RNA–Protein interactions for RNA: ENST00000356141.8

NPAS3-202, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,802 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-202ENST00000356141 GGT6Q6P531 493 aa24.62■■□□□ 1.53
NPAS3-202ENST00000356141 CCDC144AA2RUR9 1427 aa24.62■■□□□ 1.53
NPAS3-202ENST00000356141 CD109Q6YHK3 1445 aa24.62■■□□□ 1.53
NPAS3-202ENST00000356141 NBPF1Q3BBV0 1214 aa24.61■■□□□ 1.53
NPAS3-202ENST00000356141 SENP3-EIF4A1A0A087X0R7 540 aa24.6■■□□□ 1.53
NPAS3-202ENST00000356141 USP47Q96K76 1375 aa24.57■■□□□ 1.52
NPAS3-202ENST00000356141 PLA2R1Q13018 1463 aa24.57■■□□□ 1.52
NPAS3-202ENST00000356141 DUOX2Q9NRD8 1548 aa24.56■■□□□ 1.52
NPAS3-202ENST00000356141 KIF7Q2M1P5 1343 aa24.56■■□□□ 1.52
NPAS3-202ENST00000356141 ST20-MTHFSA0A0A6YYL1 179 aa24.55■■□□□ 1.52
NPAS3-202ENST00000356141 CHGAP10645 457 aaKnown RBP24.53■■□□□ 1.52
NPAS3-202ENST00000356141 CCDC184Q52MB2 194 aa24.53■■□□□ 1.52
NPAS3-202ENST00000356141 ZFYVE16Q7Z3T8 1539 aa24.53■■□□□ 1.52
NPAS3-202ENST00000356141 ABCA9Q8IUA7 1624 aa24.53■■□□□ 1.52
NPAS3-202ENST00000356141 MAST1Q9Y2H9 1570 aa24.52■■□□□ 1.52
NPAS3-202ENST00000356141 FAM69CQ0P6D2 419 aa24.52■■□□□ 1.52
NPAS3-202ENST00000356141 CCDC7Q96M83 1385 aa24.52■■□□□ 1.52
NPAS3-202ENST00000356141 KDM5DQ9BY66 1539 aa24.5■■□□□ 1.51
NPAS3-202ENST00000356141 ROCK2O75116 1388 aaKnown RBP24.5■■□□□ 1.51
NPAS3-202ENST00000356141 PLXNC1O60486 1568 aa24.5■■□□□ 1.51
NPAS3-202ENST00000356141 ATP7AQ04656 1500 aa24.5■■□□□ 1.51
NPAS3-202ENST00000356141 ERICH6Q7L0X2 663 aa24.49■■□□□ 1.51
NPAS3-202ENST00000356141 ERBINQ96RT1 1412 aa24.49■■□□□ 1.51
NPAS3-202ENST00000356141 UNC13BO14795 1591 aa24.45■■□□□ 1.5
NPAS3-202ENST00000356141 NUTM2DQ5VT03 806 aaPredicted RBP24.44■■□□□ 1.5
NPAS3-202ENST00000356141 CFAP65Q6ZU64 1925 aaKnown RBP24.44■■□□□ 1.5
NPAS3-202ENST00000356141 SPATA31E1Q6ZUB1 1445 aa24.43■■□□□ 1.5
NPAS3-202ENST00000356141 FAM9BQ8IZU0 186 aa24.41■■□□□ 1.5
NPAS3-202ENST00000356141 A2MP01023 1474 aa24.4■■□□□ 1.5
NPAS3-202ENST00000356141 UGGT1Q9NYU2 1555 aa24.4■■□□□ 1.5
NPAS3-202ENST00000356141 DHX29Q7Z478 1369 aaKnown RBP24.39■■□□□ 1.5
NPAS3-202ENST00000356141 IQGAP3Q86VI3 1631 aa24.39■■□□□ 1.5
NPAS3-202ENST00000356141 KANK1Q14678 1352 aa24.39■■□□□ 1.5
NPAS3-202ENST00000356141 RIMBP3CA6NJZ7 1639 aa24.39■■□□□ 1.49
NPAS3-202ENST00000356141 RIMBP3BA6NNM3 1639 aa24.39■■□□□ 1.49
NPAS3-202ENST00000356141 RIMBP3Q9UFD9 1639 aa24.39■■□□□ 1.49
NPAS3-202ENST00000356141 RTEL1-TNFRSF6BF6WH68 1400 aa24.38■■□□□ 1.49
NPAS3-202ENST00000356141 BCORL1Q5H9F3 1711 aa24.37■■□□□ 1.49
NPAS3-202ENST00000356141 CNTLNQ9NXG0 1405 aa24.37■■□□□ 1.49
NPAS3-202ENST00000356141 BCL11AQ9H165 835 aa24.36■■□□□ 1.49
NPAS3-202ENST00000356141 ZNF518AQ6AHZ1 1483 aa24.36■■□□□ 1.49
NPAS3-202ENST00000356141 ARAP3Q8WWN8 1544 aa24.35■■□□□ 1.49
NPAS3-202ENST00000356141 MLECQ14165 292 aa24.35■■□□□ 1.49
NPAS3-202ENST00000356141 INO80Q9ULG1 1556 aaPredicted RBP24.34■■□□□ 1.49
NPAS3-202ENST00000356141 WASHC2CQ9Y4E1 1318 aa24.34■■□□□ 1.49
NPAS3-202ENST00000356141 KIDINS220Q9ULH0 1771 aa24.34■■□□□ 1.49
NPAS3-202ENST00000356141 TSPOAP1O95153 1857 aa24.34■■□□□ 1.49
NPAS3-202ENST00000356141 E9PCH4 1651 aa24.33■■□□□ 1.49
NPAS3-202ENST00000356141 HNRNPUQ00839 825 aaKnown RBP eCLIP24.33■■□□□ 1.49
NPAS3-202ENST00000356141 PRAG1Q86YV5 1406 aa24.33■■□□□ 1.49
NPAS3-202ENST00000356141 POGZQ7Z3K3 1410 aa24.33■■□□□ 1.48
NPAS3-202ENST00000356141 ATP10AO60312 1499 aa24.32■■□□□ 1.48
NPAS3-202ENST00000356141 PRKRIP1Q9H875 184 aaPredicted RBP24.32■■□□□ 1.48
NPAS3-202ENST00000356141 MRS2Q9HD23 443 aa24.32■■□□□ 1.48
NPAS3-202ENST00000356141 RALGAPBQ86X10 1494 aa24.32■■□□□ 1.48
NPAS3-202ENST00000356141 MAGI2Q86UL8 1455 aa24.3■■□□□ 1.48
NPAS3-202ENST00000356141 CCER2I3L3R5 266 aa24.3■■□□□ 1.48
NPAS3-202ENST00000356141 UHRF1BP1Q6BDS2 1440 aa24.29■■□□□ 1.48
NPAS3-202ENST00000356141 YEATS2Q9ULM3 1422 aa24.29■■□□□ 1.48
NPAS3-202ENST00000356141 DAXXQ9UER7 740 aaPredicted RBP24.29■■□□□ 1.48
NPAS3-202ENST00000356141 KDM5CP41229 1560 aa24.29■■□□□ 1.48
NPAS3-202ENST00000356141 BCANQ96GW7 911 aa24.27■■□□□ 1.48
NPAS3-202ENST00000356141 TRHP20396 242 aaPredicted RBP24.25■■□□□ 1.47
NPAS3-202ENST00000356141 CFAP70Q5T0N1 1121 aa24.25■■□□□ 1.47
NPAS3-202ENST00000356141 ADGRF5Q8IZF2 1346 aa24.24■■□□□ 1.47
NPAS3-202ENST00000356141 CLTCL1P53675 1640 aa24.22■■□□□ 1.47
NPAS3-202ENST00000356141 PLPPR3Q6T4P5 718 aa24.21■■□□□ 1.47
NPAS3-202ENST00000356141 CEP152O94986 1710 aa24.2■■□□□ 1.46
NPAS3-202ENST00000356141 DISP3Q9P2K9 1392 aa24.2■■□□□ 1.46
NPAS3-202ENST00000356141 MROH1Q8NDA8 1641 aa24.2■■□□□ 1.46
NPAS3-202ENST00000356141 ABCA6Q8N139 1617 aa24.19■■□□□ 1.46
NPAS3-202ENST00000356141 PRDM15P57071 1507 aaPredicted RBP24.18■■□□□ 1.46
NPAS3-202ENST00000356141 CC2D1BQ5T0F9 858 aaKnown RBP24.18■■□□□ 1.46
NPAS3-202ENST00000356141 FRMPD1Q5SYB0 1578 aa24.18■■□□□ 1.46
NPAS3-202ENST00000356141 HECW2Q9P2P5 1572 aa24.16■■□□□ 1.46
NPAS3-202ENST00000356141 TMEM132EQ6IEE7 984 aa24.16■■□□□ 1.46
NPAS3-202ENST00000356141 FBXO31Q5XUX0 539 aaPredicted RBP24.16■■□□□ 1.46
NPAS3-202ENST00000356141 TRPM1Q7Z4N2 1603 aa24.16■■□□□ 1.46
NPAS3-202ENST00000356141 SPHKAPQ2M3C7 1700 aa24.15■■□□□ 1.46
NPAS3-202ENST00000356141 TESK2Q96S53 571 aa24.14■■□□□ 1.46
NPAS3-202ENST00000356141 NPATQ14207 1427 aa24.14■■□□□ 1.46
NPAS3-202ENST00000356141 PPRC1Q5VV67 1664 aaKnown RBP24.14■■□□□ 1.45
NPAS3-202ENST00000356141 DEPDC5O75140 1603 aa24.14■■□□□ 1.45
NPAS3-202ENST00000356141 TRPM2O94759 1503 aa24.13■■□□□ 1.45
NPAS3-202ENST00000356141 TET3O43151 1660 aa24.13■■□□□ 1.45
NPAS3-202ENST00000356141 IRX6P78412 446 aaPredicted RBP24.12■■□□□ 1.45
NPAS3-202ENST00000356141 MLH3Q9UHC1 1453 aa24.12■■□□□ 1.45
NPAS3-202ENST00000356141 SALL2Q9Y467 1007 aaPredicted RBP24.12■■□□□ 1.45
NPAS3-202ENST00000356141 PTPRTO14522 1441 aa24.12■■□□□ 1.45
NPAS3-202ENST00000356141 SAFB2Q14151 953 aaKnown RBP eCLIP24.11■■□□□ 1.45
NPAS3-202ENST00000356141 TRAK1Q9UPV9 953 aa24.11■■□□□ 1.45
NPAS3-202ENST00000356141 NEO1Q92859 1461 aa24.1■■□□□ 1.45
NPAS3-202ENST00000356141 PANK3Q9H999 370 aa24.1■■□□□ 1.45
NPAS3-202ENST00000356141 CFAP74Q9C0B2 1584 aa24.08■■□□□ 1.45
NPAS3-202ENST00000356141 NOS1P29475 1434 aa24.08■■□□□ 1.44
NPAS3-202ENST00000356141 FKBP8Q14318 412 aa24.07■■□□□ 1.44
NPAS3-202ENST00000356141 EFCAB6Q5THR3 1501 aa24.07■■□□□ 1.44
NPAS3-202ENST00000356141 VWDEQ8N2E2 1590 aa24.07■■□□□ 1.44
NPAS3-202ENST00000356141 TMF1P82094 1093 aa24.06■■□□□ 1.44
NPAS3-202ENST00000356141 SUPT16HQ9Y5B9 1047 aaKnown RBP24.06■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms