3.03□□□□□ -1.92
RNU6-340P-201ENST00000364005 PRR20EP86478 221 aa3.03□□□□□ -1.92
RNU6-340P-201ENST00000364005 PRR20CP86479 221 aa3.03□□□□□ -1.92
RNU6-340P-201ENST00000364005 PRR20DP86480 221 aa3.03□□□□□ -1.92
RNU6-340P-201ENST00000364005 PRR20BP86481 221 aa3.03□□□□□ -1.92
RNU6-340P-201ENST00000364005 PRR20AP86496 221 aa3.03□□□□□ -1.92
RNU6-340P-201ENST00000364005 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP3.02□□□□□ -1.93
RNU6-340P-201ENST00000364005 PLPP6Q8IY26 295 aa3.02□□□□□ -1.93
RNU6-340P-201ENST00000364005 ZNF516Q92618 1163 aa3.02□□□□□ -1.93
RNU6-340P-201ENST00000364005 ZFP91Q96JP5 570 aaPredicted RBP3.02□□□□□ -1.93
RNU6-340P-201ENST00000364005 MTRQ99707 1265 aa3.02□□□□□ -1.93
RNU6-340P-201ENST00000364005 ADAM33Q9BZ11 813 aa3.02□□□□□ -1.93
RNU6-340P-201ENST00000364005 IL21Q9HBE4 155 aa3.02□□□□□ -1.93
RNU6-340P-201ENST00000364005 CDKN2AIPQ9NXV6 580 aaPredicted RBP3.02□□□□□ -1.93
RNU6-340P-201ENST00000364005 SLC19A1P41440 591 aa3.01□□□□□ -1.93
RNU6-340P-201ENST00000364005 NKX2-3Q8TAU0 364 aa3.01□□□□□ -1.93
RNU6-340P-201ENST00000364005 KIAA1468Q9P260 1216 aa3.01□□□□□ -1.93
RNU6-340P-201ENST00000364005 TNFRSF10AO00220 468 aa3□□□□□ -1.93
RNU6-340P-201ENST00000364005 GGCXP38435 758 aa3□□□□□ -1.93
RNU6-340P-201ENST00000364005 PPP4CP60510 307 aa3□□□□□ -1.93
RNU6-340P-201ENST00000364005 FOXK1P85037 733 aa3□□□□□ -1.93
RNU6-340P-201ENST00000364005 ZDHHC16Q969W1 377 aa3□□□□□ -1.93
RNU6-340P-201ENST00000364005 LRCH3Q96II8 777 aa3□□□□□ -1.93
RNU6-340P-201ENST00000364005 SEPT9Q9UHD8 586 aaPredicted RBP3□□□□□ -1.93
RNU6-340P-201ENST00000364005 KCNMA1Q12791 1236 aa2.99□□□□□ -1.93
RNU6-340P-201ENST00000364005 SPRYD7Q5W111 196 aa2.99□□□□□ -1.93
RNU6-340P-201ENST00000364005 ZNF598Q86UK7 904 aaKnown RBP2.99□□□□□ -1.93
RNU6-340P-201ENST00000364005 EMID1Q96A84 441 aaPredicted RBP2.99□□□□□ -1.93
RNU6-340P-201ENST00000364005 TMUB1Q9BVT8 246 aa2.99□□□□□ -1.93
RNU6-340P-201ENST00000364005 MFRPQ9BY79 579 aa2.99□□□□□ -1.93
RNU6-340P-201ENST00000364005 PPP1R3GB7ZBB8 358 aa2.98□□□□□ -1.93
RNU6-340P-201ENST00000364005 GDF9O60383 454 aa2.98□□□□□ -1.93
RNU6-340P-201ENST00000364005 COL9A1P20849 921 aa2.98□□□□□ -1.93
RNU6-340P-201ENST00000364005 GMPRP36959 345 aa2.98□□□□□ -1.93
RNU6-340P-201ENST00000364005 GSK3AP49840 483 aa2.98□□□□□ -1.93
RNU6-340P-201ENST00000364005 CRIPAKQ8N1N5 446 aa2.98□□□□□ -1.93
RNU6-340P-201ENST00000364005 RIOK3O14730 519 aaKnown RBP2.97□□□□□ -1.93
RNU6-340P-201ENST00000364005 SNRPBP14678 240 aaKnown RBP2.97□□□□□ -1.93
RNU6-340P-201ENST00000364005 FAM98CQ17RN3 349 aaKnown RBP2.97□□□□□ -1.93
RNU6-340P-201ENST00000364005 OXER1Q8TDS5 423 aa2.97□□□□□ -1.93
RNU6-340P-201ENST00000364005 JPH4Q96JJ6 628 aa2.97□□□□□ -1.93
RNU6-340P-201ENST00000364005 FBXO3Q9UK99 471 aa2.97□□□□□ -1.93
RNU6-340P-201ENST00000364005 AXIN1O15169 862 aa2.96□□□□□ -1.94
RNU6-340P-201ENST00000364005 VGFO15240 615 aaPredicted RBP2.96□□□□□ -1.94
RNU6-340P-201ENST00000364005 VASPP50552 380 aaPredicted RBP2.96□□□□□ -1.94
RNU6-340P-201ENST00000364005 DSG2Q14126 1118 aa2.96□□□□□ -1.94
RNU6-340P-201ENST00000364005 ZNF697Q5TEC3 545 aa2.96□□□□□ -1.94
RNU6-340P-201ENST00000364005 TMEM151AQ8N4L1 468 aa2.96□□□□□ -1.94
RNU6-340P-201ENST00000364005 SPOCK2Q92563 424 aa2.96□□□□□ -1.94
RNU6-340P-201ENST00000364005 UPF1Q92900 1129 aaKnown RBP eCLIP2.96□□□□□ -1.94
RNU6-340P-201ENST00000364005 GDF11O95390 407 aa2.95□□□□□ -1.94
RNU6-340P-201ENST00000364005 SLC16A10Q8TF71 515 aa2.95□□□□□ -1.94
RNU6-340P-201ENST00000364005 TRIM41Q8WV44 630 aa2.95□□□□□ -1.94
RNU6-340P-201ENST00000364005 RNF223E7ERA6 249 aa2.94□□□□□ -1.94
RNU6-340P-201ENST00000364005 ONECUT3O60422 494 aaPredicted RBP2.94□□□□□ -1.94
RNU6-340P-201ENST00000364005 AVPP01185 164 aa2.94□□□□□ -1.94
RNU6-340P-201ENST00000364005 RNF25Q96BH1 459 aaPredicted RBP2.94□□□□□ -1.94
RNU6-340P-201ENST00000364005 GPHNQ9NQX3 736 aaPredicted RBP2.94□□□□□ -1.94
RNU6-340P-201ENST00000364005 RASSF7Q02833 373 aa2.93□□□□□ -1.94
RNU6-340P-201ENST00000364005 LIAT1Q6ZQX7 453 aa2.93□□□□□ -1.94
RNU6-340P-201ENST00000364005 KRTAP4-5Q9BYR2 181 aa2.93□□□□□ -1.94
RNU6-340P-201ENST00000364005 BCL11BQ9C0K0 894 aaPredicted RBP2.93□□□□□ -1.94
RNU6-340P-201ENST00000364005 PPP1R37O75864 691 aa2.92□□□□□ -1.94
RNU6-340P-201ENST00000364005 CTC1Q2NKJ3 1217 aa2.92□□□□□ -1.94
RNU6-340P-201ENST00000364005 GPAT2Q6NUI2 795 aa2.92□□□□□ -1.94
RNU6-340P-201ENST00000364005 SMCPP49901 116 aaPredicted RBP2.91□□□□□ -1.94
RNU6-340P-201ENST00000364005 IRF7Q92985 503 aa2.91□□□□□ -1.94
RNU6-340P-201ENST00000364005 TRIM47Q96LD4 638 aa2.91□□□□□ -1.94
RNU6-340P-201ENST00000364005 TRIM6-TRIM34B2RNG4 842 aa2.9□□□□□ -1.95
RNU6-340P-201ENST00000364005 EVI5O60447 810 aa2.9□□□□□ -1.95
RNU6-340P-201ENST00000364005 APLP1P51693 650 aa2.9□□□□□ -1.95
RNU6-340P-201ENST00000364005 COPS2P61201 443 aa2.9□□□□□ -1.95
RNU6-340P-201ENST00000364005 FOXC1Q12948 553 aa2.9□□□□□ -1.95
RNU6-340P-201ENST00000364005 SAMD7Q7Z3H4 446 aa2.9□□□□□ -1.95
RNU6-340P-201ENST00000364005 ATP13A2Q9NQ11 1180 aa2.9□□□□□ -1.95
RNU6-340P-201ENST00000364005 PKD2L1Q9P0L9 805 aa2.9□□□□□ -1.95
RNU6-340P-201ENST00000364005 STK24Q9Y6E0 443 aa2.9□□□□□ -1.95
RNU6-340P-201ENST00000364005 PPEF1O14829 653 aaPredicted RBP2.89□□□□□ -1.95
RNU6-340P-201ENST00000364005 IGHA1P01876 353 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms