RNA–Protein interactions for RNA: ENST00000354547.7

COL13A1-201, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-201ENST00000354547 FAM135AQ9P2D6 1515 aa26.42■■□□□ 1.82
COL13A1-201ENST00000354547 ARHGAP5Q13017 1502 aa26.41■■□□□ 1.82
COL13A1-201ENST00000354547 SYCP2Q9BX26 1530 aa26.4■■□□□ 1.82
COL13A1-201ENST00000354547 ARHGEF12Q9NZN5 1544 aa26.4■■□□□ 1.82
COL13A1-201ENST00000354547 SMG6Q86US8 1419 aaKnown RBP26.39■■□□□ 1.82
COL13A1-201ENST00000354547 CDC42BPBQ9Y5S2 1711 aa26.39■■□□□ 1.82
COL13A1-201ENST00000354547 RSPH4AQ5TD94 716 aa26.38■■□□□ 1.81
COL13A1-201ENST00000354547 KDM5DQ9BY66 1539 aa26.37■■□□□ 1.81
COL13A1-201ENST00000354547 ARHGEF5Q12774 1597 aa26.37■■□□□ 1.81
COL13A1-201ENST00000354547 MYBBP1AQ9BQG0 1328 aaKnown RBP26.36■■□□□ 1.81
COL13A1-201ENST00000354547 CCDC136Q96JN2 1154 aa26.35■■□□□ 1.81
COL13A1-201ENST00000354547 CC2D1BQ5T0F9 858 aaKnown RBP26.35■■□□□ 1.81
COL13A1-201ENST00000354547 ERICH6Q7L0X2 663 aa26.34■■□□□ 1.81
COL13A1-201ENST00000354547 PLEKHH2Q8IVE3 1493 aa26.33■■□□□ 1.81
COL13A1-201ENST00000354547 RALBP1Q15311 655 aa26.33■■□□□ 1.8
COL13A1-201ENST00000354547 TTC37Q6PGP7 1564 aa26.32■■□□□ 1.8
COL13A1-201ENST00000354547 PREX2Q70Z35 1606 aa26.31■■□□□ 1.8
COL13A1-201ENST00000354547 PRAG1Q86YV5 1406 aa26.31■■□□□ 1.8
COL13A1-201ENST00000354547 FANCIQ9NVI1 1328 aa26.3■■□□□ 1.8
COL13A1-201ENST00000354547 PLA2R1Q13018 1463 aa26.29■■□□□ 1.8
COL13A1-201ENST00000354547 ERCC6L2Q5T890 1561 aa26.29■■□□□ 1.8
COL13A1-201ENST00000354547 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP26.27■■□□□ 1.8
COL13A1-201ENST00000354547 CHD1O14646 1710 aa26.27■■□□□ 1.8
COL13A1-201ENST00000354547 BRD4O60885 1362 aaPredicted RBP26.27■■□□□ 1.8
COL13A1-201ENST00000354547 KTN1Q86UP2 1357 aaKnown RBP26.26■■□□□ 1.79
COL13A1-201ENST00000354547 A2MP01023 1474 aa26.24■■□□□ 1.79
COL13A1-201ENST00000354547 NLRP13Q86W25 1043 aa26.24■■□□□ 1.79
COL13A1-201ENST00000354547 PANK3Q9H999 370 aa26.24■■□□□ 1.79
COL13A1-201ENST00000354547 DISP3Q9P2K9 1392 aa26.23■■□□□ 1.79
COL13A1-201ENST00000354547 LRPPRCP42704 1394 aaKnown RBP26.21■■□□□ 1.79
COL13A1-201ENST00000354547 PER1O15534 1290 aaPredicted RBP26.2■■□□□ 1.79
COL13A1-201ENST00000354547 TESK2Q96S53 571 aa26.2■■□□□ 1.78
COL13A1-201ENST00000354547 RNF123Q5XPI4 1314 aa26.19■■□□□ 1.78
COL13A1-201ENST00000354547 EFCAB2Q5VUJ9 269 aa26.19■■□□□ 1.78
COL13A1-201ENST00000354547 MYT1LQ9UL68 1186 aa26.19■■□□□ 1.78
COL13A1-201ENST00000354547 TRPM1Q7Z4N2 1603 aa26.18■■□□□ 1.78
COL13A1-201ENST00000354547 AFAP1Q8N556 730 aa26.18■■□□□ 1.78
COL13A1-201ENST00000354547 CDCA7LQ96GN5 454 aa26.17■■□□□ 1.78
COL13A1-201ENST00000354547 TMF1P82094 1093 aa26.16■■□□□ 1.78
COL13A1-201ENST00000354547 PARD3Q8TEW0 1356 aa26.14■■□□□ 1.78
COL13A1-201ENST00000354547 RCAN3Q9UKA8 241 aa26.14■■□□□ 1.78
COL13A1-201ENST00000354547 EXOC6Q8TAG9 804 aa26.14■■□□□ 1.77
COL13A1-201ENST00000354547 ABCC2Q92887 1545 aa26.13■■□□□ 1.77
COL13A1-201ENST00000354547 RRP1P56182 461 aaKnown RBP26.12■■□□□ 1.77
COL13A1-201ENST00000354547 ERBINQ96RT1 1412 aa26.12■■□□□ 1.77
COL13A1-201ENST00000354547 TRAPPC8Q9Y2L5 1435 aa26.12■■□□□ 1.77
COL13A1-201ENST00000354547 MYO5CQ9NQX4 1742 aa26.11■■□□□ 1.77
COL13A1-201ENST00000354547 UNC13BO14795 1591 aa26.11■■□□□ 1.77
COL13A1-201ENST00000354547 GPRASP1Q5JY77 1395 aa26.1■■□□□ 1.77
COL13A1-201ENST00000354547 SPAG9O60271 1321 aaKnown RBP26.1■■□□□ 1.77
COL13A1-201ENST00000354547 E9PCH4 1651 aa26.09■■□□□ 1.77
COL13A1-201ENST00000354547 DUOX2Q9NRD8 1548 aa26.08■■□□□ 1.77
COL13A1-201ENST00000354547 COL17A1Q9UMD9 1497 aaPredicted RBP26.08■■□□□ 1.76
COL13A1-201ENST00000354547 MAST1Q9Y2H9 1570 aa26.07■■□□□ 1.76
COL13A1-201ENST00000354547 PLCH2O75038 1416 aa26.07■■□□□ 1.76
COL13A1-201ENST00000354547 PLIN1O60240 522 aa26.07■■□□□ 1.76
COL13A1-201ENST00000354547 IQGAP3Q86VI3 1631 aa26.05■■□□□ 1.76
COL13A1-201ENST00000354547 SHROOM2Q13796 1616 aa26.03■■□□□ 1.76
COL13A1-201ENST00000354547 PLXNC1O60486 1568 aa26.02■■□□□ 1.76
COL13A1-201ENST00000354547 PRDM15P57071 1507 aaPredicted RBP26.02■■□□□ 1.76
COL13A1-201ENST00000354547 KNSTRNQ9Y448 316 aa26.01■■□□□ 1.75
COL13A1-201ENST00000354547 ADAMTS8Q9UP79 889 aa25.99■■□□□ 1.75
COL13A1-201ENST00000354547 KIF3BO15066 747 aa25.98■■□□□ 1.75
COL13A1-201ENST00000354547 PAK3O75914 559 aaPredicted RBP25.98■■□□□ 1.75
COL13A1-201ENST00000354547 ZCCHC11Q5TAX3 1644 aaKnown RBP25.97■■□□□ 1.75
COL13A1-201ENST00000354547 PDE3BQ13370 1112 aa25.97■■□□□ 1.75
COL13A1-201ENST00000354547 WASHC2CQ9Y4E1 1318 aa25.95■■□□□ 1.75
COL13A1-201ENST00000354547 NPM2Q86SE8 214 aaKnown RBP25.95■■□□□ 1.74
COL13A1-201ENST00000354547 NOP58Q9Y2X3 529 aaKnown RBP25.95■■□□□ 1.74
COL13A1-201ENST00000354547 ANP32AP39687 249 aaKnown RBP25.93■■□□□ 1.74
COL13A1-201ENST00000354547 NBR1Q14596 966 aa25.93■■□□□ 1.74
COL13A1-201ENST00000354547 EIF2AK4Q9P2K8 1649 aaKnown RBP25.93■■□□□ 1.74
COL13A1-201ENST00000354547 ABCC1P33527 1531 aa25.93■■□□□ 1.74
COL13A1-201ENST00000354547 WDR43Q15061 677 aaKnown RBP eCLIP25.92■■□□□ 1.74
COL13A1-201ENST00000354547 ATP10AO60312 1499 aa25.92■■□□□ 1.74
COL13A1-201ENST00000354547 MAGI2Q86UL8 1455 aa25.91■■□□□ 1.74
COL13A1-201ENST00000354547 PPP2R1AP30153 589 aa25.91■■□□□ 1.74
COL13A1-201ENST00000354547 SKAP1Q86WV1 359 aa25.9■■□□□ 1.74
COL13A1-201ENST00000354547 CRBNQ96SW2 442 aa25.88■■□□□ 1.73
COL13A1-201ENST00000354547 CFAP70Q5T0N1 1121 aa25.87■■□□□ 1.73
COL13A1-201ENST00000354547 SCAPERQ9BY12 1400 aa25.86■■□□□ 1.73
COL13A1-201ENST00000354547 LAMC1P11047 1609 aa25.86■■□□□ 1.73
COL13A1-201ENST00000354547 AMER1Q5JTC6 1135 aaPredicted RBP25.85■■□□□ 1.73
COL13A1-201ENST00000354547 CCDC146Q8IYE0 955 aa25.85■■□□□ 1.73
COL13A1-201ENST00000354547 CHGAP10645 457 aaKnown RBP25.85■■□□□ 1.73
COL13A1-201ENST00000354547 WDR7Q9Y4E6 1490 aa25.85■■□□□ 1.73
COL13A1-201ENST00000354547 C20orf194Q5TEA3 1177 aa25.85■■□□□ 1.73
COL13A1-201ENST00000354547 KANK1Q14678 1352 aa25.83■■□□□ 1.73
COL13A1-201ENST00000354547 BLMP54132 1417 aaPredicted RBP25.83■■□□□ 1.73
COL13A1-201ENST00000354547 CDCA8Q53HL2 280 aa25.82■■□□□ 1.72
COL13A1-201ENST00000354547 IPO9Q96P70 1041 aaKnown RBP25.82■■□□□ 1.72
COL13A1-201ENST00000354547 MADDQ8WXG6 1647 aa25.8■■□□□ 1.72
COL13A1-201ENST00000354547 ZBTB47Q9UFB7 747 aaPredicted RBP25.8■■□□□ 1.72
COL13A1-201ENST00000354547 ZFYVE16Q7Z3T8 1539 aa25.79■■□□□ 1.72
COL13A1-201ENST00000354547 SCAF11Q99590 1463 aaKnown RBP25.79■■□□□ 1.72
COL13A1-201ENST00000354547 ADGRF5Q8IZF2 1346 aa25.79■■□□□ 1.72
COL13A1-201ENST00000354547 UHRF1BP1LA0JNW5 1464 aa25.78■■□□□ 1.72
COL13A1-201ENST00000354547 FANCAO15360 1455 aa25.78■■□□□ 1.72
COL13A1-201ENST00000354547 PLEKHH1Q9ULM0 1364 aa25.78■■□□□ 1.72
COL13A1-201ENST00000354547 CLTCL1P53675 1640 aa25.78■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms