RNA–Protein interactions for RNA: ENST00000351691.9

TRAF3-202, Transcript of TNF receptor associated factor 3, humanhuman

TSL 1 (best) BASIC

Gene TRAF3, Length 2,239 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-202ENST00000351691 ZNF777Q9ULD5 760 aaPredicted RBP19.92■□□□□ 0.78
TRAF3-202ENST00000351691 C9orf84Q5VXU9 1444 aa19.91■□□□□ 0.78
TRAF3-202ENST00000351691 BACH2Q9BYV9 841 aa19.9■□□□□ 0.78
TRAF3-202ENST00000351691 ARID4BQ4LE39 1312 aaPredicted RBP19.9■□□□□ 0.78
TRAF3-202ENST00000351691 PDE4AP27815 886 aa19.89■□□□□ 0.77
TRAF3-202ENST00000351691 DDRGK1Q96HY6 314 aa19.88■□□□□ 0.77
TRAF3-202ENST00000351691 UHRF1BP1Q6BDS2 1440 aa19.88■□□□□ 0.77
TRAF3-202ENST00000351691 PKD2Q13563 968 aa19.87■□□□□ 0.77
TRAF3-202ENST00000351691 RTN4Q9NQC3 1192 aaKnown RBP19.87■□□□□ 0.77
TRAF3-202ENST00000351691 ARHGEF12Q9NZN5 1544 aa19.87■□□□□ 0.77
TRAF3-202ENST00000351691 OSCARQ8IYS5 282 aa19.86■□□□□ 0.77
TRAF3-202ENST00000351691 ABCC2Q92887 1545 aa19.86■□□□□ 0.77
TRAF3-202ENST00000351691 TSPY4P0CV99 314 aa19.86■□□□□ 0.77
TRAF3-202ENST00000351691 TSPY10P0CW01 314 aa19.86■□□□□ 0.77
TRAF3-202ENST00000351691 RSPH4AQ5TD94 716 aa19.86■□□□□ 0.77
TRAF3-202ENST00000351691 RRP1P56182 461 aaKnown RBP19.84■□□□□ 0.77
TRAF3-202ENST00000351691 PNISRQ8TF01 805 aaKnown RBP19.84■□□□□ 0.77
TRAF3-202ENST00000351691 PREX2Q70Z35 1606 aa19.84■□□□□ 0.77
TRAF3-202ENST00000351691 LRPPRCP42704 1394 aaKnown RBP19.84■□□□□ 0.77
TRAF3-202ENST00000351691 GSE1Q14687 1217 aa19.83■□□□□ 0.77
TRAF3-202ENST00000351691 LAS1LQ9Y4W2 734 aaKnown RBP19.83■□□□□ 0.77
TRAF3-202ENST00000351691 NUP155O75694 1391 aa19.82■□□□□ 0.76
TRAF3-202ENST00000351691 ZCCHC11Q5TAX3 1644 aaKnown RBP19.82■□□□□ 0.76
TRAF3-202ENST00000351691 RALGAPBQ86X10 1494 aa19.81■□□□□ 0.76
TRAF3-202ENST00000351691 ROCK2O75116 1388 aaKnown RBP19.81■□□□□ 0.76
TRAF3-202ENST00000351691 KTN1Q86UP2 1357 aaKnown RBP19.81■□□□□ 0.76
TRAF3-202ENST00000351691 CCDC141Q6ZP82 1450 aa19.81■□□□□ 0.76
TRAF3-202ENST00000351691 KDM5CP41229 1560 aa19.81■□□□□ 0.76
TRAF3-202ENST00000351691 NPM2Q86SE8 214 aaKnown RBP19.8■□□□□ 0.76
TRAF3-202ENST00000351691 MAST1Q9Y2H9 1570 aa19.79■□□□□ 0.76
TRAF3-202ENST00000351691 USP47Q96K76 1375 aa19.79■□□□□ 0.76
TRAF3-202ENST00000351691 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.79■□□□□ 0.76
TRAF3-202ENST00000351691 CDC42BPBQ9Y5S2 1711 aa19.79■□□□□ 0.76
TRAF3-202ENST00000351691 KIF15Q9NS87 1388 aa19.79■□□□□ 0.76
TRAF3-202ENST00000351691 SAMD9LQ8IVG5 1584 aa19.78■□□□□ 0.76
TRAF3-202ENST00000351691 BCORL1Q5H9F3 1711 aa19.78■□□□□ 0.76
TRAF3-202ENST00000351691 BRD4O60885 1362 aaPredicted RBP19.76■□□□□ 0.75
TRAF3-202ENST00000351691 PDE3BQ13370 1112 aa19.75■□□□□ 0.75
TRAF3-202ENST00000351691 EXOC6Q8TAG9 804 aa19.75■□□□□ 0.75
TRAF3-202ENST00000351691 BRPF3Q9ULD4 1205 aa19.74■□□□□ 0.75
TRAF3-202ENST00000351691 HNRNPMP52272 730 aaKnown RBP eCLIP19.73■□□□□ 0.757e-7■■□□□ 13.5
TRAF3-202ENST00000351691 PLEKHH2Q8IVE3 1493 aa19.73■□□□□ 0.75
TRAF3-202ENST00000351691 TMC1Q8TDI8 760 aa19.72■□□□□ 0.75
TRAF3-202ENST00000351691 RCAN3Q9UKA8 241 aa19.72■□□□□ 0.75
TRAF3-202ENST00000351691 UHRF1BP1LA0JNW5 1464 aa19.72■□□□□ 0.75
TRAF3-202ENST00000351691 RSPH6AQ9H0K4 717 aa19.72■□□□□ 0.75
TRAF3-202ENST00000351691 UNC13BO14795 1591 aa19.71■□□□□ 0.75
TRAF3-202ENST00000351691 NFKBIBQ15653 356 aa19.71■□□□□ 0.75
TRAF3-202ENST00000351691 TTC37Q6PGP7 1564 aa19.71■□□□□ 0.75
TRAF3-202ENST00000351691 FAM135AQ9P2D6 1515 aa19.7■□□□□ 0.74
TRAF3-202ENST00000351691 PLXNC1O60486 1568 aa19.69■□□□□ 0.74
TRAF3-202ENST00000351691 FAM43AQ8N2R8 423 aa19.68■□□□□ 0.74
TRAF3-202ENST00000351691 INSRP06213 1382 aa19.68■□□□□ 0.74
TRAF3-202ENST00000351691 RALBP1Q15311 655 aa19.67■□□□□ 0.74
TRAF3-202ENST00000351691 MYO5CQ9NQX4 1742 aa19.67■□□□□ 0.74
TRAF3-202ENST00000351691 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.67■□□□□ 0.74
TRAF3-202ENST00000351691 MYBBP1AQ9BQG0 1328 aaKnown RBP19.66■□□□□ 0.74
TRAF3-202ENST00000351691 ARHGAP5Q13017 1502 aa19.66■□□□□ 0.74
TRAF3-202ENST00000351691 ZMYM4Q5VZL5 1548 aa19.66■□□□□ 0.74
TRAF3-202ENST00000351691 ZNF326Q5BKZ1 582 aaKnown RBP19.66■□□□□ 0.74
TRAF3-202ENST00000351691 SYCP2Q9BX26 1530 aa19.65■□□□□ 0.74
TRAF3-202ENST00000351691 FRAT1Q92837 279 aaPredicted RBP19.65■□□□□ 0.74
TRAF3-202ENST00000351691 CARD11Q9BXL7 1154 aa19.65■□□□□ 0.74
TRAF3-202ENST00000351691 E9PCH4 1651 aa19.65■□□□□ 0.74
TRAF3-202ENST00000351691 IQGAP3Q86VI3 1631 aa19.63■□□□□ 0.73
TRAF3-202ENST00000351691 LAMC1P11047 1609 aa19.61■□□□□ 0.73
TRAF3-202ENST00000351691 DUOX2Q9NRD8 1548 aa19.6■□□□□ 0.73
TRAF3-202ENST00000351691 RIMBP3CA6NJZ7 1639 aa19.6■□□□□ 0.73
TRAF3-202ENST00000351691 RIMBP3BA6NNM3 1639 aa19.6■□□□□ 0.73
TRAF3-202ENST00000351691 RIMBP3Q9UFD9 1639 aa19.6■□□□□ 0.73
TRAF3-202ENST00000351691 CCDC144AA2RUR9 1427 aa19.6■□□□□ 0.73
TRAF3-202ENST00000351691 TRPM1Q7Z4N2 1603 aa19.6■□□□□ 0.73
TRAF3-202ENST00000351691 DCAF11Q8TEB1 546 aa19.58■□□□□ 0.73
TRAF3-202ENST00000351691 DAXXQ9UER7 740 aaPredicted RBP19.58■□□□□ 0.73
TRAF3-202ENST00000351691 ATP10AO60312 1499 aa19.58■□□□□ 0.72
TRAF3-202ENST00000351691 MAGI2Q86UL8 1455 aa19.58■□□□□ 0.72
TRAF3-202ENST00000351691 PRAG1Q86YV5 1406 aa19.58■□□□□ 0.72
TRAF3-202ENST00000351691 ERBINQ96RT1 1412 aa19.57■□□□□ 0.72
TRAF3-202ENST00000351691 GPRASP1Q5JY77 1395 aa19.56■□□□□ 0.72
TRAF3-202ENST00000351691 PLCH2O75038 1416 aa19.55■□□□□ 0.72
TRAF3-202ENST00000351691 EIF5BO60841 1220 aaKnown RBP19.55■□□□□ 0.72
TRAF3-202ENST00000351691 KDM2AQ9Y2K7 1162 aa19.55■□□□□ 0.72
TRAF3-202ENST00000351691 EIF2AK4Q9P2K8 1649 aaKnown RBP19.54■□□□□ 0.72
TRAF3-202ENST00000351691 PLA2R1Q13018 1463 aa19.54■□□□□ 0.72
TRAF3-202ENST00000351691 WDR7Q9Y4E6 1490 aa19.54■□□□□ 0.72
TRAF3-202ENST00000351691 ST20-MTHFSA0A0A6YYL1 179 aa19.53■□□□□ 0.72
TRAF3-202ENST00000351691 POLR3GLQ9BT43 218 aa19.53■□□□□ 0.72
TRAF3-202ENST00000351691 KDM2BQ8NHM5 1336 aa19.53■□□□□ 0.72
TRAF3-202ENST00000351691 NLRP13Q86W25 1043 aa19.52■□□□□ 0.72
TRAF3-202ENST00000351691 ARAP3Q8WWN8 1544 aa19.51■□□□□ 0.71
TRAF3-202ENST00000351691 FAM161AQ3B820 660 aa19.51■□□□□ 0.71
TRAF3-202ENST00000351691 PARD3Q8TEW0 1356 aa19.51■□□□□ 0.71
TRAF3-202ENST00000351691 ASXL2Q76L83 1435 aa19.51■□□□□ 0.71
TRAF3-202ENST00000351691 EFCAB2Q5VUJ9 269 aa19.51■□□□□ 0.71
TRAF3-202ENST00000351691 CENPQQ7L2Z9 268 aaPredicted RBP19.51■□□□□ 0.71
TRAF3-202ENST00000351691 BLMP54132 1417 aaPredicted RBP19.5■□□□□ 0.71
TRAF3-202ENST00000351691 A2MP01023 1474 aa19.5■□□□□ 0.71
TRAF3-202ENST00000351691 ABCC1P33527 1531 aa19.5■□□□□ 0.71
TRAF3-202ENST00000351691 PRDM15P57071 1507 aaPredicted RBP19.49■□□□□ 0.71
TRAF3-202ENST00000351691 CRBNQ96SW2 442 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms