RNA–Protein interactions for RNA: ENST00000354537.1

CAPN9-202, Transcript of calpain 9, humanhuman

TSL 1 (best) BASIC

Gene CAPN9, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN9-202ENST00000354537 ARHGEF5Q12774 1597 aa15.23■□□□□ 0.03
CAPN9-202ENST00000354537 ABCC10Q5T3U5 1492 aa15.22■□□□□ 0.03
CAPN9-202ENST00000354537 RCAN3Q9UKA8 241 aa15.22■□□□□ 0.03
CAPN9-202ENST00000354537 MAGI1Q96QZ7 1491 aaPredicted RBP15.22■□□□□ 0.03
CAPN9-202ENST00000354537 CARMIL2Q6F5E8 1435 aa15.22■□□□□ 0.03
CAPN9-202ENST00000354537 CDC42BPAQ5VT25 1732 aa15.22■□□□□ 0.03
CAPN9-202ENST00000354537 ST20-MTHFSA0A0A6YYL1 179 aa15.21■□□□□ 0.03
CAPN9-202ENST00000354537 USP35Q9P2H5 1018 aa15.21■□□□□ 0.02
CAPN9-202ENST00000354537 PLB1Q6P1J6 1458 aa15.21■□□□□ 0.02
CAPN9-202ENST00000354537 LAMC1P11047 1609 aa15.21■□□□□ 0.02
CAPN9-202ENST00000354537 NBR1Q14596 966 aa15.19■□□□□ 0.02
CAPN9-202ENST00000354537 GPRASP1Q5JY77 1395 aa15.19■□□□□ 0.02
CAPN9-202ENST00000354537 ZNF777Q9ULD5 760 aaPredicted RBP15.18■□□□□ 0.02
CAPN9-202ENST00000354537 PLEKHH2Q8IVE3 1493 aa15.18■□□□□ 0.02
CAPN9-202ENST00000354537 TSPY4P0CV99 314 aa15.18■□□□□ 0.02
CAPN9-202ENST00000354537 TSPY10P0CW01 314 aa15.18■□□□□ 0.02
CAPN9-202ENST00000354537 EIF4G3O43432 1585 aaKnown RBP15.18■□□□□ 0.02
CAPN9-202ENST00000354537 ABCA8O94911 1581 aa15.17■□□□□ 0.02
CAPN9-202ENST00000354537 PLEKHD1A6NEE1 506 aa15.17■□□□□ 0.02
CAPN9-202ENST00000354537 TRPM1Q7Z4N2 1603 aa15.17■□□□□ 0.02
CAPN9-202ENST00000354537 SYNJ2O15056 1496 aa15.17■□□□□ 0.02
CAPN9-202ENST00000354537 EXOC6Q8TAG9 804 aa15.17■□□□□ 0.02
CAPN9-202ENST00000354537 BACH2Q9BYV9 841 aa15.17■□□□□ 0.02
CAPN9-202ENST00000354537 PDE4AP27815 886 aa15.16■□□□□ 0.02
CAPN9-202ENST00000354537 RSPH4AQ5TD94 716 aa15.16■□□□□ 0.02
CAPN9-202ENST00000354537 BLMP54132 1417 aaPredicted RBP15.16■□□□□ 0.02
CAPN9-202ENST00000354537 PRAG1Q86YV5 1406 aa15.16■□□□□ 0.02
CAPN9-202ENST00000354537 PER1O15534 1290 aaPredicted RBP15.15■□□□□ 0.02
CAPN9-202ENST00000354537 DCAF11Q8TEB1 546 aa15.15■□□□□ 0.02
CAPN9-202ENST00000354537 NUP160Q12769 1436 aa15.15■□□□□ 0.02
CAPN9-202ENST00000354537 COL17A1Q9UMD9 1497 aaPredicted RBP15.13■□□□□ 0.01
CAPN9-202ENST00000354537 FAM135AQ9P2D6 1515 aa15.13■□□□□ 0.01
CAPN9-202ENST00000354537 PPM1GO15355 546 aaPredicted RBP15.12■□□□□ 0.01
CAPN9-202ENST00000354537 ATP10BO94823 1461 aa15.12■□□□□ 0.01
CAPN9-202ENST00000354537 CNGB1Q14028 1251 aaPredicted RBP15.12■□□□□ 0.01
CAPN9-202ENST00000354537 PRDM15P57071 1507 aaPredicted RBP15.11■□□□□ 0.01
CAPN9-202ENST00000354537 EIF2AK4Q9P2K8 1649 aaKnown RBP15.1■□□□□ 0.01
CAPN9-202ENST00000354537 CCDC141Q6ZP82 1450 aa15.1■□□□□ 0.01
CAPN9-202ENST00000354537 DDRGK1Q96HY6 314 aa15.1■□□□□ 0.01
CAPN9-202ENST00000354537 KDM2AQ9Y2K7 1162 aa15.1■□□□□ 0.01
CAPN9-202ENST00000354537 CCDC144AA2RUR9 1427 aa15.1■□□□□ 0.01
CAPN9-202ENST00000354537 MAST1Q9Y2H9 1570 aa15.1■□□□□ 0.01
CAPN9-202ENST00000354537 JPH4Q96JJ6 628 aa15.09■□□□□ 0.01
CAPN9-202ENST00000354537 CHMP7Q8WUX9 453 aaPredicted RBP15.09■□□□□ 0.01
CAPN9-202ENST00000354537 UNC13BO14795 1591 aa15.09■□□□□ 0.01
CAPN9-202ENST00000354537 ATP10AO60312 1499 aa15.07■□□□□ 0
CAPN9-202ENST00000354537 TESK2Q96S53 571 aa15.05■□□□□ 0
CAPN9-202ENST00000354537 ERBINQ96RT1 1412 aa15.05■□□□□ -0
CAPN9-202ENST00000354537 A2MP01023 1474 aa15.05■□□□□ -0
CAPN9-202ENST00000354537 PREX2Q70Z35 1606 aa15.04■□□□□ -0
CAPN9-202ENST00000354537 SAMD9LQ8IVG5 1584 aa15.04■□□□□ -0
CAPN9-202ENST00000354537 PLA2R1Q13018 1463 aa15.04■□□□□ -0
CAPN9-202ENST00000354537 IQGAP3Q86VI3 1631 aa15.03■□□□□ -0
CAPN9-202ENST00000354537 TMF1P82094 1093 aa15.03■□□□□ -0
CAPN9-202ENST00000354537 HNRNPMP52272 730 aaKnown RBP eCLIP15.02■□□□□ -0
CAPN9-202ENST00000354537 CDCA7LQ96GN5 454 aa15.02■□□□□ -0
CAPN9-202ENST00000354537 NPM2Q86SE8 214 aaKnown RBP15.02□□□□□ -0.01
CAPN9-202ENST00000354537 NEFMP07197 916 aa15.01□□□□□ -0.01
CAPN9-202ENST00000354537 DISP3Q9P2K9 1392 aa15.01□□□□□ -0.01
CAPN9-202ENST00000354537 PLXNC1O60486 1568 aa15.01□□□□□ -0.01
CAPN9-202ENST00000354537 CRBNQ96SW2 442 aa15.01□□□□□ -0.01
CAPN9-202ENST00000354537 CLASP1Q7Z460 1538 aa15.01□□□□□ -0.01
CAPN9-202ENST00000354537 KDM2BQ8NHM5 1336 aa15.01□□□□□ -0.01
CAPN9-202ENST00000354537 CDC42BPBQ9Y5S2 1711 aa15□□□□□ -0.01
CAPN9-202ENST00000354537 SENP3-EIF4A1A0A087X0R7 540 aa15□□□□□ -0.01
CAPN9-202ENST00000354537 CENPQQ7L2Z9 268 aaPredicted RBP15□□□□□ -0.01
CAPN9-202ENST00000354537 NBPF1Q3BBV0 1214 aa15□□□□□ -0.01
CAPN9-202ENST00000354537 PANK3Q9H999 370 aa15□□□□□ -0.01
CAPN9-202ENST00000354537 RNF17Q9BXT8 1623 aaKnown RBP15□□□□□ -0.01
CAPN9-202ENST00000354537 MAGI2Q86UL8 1455 aa14.99□□□□□ -0.01
CAPN9-202ENST00000354537 STAC3Q96MF2 364 aa14.98□□□□□ -0.01
CAPN9-202ENST00000354537 SALL2Q9Y467 1007 aaPredicted RBP14.98□□□□□ -0.01
CAPN9-202ENST00000354537 MYO5CQ9NQX4 1742 aa14.97□□□□□ -0.01
CAPN9-202ENST00000354537 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.97□□□□□ -0.01
CAPN9-202ENST00000354537 CC2D1BQ5T0F9 858 aaKnown RBP14.96□□□□□ -0.01
CAPN9-202ENST00000354537 ZNF521Q96K83 1311 aa14.96□□□□□ -0.02
CAPN9-202ENST00000354537 DUOX2Q9NRD8 1548 aa14.95□□□□□ -0.02
CAPN9-202ENST00000354537 NPC1L1Q9UHC9 1359 aa14.95□□□□□ -0.02
CAPN9-202ENST00000354537 EIF3AQ14152 1382 aaKnown RBP14.95□□□□□ -0.02
CAPN9-202ENST00000354537 PLIN1O60240 522 aa14.94□□□□□ -0.02
CAPN9-202ENST00000354537 CDCA8Q53HL2 280 aa14.94□□□□□ -0.02
CAPN9-202ENST00000354537 LAS1LQ9Y4W2 734 aaKnown RBP14.94□□□□□ -0.02
CAPN9-202ENST00000354537 WDR7Q9Y4E6 1490 aa14.94□□□□□ -0.02
CAPN9-202ENST00000354537 FAM161AQ3B820 660 aa14.93□□□□□ -0.02
CAPN9-202ENST00000354537 PIK3C2GO75747 1445 aa14.93□□□□□ -0.02
CAPN9-202ENST00000354537 ERCC6Q03468 1493 aa14.93□□□□□ -0.02
CAPN9-202ENST00000354537 DUSP27Q5VZP5 1158 aa14.93□□□□□ -0.02
CAPN9-202ENST00000354537 SYNMO15061 1565 aa14.93□□□□□ -0.02
CAPN9-202ENST00000354537 RGL3Q3MIN7 710 aa14.92□□□□□ -0.02
CAPN9-202ENST00000354537 NGEFQ8N5V2 710 aa14.92□□□□□ -0.02
CAPN9-202ENST00000354537 ADAMTS8Q9UP79 889 aa14.92□□□□□ -0.02
CAPN9-202ENST00000354537 SYCP2Q9BX26 1530 aa14.92□□□□□ -0.02
CAPN9-202ENST00000354537 PPP2R1AP30153 589 aa14.91□□□□□ -0.02
CAPN9-202ENST00000354537 GOLGA2Q08379 1002 aa14.91□□□□□ -0.02
CAPN9-202ENST00000354537 IQGAP1P46940 1657 aa14.91□□□□□ -0.02
CAPN9-202ENST00000354537 WDR43Q15061 677 aaKnown RBP eCLIP14.91□□□□□ -0.02
CAPN9-202ENST00000354537 TRMT2AQ8IZ69 625 aaKnown RBP14.91□□□□□ -0.02
CAPN9-202ENST00000354537 SCAPERQ9BY12 1400 aa14.91□□□□□ -0.02
CAPN9-202ENST00000354537 KNSTRNQ9Y448 316 aa14.9□□□□□ -0.02
CAPN9-202ENST00000354537 GSE1Q14687 1217 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms