RNA–Protein interactions for RNA: ENST00000353855.6

DNMT3B-204, Transcript of DNA methyltransferase 3 beta, humanhuman

TSL 5 BASIC

Gene DNMT3B, Length 4,237 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3B-204ENST00000353855 ITPRIPQ8IWB1 547 aa17.95■□□□□ 0.46
DNMT3B-204ENST00000353855 ADAMTS8Q9UP79 889 aa17.94■□□□□ 0.46
DNMT3B-204ENST00000353855 A0A0U1RQG5 324 aaPredicted RBP17.94■□□□□ 0.46
DNMT3B-204ENST00000353855 TRAK2O60296 914 aa17.93■□□□□ 0.46
DNMT3B-204ENST00000353855 CHMP5Q9NZZ3 219 aa17.93■□□□□ 0.46
DNMT3B-204ENST00000353855 PANK1Q8TE04 598 aa17.93■□□□□ 0.46
DNMT3B-204ENST00000353855 BRD4O60885 1362 aaPredicted RBP17.93■□□□□ 0.46
DNMT3B-204ENST00000353855 DDX49Q9Y6V7 483 aaKnown RBP17.93■□□□□ 0.46
DNMT3B-204ENST00000353855 CASKIN1Q8WXD9 1431 aa17.92■□□□□ 0.46
DNMT3B-204ENST00000353855 ZNF644Q9H582 1327 aaPredicted RBP17.92■□□□□ 0.46
DNMT3B-204ENST00000353855 TIAM1Q13009 1591 aa17.92■□□□□ 0.46
DNMT3B-204ENST00000353855 ZMYND15Q9H091 742 aa17.91■□□□□ 0.46
DNMT3B-204ENST00000353855 MRE11P49959 708 aa17.91■□□□□ 0.46
DNMT3B-204ENST00000353855 RBM10P98175 930 aaKnown RBP17.91■□□□□ 0.46
DNMT3B-204ENST00000353855 CALD1Q05682 793 aaKnown RBP17.91■□□□□ 0.46
DNMT3B-204ENST00000353855 MYOM3Q5VTT5 1437 aa17.9■□□□□ 0.46
DNMT3B-204ENST00000353855 CGNL1Q0VF96 1302 aa17.9■□□□□ 0.46
DNMT3B-204ENST00000353855 MORC1Q86VD1 984 aa17.89■□□□□ 0.45
DNMT3B-204ENST00000353855 APBB1O00213 710 aa17.89■□□□□ 0.45
DNMT3B-204ENST00000353855 FOXD4L5Q5VV16 416 aaPredicted RBP17.88■□□□□ 0.45
DNMT3B-204ENST00000353855 FOXD4L4Q8WXT5 416 aaPredicted RBP17.88■□□□□ 0.45
DNMT3B-204ENST00000353855 PEG3Q9GZU2 1588 aa17.88■□□□□ 0.45
DNMT3B-204ENST00000353855 HFM1A2PYH4 1435 aa17.88■□□□□ 0.45
DNMT3B-204ENST00000353855 CDK11BP21127 795 aaKnown RBP17.88■□□□□ 0.45
DNMT3B-204ENST00000353855 BCAR3O75815 825 aa17.87■□□□□ 0.45
DNMT3B-204ENST00000353855 WASHC2CQ9Y4E1 1318 aa17.86■□□□□ 0.45
DNMT3B-204ENST00000353855 SMC4Q9NTJ3 1288 aa17.86■□□□□ 0.45
DNMT3B-204ENST00000353855 R3HCC1Q9Y3T6 440 aaKnown RBP17.85■□□□□ 0.45
DNMT3B-204ENST00000353855 NCOA2Q15596 1464 aa17.85■□□□□ 0.45
DNMT3B-204ENST00000353855 U2AF1L5P0DN76 240 aaPredicted RBP17.85■□□□□ 0.45
DNMT3B-204ENST00000353855 U2AF1Q01081 240 aaKnown RBP eCLIP17.85■□□□□ 0.456e-10■■■■□ 19.3
DNMT3B-204ENST00000353855 C22orf23Q9BZE7 217 aa17.85■□□□□ 0.45
DNMT3B-204ENST00000353855 FYCO1Q9BQS8 1478 aa17.85■□□□□ 0.45
DNMT3B-204ENST00000353855 RRP9O43818 475 aaKnown RBP17.84■□□□□ 0.45
DNMT3B-204ENST00000353855 E9PSI1 815 aa17.84■□□□□ 0.45
DNMT3B-204ENST00000353855 ESPNB1AK53 854 aa17.84■□□□□ 0.45
DNMT3B-204ENST00000353855 CASC1Q6TDU7 716 aa17.84■□□□□ 0.45
DNMT3B-204ENST00000353855 HMGXB3Q12766 1538 aa17.84■□□□□ 0.45
DNMT3B-204ENST00000353855 NAIPQ13075 1403 aa17.83■□□□□ 0.45
DNMT3B-204ENST00000353855 ANKRD30AQ9BXX3 1397 aa17.83■□□□□ 0.44
DNMT3B-204ENST00000353855 GAPVD1Q14C86 1478 aa17.83■□□□□ 0.44
DNMT3B-204ENST00000353855 UNC13AQ9UPW8 1703 aa17.82■□□□□ 0.44
DNMT3B-204ENST00000353855 PTMSP20962 102 aa17.82■□□□□ 0.44
DNMT3B-204ENST00000353855 MCM4P33991 863 aa17.81■□□□□ 0.44
DNMT3B-204ENST00000353855 KIAA2012Q0VF49 1180 aa17.81■□□□□ 0.44
DNMT3B-204ENST00000353855 NCOA1Q15788 1441 aa17.8■□□□□ 0.44
DNMT3B-204ENST00000353855 PODXL2Q9NZ53 605 aa17.8■□□□□ 0.44
DNMT3B-204ENST00000353855 CHAF1AQ13111 956 aaPredicted RBP17.8■□□□□ 0.44
DNMT3B-204ENST00000353855 GRPEL1Q9HAV7 217 aa17.8■□□□□ 0.44
DNMT3B-204ENST00000353855 FOXD4L6Q3SYB3 417 aaPredicted RBP17.79■□□□□ 0.44
DNMT3B-204ENST00000353855 FOXD4L3Q6VB84 417 aaPredicted RBP17.79■□□□□ 0.44
DNMT3B-204ENST00000353855 SKOR2Q2VWA4 1001 aaPredicted RBP17.78■□□□□ 0.44
DNMT3B-204ENST00000353855 NASPP49321 788 aaPredicted RBP17.78■□□□□ 0.44
DNMT3B-204ENST00000353855 KIAA1211Q6ZU35 1233 aa17.78■□□□□ 0.44
DNMT3B-204ENST00000353855 PANK2Q9BZ23 570 aa17.78■□□□□ 0.44
DNMT3B-204ENST00000353855 NOL8Q76FK4 1167 aaKnown RBP17.77■□□□□ 0.44
DNMT3B-204ENST00000353855 HNRNPMP52272 730 aaKnown RBP eCLIP17.77■□□□□ 0.449e-7■■□□□ 12.9
DNMT3B-204ENST00000353855 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.77■□□□□ 0.43
DNMT3B-204ENST00000353855 PDZRN3Q9UPQ7 1066 aa17.77■□□□□ 0.43
DNMT3B-204ENST00000353855 NBPF1Q3BBV0 1214 aa17.75■□□□□ 0.43
DNMT3B-204ENST00000353855 ERCC6Q03468 1493 aa17.75■□□□□ 0.43
DNMT3B-204ENST00000353855 RRAGDQ9NQL2 400 aaPredicted RBP17.74■□□□□ 0.43
DNMT3B-204ENST00000353855 TPM2P07951 284 aa17.74■□□□□ 0.43
DNMT3B-204ENST00000353855 SAFB2Q14151 953 aaKnown RBP eCLIP17.74■□□□□ 0.43
DNMT3B-204ENST00000353855 ANKRD45Q5TZF3 282 aa17.73■□□□□ 0.43
DNMT3B-204ENST00000353855 LNPKQ9C0E8 428 aa17.73■□□□□ 0.43
DNMT3B-204ENST00000353855 IPO8O15397 1037 aaKnown RBP17.73■□□□□ 0.43
DNMT3B-204ENST00000353855 CARMIL2Q6F5E8 1435 aa17.73■□□□□ 0.43
DNMT3B-204ENST00000353855 BIVM-ERCC5R4GMW8 1640 aa17.72■□□□□ 0.43
DNMT3B-204ENST00000353855 EFCAB5A4FU69 1503 aa17.72■□□□□ 0.43
DNMT3B-204ENST00000353855 XRCC6P12956 609 aaKnown RBP eCLIP17.72■□□□□ 0.43
DNMT3B-204ENST00000353855 ZKSCAN2Q63HK3 967 aa17.72■□□□□ 0.43
DNMT3B-204ENST00000353855 POLA1P09884 1462 aaPredicted RBP17.71■□□□□ 0.43
DNMT3B-204ENST00000353855 NESP48681 1621 aa17.71■□□□□ 0.43
DNMT3B-204ENST00000353855 PCF11O94913 1555 aaKnown RBP17.71■□□□□ 0.43
DNMT3B-204ENST00000353855 MCTP1Q6DN14 999 aa17.71■□□□□ 0.43
DNMT3B-204ENST00000353855 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.71■□□□□ 0.433e-7■■■■□ 22
DNMT3B-204ENST00000353855 DRC7Q8IY82 874 aa17.7■□□□□ 0.42
DNMT3B-204ENST00000353855 RNF214Q8ND24 703 aa17.7■□□□□ 0.42
DNMT3B-204ENST00000353855 TBC1D2Q9BYX2 928 aa17.69■□□□□ 0.42
DNMT3B-204ENST00000353855 MAP3K1Q13233 1512 aa17.69■□□□□ 0.42
DNMT3B-204ENST00000353855 PPP2R1AP30153 589 aa17.69■□□□□ 0.42
DNMT3B-204ENST00000353855 C8orf34Q49A92 452 aa17.69■□□□□ 0.42
DNMT3B-204ENST00000353855 JPH4Q96JJ6 628 aa17.68■□□□□ 0.42
DNMT3B-204ENST00000353855 TOPBP1Q92547 1522 aa17.68■□□□□ 0.42
DNMT3B-204ENST00000353855 CAVIN1Q6NZI2 390 aaKnown RBP17.68■□□□□ 0.42
DNMT3B-204ENST00000353855 MPNDQ8N594 471 aa17.68■□□□□ 0.42
DNMT3B-204ENST00000353855 CHMP4BQ9H444 224 aaKnown RBP17.68■□□□□ 0.42
DNMT3B-204ENST00000353855 DZIP1LQ8IYY4 767 aaKnown RBP17.67■□□□□ 0.42
DNMT3B-204ENST00000353855 CCDC144AA2RUR9 1427 aa17.67■□□□□ 0.42
DNMT3B-204ENST00000353855 AQRO60306 1485 aaKnown RBP eCLIP17.67■□□□□ 0.428e-7■■■■□ 22.3
DNMT3B-204ENST00000353855 ELL2O00472 640 aaPredicted RBP17.66■□□□□ 0.42
DNMT3B-204ENST00000353855 PTPRKQ15262 1439 aa17.65■□□□□ 0.42
DNMT3B-204ENST00000353855 STAG3Q9UJ98 1225 aa17.64■□□□□ 0.41
DNMT3B-204ENST00000353855 NPM1P06748 294 aaKnown RBP eCLIP17.64■□□□□ 0.41
DNMT3B-204ENST00000353855 CLCN1P35523 988 aa17.64■□□□□ 0.41
DNMT3B-204ENST00000353855 IGHDP01880 384 aa17.63■□□□□ 0.41
DNMT3B-204ENST00000353855 SYAP1Q96A49 352 aaPredicted RBP17.63■□□□□ 0.41
DNMT3B-204ENST00000353855 PDE3AQ14432 1141 aa17.63■□□□□ 0.41
DNMT3B-204ENST00000353855 ANKRD30BQ9BXX2 1392 aa17.63■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms