RNA–Protein interactions for RNA: ENST00000355547.9

PDZD3-202, Transcript of PDZ domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDZD3, Length 2,252 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD3-202ENST00000355547 RIMBP3CA6NJZ7 1639 aa24.47■■□□□ 1.51
PDZD3-202ENST00000355547 RIMBP3BA6NNM3 1639 aa24.47■■□□□ 1.51
PDZD3-202ENST00000355547 RIMBP3Q9UFD9 1639 aa24.47■■□□□ 1.51
PDZD3-202ENST00000355547 ST20-MTHFSA0A0A6YYL1 179 aa24.47■■□□□ 1.51
PDZD3-202ENST00000355547 HNRNPMP52272 730 aaKnown RBP eCLIP24.47■■□□□ 1.51
PDZD3-202ENST00000355547 TMC1Q8TDI8 760 aa24.46■■□□□ 1.51
PDZD3-202ENST00000355547 BRD4O60885 1362 aaPredicted RBP24.46■■□□□ 1.51
PDZD3-202ENST00000355547 RALBP1Q15311 655 aa24.44■■□□□ 1.5
PDZD3-202ENST00000355547 DCAF11Q8TEB1 546 aa24.44■■□□□ 1.5
PDZD3-202ENST00000355547 CCDC141Q6ZP82 1450 aa24.44■■□□□ 1.5
PDZD3-202ENST00000355547 RSPH4AQ5TD94 716 aa24.44■■□□□ 1.5
PDZD3-202ENST00000355547 CNGB1Q14028 1251 aaPredicted RBP24.43■■□□□ 1.5
PDZD3-202ENST00000355547 KDM2AQ9Y2K7 1162 aa24.43■■□□□ 1.5
PDZD3-202ENST00000355547 MYBBP1AQ9BQG0 1328 aaKnown RBP24.42■■□□□ 1.5
PDZD3-202ENST00000355547 E9PCH4 1651 aa24.42■■□□□ 1.5
PDZD3-202ENST00000355547 FAM135AQ9P2D6 1515 aa24.42■■□□□ 1.5
PDZD3-202ENST00000355547 SAMD9LQ8IVG5 1584 aa24.41■■□□□ 1.5
PDZD3-202ENST00000355547 CYB5RLQ6IPT4 315 aa24.41■■□□□ 1.5
PDZD3-202ENST00000355547 PREX2Q70Z35 1606 aa24.38■■□□□ 1.49
PDZD3-202ENST00000355547 PRAG1Q86YV5 1406 aa24.38■■□□□ 1.49
PDZD3-202ENST00000355547 CDC42BPBQ9Y5S2 1711 aa24.37■■□□□ 1.49
PDZD3-202ENST00000355547 ERICH6Q7L0X2 663 aa24.36■■□□□ 1.49
PDZD3-202ENST00000355547 TRPM1Q7Z4N2 1603 aa24.35■■□□□ 1.49
PDZD3-202ENST00000355547 GPRASP1Q5JY77 1395 aa24.34■■□□□ 1.49
PDZD3-202ENST00000355547 MAST1Q9Y2H9 1570 aa24.34■■□□□ 1.49
PDZD3-202ENST00000355547 CCDC144AA2RUR9 1427 aa24.33■■□□□ 1.49
PDZD3-202ENST00000355547 CCDC136Q96JN2 1154 aa24.33■■□□□ 1.49
PDZD3-202ENST00000355547 UNC13BO14795 1591 aa24.32■■□□□ 1.48
PDZD3-202ENST00000355547 PARD3Q8TEW0 1356 aa24.32■■□□□ 1.48
PDZD3-202ENST00000355547 PLA2R1Q13018 1463 aa24.31■■□□□ 1.48
PDZD3-202ENST00000355547 DNAJC5Q9H3Z4 198 aa24.31■■□□□ 1.48
PDZD3-202ENST00000355547 ABCC2Q92887 1545 aa24.3■■□□□ 1.48
PDZD3-202ENST00000355547 NLRP13Q86W25 1043 aa24.29■■□□□ 1.48
PDZD3-202ENST00000355547 LAMC1P11047 1609 aa24.28■■□□□ 1.48
PDZD3-202ENST00000355547 PER1O15534 1290 aaPredicted RBP24.28■■□□□ 1.48
PDZD3-202ENST00000355547 SYCP2Q9BX26 1530 aa24.26■■□□□ 1.47
PDZD3-202ENST00000355547 A2MP01023 1474 aa24.26■■□□□ 1.47
PDZD3-202ENST00000355547 WASHC2CQ9Y4E1 1318 aa24.25■■□□□ 1.47
PDZD3-202ENST00000355547 NBPF1Q3BBV0 1214 aa24.24■■□□□ 1.47
PDZD3-202ENST00000355547 UHRF1BP1LA0JNW5 1464 aa24.24■■□□□ 1.47
PDZD3-202ENST00000355547 SENP3-EIF4A1A0A087X0R7 540 aa24.23■■□□□ 1.47
PDZD3-202ENST00000355547 PDE3BQ13370 1112 aa24.23■■□□□ 1.47
PDZD3-202ENST00000355547 COL17A1Q9UMD9 1497 aaPredicted RBP24.23■■□□□ 1.47
PDZD3-202ENST00000355547 PLXNC1O60486 1568 aa24.23■■□□□ 1.47
PDZD3-202ENST00000355547 PRDM15P57071 1507 aaPredicted RBP24.23■■□□□ 1.47
PDZD3-202ENST00000355547 IQGAP3Q86VI3 1631 aa24.22■■□□□ 1.47
PDZD3-202ENST00000355547 ATP10AO60312 1499 aa24.22■■□□□ 1.47
PDZD3-202ENST00000355547 INSRP06213 1382 aa24.22■■□□□ 1.47
PDZD3-202ENST00000355547 TTC37Q6PGP7 1564 aa24.21■■□□□ 1.47
PDZD3-202ENST00000355547 RRP1P56182 461 aaKnown RBP24.21■■□□□ 1.47
PDZD3-202ENST00000355547 TESK2Q96S53 571 aa24.21■■□□□ 1.47
PDZD3-202ENST00000355547 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.21■■□□□ 1.47
PDZD3-202ENST00000355547 ARHGAP5Q13017 1502 aa24.21■■□□□ 1.47
PDZD3-202ENST00000355547 PLEKHH2Q8IVE3 1493 aa24.2■■□□□ 1.47
PDZD3-202ENST00000355547 RGL3Q3MIN7 710 aa24.2■■□□□ 1.46
PDZD3-202ENST00000355547 MYT1LQ9UL68 1186 aa24.2■■□□□ 1.46
PDZD3-202ENST00000355547 ZMYM4Q5VZL5 1548 aa24.19■■□□□ 1.46
PDZD3-202ENST00000355547 ZCCHC11Q5TAX3 1644 aaKnown RBP24.18■■□□□ 1.46
PDZD3-202ENST00000355547 MAGI2Q86UL8 1455 aa24.17■■□□□ 1.46
PDZD3-202ENST00000355547 EIF2AK4Q9P2K8 1649 aaKnown RBP24.17■■□□□ 1.46
PDZD3-202ENST00000355547 RCAN3Q9UKA8 241 aa24.17■■□□□ 1.46
PDZD3-202ENST00000355547 NOP58Q9Y2X3 529 aaKnown RBP24.17■■□□□ 1.46
PDZD3-202ENST00000355547 DISP3Q9P2K9 1392 aa24.16■■□□□ 1.46
PDZD3-202ENST00000355547 DUOX2Q9NRD8 1548 aa24.15■■□□□ 1.46
PDZD3-202ENST00000355547 ERBINQ96RT1 1412 aa24.14■■□□□ 1.46
PDZD3-202ENST00000355547 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.14■■□□□ 1.46
PDZD3-202ENST00000355547 NPM1P06748 294 aaKnown RBP eCLIP24.12■■□□□ 1.45
PDZD3-202ENST00000355547 MYO5CQ9NQX4 1742 aa24.12■■□□□ 1.45
PDZD3-202ENST00000355547 BLMP54132 1417 aaPredicted RBP24.11■■□□□ 1.45
PDZD3-202ENST00000355547 EXOC6Q8TAG9 804 aa24.1■■□□□ 1.45
PDZD3-202ENST00000355547 PANK3Q9H999 370 aa24.09■■□□□ 1.45
PDZD3-202ENST00000355547 IPO9Q96P70 1041 aaKnown RBP24.09■■□□□ 1.45
PDZD3-202ENST00000355547 TMF1P82094 1093 aa24.08■■□□□ 1.45
PDZD3-202ENST00000355547 PAK3O75914 559 aaPredicted RBP24.08■■□□□ 1.44
PDZD3-202ENST00000355547 PRKCSHP14314 528 aaPredicted RBP24.08■■□□□ 1.44
PDZD3-202ENST00000355547 ANP32AP39687 249 aaKnown RBP24.08■■□□□ 1.44
PDZD3-202ENST00000355547 RNF17Q9BXT8 1623 aaKnown RBP24.07■■□□□ 1.44
PDZD3-202ENST00000355547 CC2D1BQ5T0F9 858 aaKnown RBP24.05■■□□□ 1.44
PDZD3-202ENST00000355547 PLCH2O75038 1416 aa24.05■■□□□ 1.44
PDZD3-202ENST00000355547 SALL2Q9Y467 1007 aaPredicted RBP24.05■■□□□ 1.44
PDZD3-202ENST00000355547 TCERG1O14776 1098 aaKnown RBP24.04■■□□□ 1.44
PDZD3-202ENST00000355547 CDCA7LQ96GN5 454 aa24.04■■□□□ 1.44
PDZD3-202ENST00000355547 ASXL2Q76L83 1435 aa24.03■■□□□ 1.44
PDZD3-202ENST00000355547 EFCAB2Q5VUJ9 269 aa23.99■■□□□ 1.43
PDZD3-202ENST00000355547 WDR7Q9Y4E6 1490 aa23.99■■□□□ 1.43
PDZD3-202ENST00000355547 MS4A1P11836 297 aa23.98■■□□□ 1.43
PDZD3-202ENST00000355547 ABCC1P33527 1531 aa23.97■■□□□ 1.43
PDZD3-202ENST00000355547 MADDQ8WXG6 1647 aa23.96■■□□□ 1.43
PDZD3-202ENST00000355547 STAC3Q96MF2 364 aa23.96■■□□□ 1.43
PDZD3-202ENST00000355547 ZBTB47Q9UFB7 747 aaPredicted RBP23.95■■□□□ 1.43
PDZD3-202ENST00000355547 IQGAP1P46940 1657 aa23.95■■□□□ 1.42
PDZD3-202ENST00000355547 TRAPPC8Q9Y2L5 1435 aa23.94■■□□□ 1.42
PDZD3-202ENST00000355547 TRPM2O94759 1503 aa23.92■■□□□ 1.42
PDZD3-202ENST00000355547 RTEL1-TNFRSF6BF6WH68 1400 aa23.92■■□□□ 1.42
PDZD3-202ENST00000355547 PTPRTO14522 1441 aa23.92■■□□□ 1.42
PDZD3-202ENST00000355547 SCAPERQ9BY12 1400 aa23.92■■□□□ 1.42
PDZD3-202ENST00000355547 PDE4AP27815 886 aa23.91■■□□□ 1.42
PDZD3-202ENST00000355547 ADAMTS8Q9UP79 889 aa23.91■■□□□ 1.42
PDZD3-202ENST00000355547 DEKP35659 375 aaKnown RBP23.91■■□□□ 1.42
PDZD3-202ENST00000355547 BACH2Q9BYV9 841 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms