RNA–Protein interactions for RNA: ENST00000358066.8

SEMA6D-204, Transcript of semaphorin 6D, humanhuman

TSL 1 (best) BASIC

Gene SEMA6D, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA6D-204ENST00000358066 SETD5Q9C0A6 1442 aa13.79□□□□□ -0.2
SEMA6D-204ENST00000358066 FHAD1B1AJZ9 1412 aa13.78□□□□□ -0.2
SEMA6D-204ENST00000358066 TEX35Q5T0J7 233 aa13.78□□□□□ -0.2
SEMA6D-204ENST00000358066 ARHGAP35Q9NRY4 1499 aa13.78□□□□□ -0.2
SEMA6D-204ENST00000358066 MLECQ14165 292 aa13.78□□□□□ -0.2
SEMA6D-204ENST00000358066 SLC4A10Q6U841 1118 aa13.78□□□□□ -0.2
SEMA6D-204ENST00000358066 FAM184AQ8NB25 1140 aa13.77□□□□□ -0.21
SEMA6D-204ENST00000358066 CENPJQ9HC77 1338 aaPredicted RBP13.77□□□□□ -0.21
SEMA6D-204ENST00000358066 CHMP4CQ96CF2 233 aa13.77□□□□□ -0.21
SEMA6D-204ENST00000358066 ZNF592Q92610 1267 aa13.76□□□□□ -0.21
SEMA6D-204ENST00000358066 RRP12Q5JTH9 1297 aaKnown RBP13.75□□□□□ -0.21
SEMA6D-204ENST00000358066 PCMTD1Q96MG8 357 aaPredicted RBP13.75□□□□□ -0.21
SEMA6D-204ENST00000358066 BECN2A8MW95 431 aa13.75□□□□□ -0.21
SEMA6D-204ENST00000358066 LMOD3Q0VAK6 560 aa13.75□□□□□ -0.21
SEMA6D-204ENST00000358066 FBXO3Q9UK99 471 aa13.75□□□□□ -0.21
SEMA6D-204ENST00000358066 AKAP17AQ02040 695 aaKnown RBP13.74□□□□□ -0.21
SEMA6D-204ENST00000358066 ATP6V1DQ9Y5K8 247 aa13.74□□□□□ -0.21
SEMA6D-204ENST00000358066 FRAT2O75474 233 aaPredicted RBP13.73□□□□□ -0.21
SEMA6D-204ENST00000358066 CCDC146Q8IYE0 955 aa13.73□□□□□ -0.21
SEMA6D-204ENST00000358066 VSIG10Q8N0Z9 540 aa13.73□□□□□ -0.21
SEMA6D-204ENST00000358066 TSHZ2Q9NRE2 1034 aa13.73□□□□□ -0.21
SEMA6D-204ENST00000358066 TCEAL9Q9UHQ7 104 aa13.73□□□□□ -0.21
SEMA6D-204ENST00000358066 CCDC9Q9Y3X0 531 aaKnown RBP13.72□□□□□ -0.21
SEMA6D-204ENST00000358066 DDX49Q9Y6V7 483 aaKnown RBP13.72□□□□□ -0.21
SEMA6D-204ENST00000358066 ERCC6Q03468 1493 aa13.72□□□□□ -0.21
SEMA6D-204ENST00000358066 AK7Q96M32 723 aa13.72□□□□□ -0.21
SEMA6D-204ENST00000358066 NOM1Q5C9Z4 860 aaKnown RBP13.71□□□□□ -0.21
SEMA6D-204ENST00000358066 RILPL2Q969X0 211 aa13.71□□□□□ -0.21
SEMA6D-204ENST00000358066 BAZ1BQ9UIG0 1483 aaKnown RBP13.71□□□□□ -0.21
SEMA6D-204ENST00000358066 SYNE3Q6ZMZ3 975 aa13.71□□□□□ -0.22
SEMA6D-204ENST00000358066 CCDC47Q96A33 483 aaKnown RBP13.71□□□□□ -0.22
SEMA6D-204ENST00000358066 PKD2Q13563 968 aa13.7□□□□□ -0.22
SEMA6D-204ENST00000358066 KRI1Q8N9T8 703 aaKnown RBP13.7□□□□□ -0.22
SEMA6D-204ENST00000358066 ANKRD20A12PQ8NF67 263 aa13.69□□□□□ -0.22
SEMA6D-204ENST00000358066 TRIM29Q14134 588 aa13.69□□□□□ -0.22
SEMA6D-204ENST00000358066 GSE1Q14687 1217 aa13.69□□□□□ -0.22
SEMA6D-204ENST00000358066 WWC1Q8IX03 1113 aa13.69□□□□□ -0.22
SEMA6D-204ENST00000358066 MCTP1Q6DN14 999 aa13.69□□□□□ -0.22
SEMA6D-204ENST00000358066 RUFY1Q96T51 708 aa13.69□□□□□ -0.22
SEMA6D-204ENST00000358066 CLUAP1Q96AJ1 413 aa13.68□□□□□ -0.22
SEMA6D-204ENST00000358066 CDR1P51861 262 aa13.68□□□□□ -0.22
SEMA6D-204ENST00000358066 AMOTL1Q8IY63 956 aa13.68□□□□□ -0.22
SEMA6D-204ENST00000358066 IPO7O95373 1038 aaKnown RBP13.68□□□□□ -0.22
SEMA6D-204ENST00000358066 HOOK1Q9UJC3 728 aaKnown RBP13.68□□□□□ -0.22
SEMA6D-204ENST00000358066 TERF2IPQ9NYB0 399 aa13.68□□□□□ -0.22
SEMA6D-204ENST00000358066 PHLDB1Q86UU1 1377 aa13.67□□□□□ -0.22
SEMA6D-204ENST00000358066 CENPQQ7L2Z9 268 aaPredicted RBP13.67□□□□□ -0.22
SEMA6D-204ENST00000358066 FAM161AQ3B820 660 aa13.67□□□□□ -0.22
SEMA6D-204ENST00000358066 TRIM34Q9BYJ4 488 aa13.67□□□□□ -0.22
SEMA6D-204ENST00000358066 PDE3BQ13370 1112 aa13.67□□□□□ -0.22
SEMA6D-204ENST00000358066 CTDP1Q9Y5B0 961 aaPredicted RBP13.67□□□□□ -0.22
SEMA6D-204ENST00000358066 ACBD3Q9H3P7 528 aa13.66□□□□□ -0.22
SEMA6D-204ENST00000358066 HOMER1Q86YM7 354 aa13.66□□□□□ -0.22
SEMA6D-204ENST00000358066 ANO2Q9NQ90 1003 aa13.66□□□□□ -0.22
SEMA6D-204ENST00000358066 RB1CC1Q8TDY2 1594 aa13.66□□□□□ -0.22
SEMA6D-204ENST00000358066 FOXD4L6Q3SYB3 417 aaPredicted RBP13.66□□□□□ -0.22
SEMA6D-204ENST00000358066 FOXD4L3Q6VB84 417 aaPredicted RBP13.66□□□□□ -0.22
SEMA6D-204ENST00000358066 GGT6Q6P531 493 aa13.65□□□□□ -0.22
SEMA6D-204ENST00000358066 NOL10Q9BSC4 688 aaKnown RBP13.65□□□□□ -0.22
SEMA6D-204ENST00000358066 FOXD1Q16676 465 aa13.65□□□□□ -0.22
SEMA6D-204ENST00000358066 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.65□□□□□ -0.22
SEMA6D-204ENST00000358066 ANKRD45Q5TZF3 282 aa13.64□□□□□ -0.23
SEMA6D-204ENST00000358066 ARGLU1Q9NWB6 273 aaPredicted RBP13.64□□□□□ -0.23
SEMA6D-204ENST00000358066 LRRFIP1Q32MZ4 808 aaKnown RBP13.64□□□□□ -0.23
SEMA6D-204ENST00000358066 GTF2E1P29083 439 aaPredicted RBP13.63□□□□□ -0.23
SEMA6D-204ENST00000358066 AMPHP49418 695 aa13.63□□□□□ -0.23
SEMA6D-204ENST00000358066 DIAPH3Q9NSV4 1193 aa13.63□□□□□ -0.23
SEMA6D-204ENST00000358066 KIF15Q9NS87 1388 aa13.63□□□□□ -0.23
SEMA6D-204ENST00000358066 TRHP20396 242 aaPredicted RBP13.63□□□□□ -0.23
SEMA6D-204ENST00000358066 RAD21O60216 631 aa13.62□□□□□ -0.23
SEMA6D-204ENST00000358066 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.62□□□□□ -0.23
SEMA6D-204ENST00000358066 NAP1L1P55209 391 aaKnown RBP13.62□□□□□ -0.23
SEMA6D-204ENST00000358066 RUFY2Q8WXA3 655 aa13.62□□□□□ -0.23
SEMA6D-204ENST00000358066 FAM13BQ9NYF5 915 aa13.61□□□□□ -0.23
SEMA6D-204ENST00000358066 MAP7D2Q96T17 732 aa13.6□□□□□ -0.23
SEMA6D-204ENST00000358066 CNKSR2Q8WXI2 1034 aa13.6□□□□□ -0.23
SEMA6D-204ENST00000358066 SLC4A3P48751 1232 aa13.6□□□□□ -0.23
SEMA6D-204ENST00000358066 BICD2Q8TD16 824 aa13.6□□□□□ -0.23
SEMA6D-204ENST00000358066 PDE4AP27815 886 aa13.6□□□□□ -0.23
SEMA6D-204ENST00000358066 CPLX2Q6PUV4 134 aaKnown RBP13.6□□□□□ -0.23
SEMA6D-204ENST00000358066 MNS1Q8NEH6 495 aa13.6□□□□□ -0.23
SEMA6D-204ENST00000358066 SASS6Q6UVJ0 657 aa13.6□□□□□ -0.23
SEMA6D-204ENST00000358066 MPHOSPH9Q99550 1183 aa13.6□□□□□ -0.23
SEMA6D-204ENST00000358066 NGDNQ8NEJ9 315 aaKnown RBP13.59□□□□□ -0.23
SEMA6D-204ENST00000358066 ANKRD30AQ9BXX3 1397 aa13.59□□□□□ -0.23
SEMA6D-204ENST00000358066 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.58□□□□□ -0.23
SEMA6D-204ENST00000358066 LTV1Q96GA3 475 aaPredicted RBP13.58□□□□□ -0.23
SEMA6D-204ENST00000358066 MYBBP1AQ9BQG0 1328 aaKnown RBP13.58□□□□□ -0.24
SEMA6D-204ENST00000358066 C1orf141Q5JVX7 400 aa13.58□□□□□ -0.24
SEMA6D-204ENST00000358066 NUP155O75694 1391 aa13.58□□□□□ -0.24
SEMA6D-204ENST00000358066 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.58□□□□□ -0.24
SEMA6D-204ENST00000358066 DCTN1Q14203 1278 aa13.58□□□□□ -0.24
SEMA6D-204ENST00000358066 CWC15Q9P013 229 aaKnown RBP13.58□□□□□ -0.24
SEMA6D-204ENST00000358066 CT47A1Q5JQC4 288 aaPredicted RBP13.57□□□□□ -0.24
SEMA6D-204ENST00000358066 NFXL1Q6ZNB6 911 aa13.57□□□□□ -0.24
SEMA6D-204ENST00000358066 FBXW7Q969H0 707 aa13.57□□□□□ -0.24
SEMA6D-204ENST00000358066 ZKSCAN1P17029 563 aaPredicted RBP13.57□□□□□ -0.24
SEMA6D-204ENST00000358066 ZKSCAN2Q63HK3 967 aa13.57□□□□□ -0.24
SEMA6D-204ENST00000358066 NLRP13Q86W25 1043 aa13.57□□□□□ -0.24
SEMA6D-204ENST00000358066 IFT57Q9NWB7 429 aa13.57□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms