RNA–Protein interactions for RNA: ENST00000357559.8

FXR1-202, Transcript of FMR1 autosomal homolog 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FXR1, Length 8,711 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-202ENST00000357559 RRP12Q5JTH9 1297 aaKnown RBP13.07□□□□□ -0.32
FXR1-202ENST00000357559 TPM2P07951 284 aa13.07□□□□□ -0.32
FXR1-202ENST00000357559 FAM184AQ8NB25 1140 aa13.07□□□□□ -0.32
FXR1-202ENST00000357559 AKAP17AQ02040 695 aaKnown RBP13.06□□□□□ -0.32
FXR1-202ENST00000357559 GOLGA6L19H0YKK7 550 aa13.06□□□□□ -0.32
FXR1-202ENST00000357559 HDGFP51858 240 aaKnown RBP13.06□□□□□ -0.32
FXR1-202ENST00000357559 DHX16O60231 1041 aaKnown RBP13.06□□□□□ -0.32
FXR1-202ENST00000357559 PHF14O94880 888 aa13.05□□□□□ -0.32
FXR1-202ENST00000357559 SKIDA1Q1XH10 827 aa13.05□□□□□ -0.32
FXR1-202ENST00000357559 RCAN3Q9UKA8 241 aa13.05□□□□□ -0.32
FXR1-202ENST00000357559 ERCC6Q03468 1493 aa13.05□□□□□ -0.32
FXR1-202ENST00000357559 USP35Q9P2H5 1018 aa13.05□□□□□ -0.32
FXR1-202ENST00000357559 KDM4AO75164 1064 aa13.04□□□□□ -0.32
FXR1-202ENST00000357559 HSP90AA2PQ14568 343 aaPredicted RBP13.04□□□□□ -0.32
FXR1-202ENST00000357559 KTN1Q86UP2 1357 aaKnown RBP13.04□□□□□ -0.32
FXR1-202ENST00000357559 NAP1L1P55209 391 aaKnown RBP13.04□□□□□ -0.32
FXR1-202ENST00000357559 CCDC70Q6NSX1 233 aa13.03□□□□□ -0.32
FXR1-202ENST00000357559 CCDC180Q9P1Z9 1646 aa13.03□□□□□ -0.32
FXR1-202ENST00000357559 NECTIN2Q92692 538 aa13.03□□□□□ -0.32
FXR1-202ENST00000357559 SLC4A3P48751 1232 aa13.02□□□□□ -0.32
FXR1-202ENST00000357559 ROCK2O75116 1388 aaKnown RBP13.02□□□□□ -0.33
FXR1-202ENST00000357559 APPP05067 770 aa13.02□□□□□ -0.33
FXR1-202ENST00000357559 TPM1P09493 284 aa13.02□□□□□ -0.33
FXR1-202ENST00000357559 AMPHP49418 695 aa13.02□□□□□ -0.33
FXR1-202ENST00000357559 BECN2A8MW95 431 aa13.01□□□□□ -0.33
FXR1-202ENST00000357559 DHX37Q8IY37 1157 aaKnown RBP13.01□□□□□ -0.33
FXR1-202ENST00000357559 SYTL4Q96C24 671 aaPredicted RBP13.01□□□□□ -0.33
FXR1-202ENST00000357559 RRP7AQ9Y3A4 280 aaKnown RBP13.01□□□□□ -0.33
FXR1-202ENST00000357559 ST18O60284 1047 aa13.01□□□□□ -0.33
FXR1-202ENST00000357559 PMFBP1Q8TBY8 1022 aa13.01□□□□□ -0.33
FXR1-202ENST00000357559 ZFYVE27Q5T4F4 411 aa13□□□□□ -0.33
FXR1-202ENST00000357559 EVA1CP58658 441 aa13□□□□□ -0.33
FXR1-202ENST00000357559 MTMR7Q9Y216 660 aa13□□□□□ -0.33
FXR1-202ENST00000357559 NGDNQ8NEJ9 315 aaKnown RBP13□□□□□ -0.33
FXR1-202ENST00000357559 FYB1O15117 783 aa12.99□□□□□ -0.33
FXR1-202ENST00000357559 HMMRO75330 724 aa12.99□□□□□ -0.33
FXR1-202ENST00000357559 CCDC43Q96MW1 224 aaKnown RBP12.99□□□□□ -0.33
FXR1-202ENST00000357559 ELL2O00472 640 aaPredicted RBP12.99□□□□□ -0.33
FXR1-202ENST00000357559 TIMELESSQ9UNS1 1208 aa12.99□□□□□ -0.33
FXR1-202ENST00000357559 CEP162Q5TB80 1403 aa12.99□□□□□ -0.33
FXR1-202ENST00000357559 ODF2Q5BJF6 829 aa12.98□□□□□ -0.33
FXR1-202ENST00000357559 PHF23Q9BUL5 403 aaPredicted RBP12.98□□□□□ -0.33
FXR1-202ENST00000357559 CT47A1Q5JQC4 288 aaPredicted RBP12.98□□□□□ -0.33
FXR1-202ENST00000357559 HSPA5P11021 654 aaKnown RBP12.98□□□□□ -0.33
FXR1-202ENST00000357559 VPS37DQ86XT2 251 aa12.98□□□□□ -0.33
FXR1-202ENST00000357559 NOL10Q9BSC4 688 aaKnown RBP12.98□□□□□ -0.33
FXR1-202ENST00000357559 VSIG10Q8N0Z9 540 aa12.98□□□□□ -0.33
FXR1-202ENST00000357559 BCL2L13Q9BXK5 485 aa12.98□□□□□ -0.33
FXR1-202ENST00000357559 CCNB3Q8WWL7 1395 aa12.98□□□□□ -0.33
FXR1-202ENST00000357559 HOMER1Q86YM7 354 aa12.98□□□□□ -0.33
FXR1-202ENST00000357559 MEX3CQ5U5Q3 659 aaKnown RBP12.98□□□□□ -0.33
FXR1-202ENST00000357559 TCERG1O14776 1098 aaKnown RBP12.97□□□□□ -0.33
FXR1-202ENST00000357559 TTLL5Q6EMB2 1281 aa12.97□□□□□ -0.33
FXR1-202ENST00000357559 SYNE3Q6ZMZ3 975 aa12.97□□□□□ -0.33
FXR1-202ENST00000357559 ANKRD45Q5TZF3 282 aa12.96□□□□□ -0.33
FXR1-202ENST00000357559 GPS2Q13227 327 aa12.96□□□□□ -0.33
FXR1-202ENST00000357559 AMOTL1Q8IY63 956 aa12.96□□□□□ -0.33
FXR1-202ENST00000357559 PLCD4Q9BRC7 762 aa12.96□□□□□ -0.34
FXR1-202ENST00000357559 MAP7D2Q96T17 732 aa12.95□□□□□ -0.34
FXR1-202ENST00000357559 TRIM29Q14134 588 aa12.95□□□□□ -0.34
FXR1-202ENST00000357559 GOLGA3Q08378 1498 aa12.95□□□□□ -0.34
FXR1-202ENST00000357559 HSP90AB2PQ58FF8 381 aa12.95□□□□□ -0.34
FXR1-202ENST00000357559 DDX49Q9Y6V7 483 aaKnown RBP12.95□□□□□ -0.34
FXR1-202ENST00000357559 EIF2S2P20042 333 aaKnown RBP12.95□□□□□ -0.34
FXR1-202ENST00000357559 PAF1Q8N7H5 531 aa12.94□□□□□ -0.34
FXR1-202ENST00000357559 RUFY1Q96T51 708 aa12.94□□□□□ -0.34
FXR1-202ENST00000357559 NFXL1Q6ZNB6 911 aa12.94□□□□□ -0.34
FXR1-202ENST00000357559 ANO2Q9NQ90 1003 aa12.94□□□□□ -0.34
FXR1-202ENST00000357559 KIF3AQ9Y496 699 aa12.94□□□□□ -0.34
FXR1-202ENST00000357559 IPO7O95373 1038 aaKnown RBP12.92□□□□□ -0.34
FXR1-202ENST00000357559 EPS15P42566 896 aa12.92□□□□□ -0.34
FXR1-202ENST00000357559 FAM13BQ9NYF5 915 aa12.92□□□□□ -0.34
FXR1-202ENST00000357559 TMEM132AQ24JP5 1023 aa12.92□□□□□ -0.34
FXR1-202ENST00000357559 C1orf141Q5JVX7 400 aa12.91□□□□□ -0.34
FXR1-202ENST00000357559 CENPJQ9HC77 1338 aaPredicted RBP12.91□□□□□ -0.34
FXR1-202ENST00000357559 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.91□□□□□ -0.34
FXR1-202ENST00000357559 IPO9Q96P70 1041 aaKnown RBP12.91□□□□□ -0.34
FXR1-202ENST00000357559 PLIN1O60240 522 aa12.9□□□□□ -0.34
FXR1-202ENST00000357559 MYO15BQ96JP2 1530 aa12.9□□□□□ -0.34
FXR1-202ENST00000357559 BICD2Q8TD16 824 aa12.9□□□□□ -0.34
FXR1-202ENST00000357559 PKD2Q13563 968 aa12.9□□□□□ -0.34
FXR1-202ENST00000357559 DIAPH3Q9NSV4 1193 aa12.9□□□□□ -0.34
FXR1-202ENST00000357559 TEX35Q5T0J7 233 aa12.89□□□□□ -0.35
FXR1-202ENST00000357559 DDX11L8A8MPP1 907 aa12.89□□□□□ -0.35
FXR1-202ENST00000357559 PDILTQ8N807 584 aa12.88□□□□□ -0.35
FXR1-202ENST00000357559 ANKRD20A12PQ8NF67 263 aa12.88□□□□□ -0.35
FXR1-202ENST00000357559 AK7Q96M32 723 aa12.88□□□□□ -0.35
FXR1-202ENST00000357559 BAZ1BQ9UIG0 1483 aaKnown RBP12.88□□□□□ -0.35
FXR1-202ENST00000357559 CCDC27Q2M243 656 aa12.88□□□□□ -0.35
FXR1-202ENST00000357559 CPLX1O14810 134 aa12.88□□□□□ -0.35
FXR1-202ENST00000357559 C9orf78Q9NZ63 289 aaPredicted RBP12.88□□□□□ -0.35
FXR1-202ENST00000357559 CCDC47Q96A33 483 aaKnown RBP12.87□□□□□ -0.35
FXR1-202ENST00000357559 IKQ13123 557 aaPredicted RBP12.87□□□□□ -0.35
FXR1-202ENST00000357559 CAGE1Q8TC20 777 aa12.87□□□□□ -0.35
FXR1-202ENST00000357559 R3HCC1Q9Y3T6 440 aaKnown RBP12.87□□□□□ -0.35
FXR1-202ENST00000357559 PPP1R1BQ9UD71 204 aaPredicted RBP12.86□□□□□ -0.35
FXR1-202ENST00000357559 ERICH2A1L162 156 aa12.86□□□□□ -0.35
FXR1-202ENST00000357559 IBSPP21815 317 aaPredicted RBP12.85□□□□□ -0.35
FXR1-202ENST00000357559 EID1Q9Y6B2 187 aa12.85□□□□□ -0.35
FXR1-202ENST00000357559 VPS37CA5D8V6 355 aaPredicted RBP12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 92.2 ms